Gene

KWMTBOMO08665

Pre Gene Modal

BGIBMGA007644

Annotation

PREDICTED:_ectin-like_[Papilio_xuthus]

Location

Bomo_Chr15(+):1772327-1787991      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.564 Nuclear   Reliability : 2.072

CDS

ATGACGACACGCGGCCGGGACGACACTGTCGAGTTGTTGCCGCTCAAATCCGCTCTGGTCAACAACAATTACAAGGAAGATGATGTATACTACGCTCCCAATCAGGCCGTAGTTGACAATCCATCGAGCGGCAGCTCCTACGAGTACACGTTCCTGTCAAAACGAACGCCTGCTTCTAAACGATTATTGTCGTCCCGAAGCACGCAGCCGTCGCCGAGCCCACTGGTGACGCTGTGCGGGGCGCCGCCCCCGTCCAGGAAGCGAGAGGAGCTGGCTGCTCTTGCTAACCTGAGAAAGAAAGTAGCGCCAGCATTGCTCAAGTCCGACAGAAACTGCAAGAACAACAATAACAATCAGAAAGCAGAGGCGACAGTAGTGCAACTCGACAACAGACCTAAATTACTGCAAAGGGTTCTGCAGAACAGACCGGTGAGTATGGTGGTGCAGTGGAGCGAGGTGCGTACGGCGTGGCAGGACAGCGACTTCATAACCGAGTGCTTGTGTTGGCATAACGTCTACCGACAGAGGCACGGCGCGCCCCAGCTTTATATGGCCCCAGAGCTCTGCGATTACGCTCAAGCGTGGGCCAACCATCTCGCTCACACCAACAAGTTCCACTATAGGAACGACAGAGACGTAGGACAGAATCTATATCAAAGGCCCGTTAGCGCTCTACAACCAGAGATTACGGGGCAAGAAGTCTCGTCGTACTGGTACGCGGCAGTTAAGCAATACAATTTCTTTAAGGAATCCGATGTTCTTCATGCAAACGTTAACGCTGGTCACTTCACACAAATGGTATGGATTTCGACTCGTTATTTCGGCGTGGGTAAGGCCAGATCCCGCGCTGGCAAGGTCATAGTGGTCGCAAACTACTCTCCGCCCGGCAATATATCCGGTCGTTTTGAGACGAACGTCTTACCGCCGTTGCCGGATAGCTTCCCGGATCTGACACCGCTTCCGGAACACTGA

Protein

MTTRGRDDTVELLPLKSALVNNNYKEDDVYYAPNQAVVDNPSSGSSYEYTFLSKRTPASKRLLSSRSTQPSPSPLVTLCGAPPPSRKREELAALANLRKKVAPALLKSDRNCKNNNNNQKAEATVVQLDNRPKLLQRVLQNRPVSMVVQWSEVRTAWQDSDFITECLCWHNVYRQRHGAPQLYMAPELCDYAQAWANHLAHTNKFHYRNDRDVGQNLYQRPVSALQPEITGQEVSSYWYAAVKQYNFFKESDVLHANVNAGHFTQMVWISTRYFGVGKARSRAGKVIVVANYSPPGNISGRFETNVLPPLPDSFPDLTPLPEH

Similarity

Belongs to the CRISP family.

Uniprot

H9JDP7   A0A212F8T2   A0A437BXR2   A0A154PNP5   A0A026WRT6   A0A0N1ISY3   + More
A0A310SK55   E2AKV2   A0A151XJV0   A0A195C0T6   E9IAX9   A0A151IVE7   A0A2A3EEY7   A0A195BGN1   A0A158NIE1   A0A088A6N1   A0A0C9PZA7   D6WAD1   A0A151K1A5   A0A2J7RM14   A0A1B0DLV8   E2BUW4   A0A0L7R4Y3   F4WZZ5   A0A1B0CP20   A0A182G5H2   Q1DGU8   A0A182QUC1   A0A2C9H5R1   Q7Q5D8   A0A182YNS6   A0A182LKR5   A0A182G7U9   W5J4G6   A0A2M4D0B8   A0A182LYV7   A0A182FGJ2   A0A182RR51   A0A2S2QDB1   J9L8T8  

Pubmed

19121390    22118469    24508170    30249741    20798317    21282665    + More
21347285    18362917    19820115    21719571    26483478    17510324    12364791    14747013    17210077    25244985    20966253    20920257    23761445   

EMBL

BABH01003224    BABH01003225    AGBW02009681    OWR50130.1    RSAL01000001    RVE55194.1    + More
KQ434998    KZC13347.1    KK107119    QOIP01000009    EZA58737.1    RLU18381.1    KQ435989    KOX67724.1    KQ761783    OAD57066.1    GL440413    EFN65941.1    KQ982068    KYQ60558.1    KQ978379    KYM94499.1    GL762091    EFZ22267.1    KQ980901    KYN11680.1    KZ288263    PBC30297.1    KQ976491    KYM83308.1    ADTU01016664    ADTU01016665    ADTU01016666    GBYB01006858    JAG76625.1    KQ971312    EEZ98620.1    KQ981178    KYN45264.1    NEVH01002577    PNF41883.1    AJVK01016572    AJVK01016573    GL450772    EFN80501.1    KQ414654    KOC65879.1    GL888483    EGI60225.1    AJWK01021331    JXUM01043712    KQ561372    KXJ78815.1    CH900350    CH478439    EAT32378.1    EAT32985.1    AXCN02000461    AAAB01008960    EAA11558.4    JXUM01000604    KQ560108    KXJ84493.1    ADMH02002114    ETN58806.1    GGFL01006370    MBW70548.1    AXCM01005413    GGMS01006480    MBY75683.1    ABLF02039451   

Proteomes

UP000005204    UP000007151    UP000283053    UP000076502    UP000053097    UP000279307    + More
UP000053105    UP000000311    UP000075809    UP000078542    UP000078492    UP000242457    UP000078540    UP000005205    UP000005203    UP000007266    UP000078541    UP000235965    UP000092462    UP000008237    UP000053825    UP000007755    UP000092461    UP000069940    UP000249989    UP000008820    UP000075886    UP000075903    UP000007062    UP000076408    UP000075882    UP000000673    UP000075883    UP000069272    UP000075900    UP000007819   

PRIDE

H9JDP7   

Pfam

PF00188   CAP

Interpro

IPR035940   CAP_sf        + More
IPR018244   Allrgn_V5/Tpx1_CS       
IPR014044   CAP_domain       
IPR002413   V5_allergen-like       
IPR034113   SCP_GAPR1-like       
IPR001283   CRISP-related       

SUPFAM

SSF55797   SSF55797       

Gene 3D

3.40.33.10    

CDD

cd05382  SCP_GAPR-1_like

ProteinModelPortal

H9JDP7   A0A212F8T2   A0A437BXR2   A0A154PNP5   A0A026WRT6   A0A0N1ISY3   + More
A0A310SK55   E2AKV2   A0A151XJV0   A0A195C0T6   E9IAX9   A0A151IVE7   A0A2A3EEY7   A0A195BGN1   A0A158NIE1   A0A088A6N1   A0A0C9PZA7   D6WAD1   A0A151K1A5   A0A2J7RM14   A0A1B0DLV8   E2BUW4   A0A0L7R4Y3   F4WZZ5   A0A1B0CP20   A0A182G5H2   Q1DGU8   A0A182QUC1   A0A2C9H5R1   Q7Q5D8   A0A182YNS6   A0A182LKR5   A0A182G7U9   W5J4G6   A0A2M4D0B8   A0A182LYV7   A0A182FGJ2   A0A182RR51   A0A2S2QDB1   J9L8T8  

PDB

4AIW     E-value=3.72028e-19,     Score=232

KEGG

101742505    no KO assigned | (RefSeq) uncharacterized LOC101742505

GO

GO:0005576   GO:0005615   GO:0019887   GO:0006418   GO:0000166   GO:0004820   GO:0005737   GO:0006426   GO:0003676   GO:0016876   GO:0043039  

PANTHER

PTHR10334  

Length:

323

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04294

Exp number, first 60 AAs:

0

Total prob of N-in:

0.10519

outside

1  -  323

 

 

Pi

182.523592

Theta

183.012771

Tajima's D

-1.185977

CLR

13057.274158

CSRT

0.107394630268487

Interpretation

Uncertain