Gene

KWMTBOMO08661

Pre Gene Modal

BGIBMGA007943

Annotation

PREDICTED:_uncharacterized_protein_LOC101742795_[Bombyx_mori]

Location

Bomo_Chr15(-):1732792-1736022      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.246 Mitochondrial   Reliability : 1.231

CDS

ATGGTACTAAACGCAGCCGTGCAGATGTTGAGGGAAGCTGATGAGCTGAAACAAAATATATTAAATTTTAAGAGTGGAACATCAATGCTTCAAGATCAAAATATATGGACAACACAACAACAGTTACAAAAGATATACCAAAAAGTGTTAGTTTTAGACCTGGATTATGCATTGGAGAAGAAAGTTGAACAAGATTTGTGGAATGTTGGTTTCAAACAACAAATTGAAGCCCTGCAAGCCATATCCAAGGATAGAAAGAATCCACAACGCAGTGAGGGTCAAGCGATGCTTTCACTGGTGCTGCAAGCCGCCGCCGGCTTCTATCTATGTTTGCTGCACCAGATATGCACAACATTTAAATTAGATTTACCGTTCAGACGTCGCACATCCCTGGTGGGCTGGGTGGAGGGGTGGGGTGCGGGCGCGGGGGCGGGCGAGCTGACGGCGGGCGGCCGGCTCCCCGCCGCCCCCGCCGCGCGGTACATCTGTCAGCACTGCCTCGTGCATCTAGGAGACTTGGCGCGGTACAGACAACAGCTTAGAGTCGCGCATACCTTCTACAGGTAA

Protein

MVLNAAVQMLREADELKQNILNFKSGTSMLQDQNIWTTQQQLQKIYQKVLVLDLDYALEKKVEQDLWNVGFKQQIEALQAISKDRKNPQRSEGQAMLSLVLQAAAGFYLCLLHQICTTFKLDLPFRRRTSLVGWVEGWGAGAGAGELTAGGRLPAAPAARYICQHCLVHLGDLARYRQQLRVAHTFYR

Uniprot

A0A437BXN4   A0A2A4K7W5   A0A0N1ICP6   A0A194PW79   A0A2H1WPG9   A0A212F8R9   + More
H9JEJ6   A0A232F8A2   K7IQ52   A0A0B7B4L9   D6WCQ2   A0A433UCE7   A0A1B6L3W1   A0A1B6J201   A0A1S3I980   A0A1Y1K6F6   A0A3B3S138   A0A2C9LEP2   A0A3P9Q1U8   A0A2T7NMZ8   U4ULK1   A0A1S3R2Q9   A0A3B3CYI8   A0A3P9L225   N6TST5   A0A1S3R1A1   A0A1S3R1A6   A0A3B1JD08   A0A2J7RQ46   A0A3B4C1Y3   A0A3P9Q277   A0A3B4BZ41   A0A3P9L1W9   A0A3Q1HQJ6   A0A3P9L1U9   A0A3B1K2V4   A0A3B3B8G8   A0A3B3I6P3   A0A3P9JAA9   A0A3Q1J3P7   A0A3P9JAE8   A0A087YMU0   H2LSV7   A0A3P9JAB5   A0A3B3HWQ4   G3NA05   A0A3Q3N6P0   A0A060VTY3   A0A147ARF6   A0A3Q1CFL9   A0A3P8XYZ8   A0A3P8SFX7   A0A3P8ZUR7   A0A3Q3N6Q0   A0A2U3ZDB1   A0A1W4ZZU1   A0A287B230   M3ZY43   A0A1W5A8T1   A0A3Q3IJ12   A0A3B4V0G6   A0A1W5A856   A0A3Q1CFK3   Q1LVF3   A0A3P8Y1Y6   A0A146P779   A0A3P8SEK5   A0A3Q3IC17   A0A3Q3N6R4   A0A3B3TJ39   A0A3P9CDI2   A0A2D0R8E3   A0A1B6BZA1   A0A3Q2QJ15   K9IPW7   A0A2I2UYZ3   A0A0U1RRU7   F7B512   A0A3B3Y866   B3DI22   A0A3Q3IJ48   A0A3Q7PI65   A0A0R4IJJ6   A0A2K5UXC6   A0A3Q3IC24   I3N8D9   A0A2D0R8D7   A0A3P9CDZ9   A0A2Y9DE78   A0A2K6Q509   A0A3Q2UWX2   A0A287B3B8   H3CAU2   A0A2Y9PV00   A0A2U4CR72   A0A3B4FLK5   A0A3Q2WB98   A0A091D5K4   A0A1S3K3N0  

Pubmed

26354079    22118469    19121390    28648823    20075255    18362917    + More
19820115    28004739    29240929    15562597    23537049    29451363    17554307    25329095    24755649    25069045    30723633    23542700    23594743    25186727    17975172    15057822    19892987    25362486    15496914   

EMBL

RSAL01000001    RVE55198.1    NWSH01000087    PCG79750.1    KQ459781    KPJ19978.1    + More
KQ459596    KPI95390.1    ODYU01010079    SOQ54928.1    AGBW02009681    OWR50134.1    BABH01003227    BABH01003228    NNAY01000751    OXU26689.1    HACG01041083    CEK87948.1    KQ971317    EEZ97800.2    RQTK01000011    RUS91468.1    GEBQ01021627    JAT18350.1    GECU01027300    GECU01014497    JAS80406.1    JAS93209.1    GEZM01095918    JAV55265.1    PZQS01000011    PVD22532.1    KB632273    ERL91066.1    APGK01053266    APGK01053267    KB741223    ENN72335.1    NEVH01001348    PNF42949.1    AYCK01018962    AYCK01018963    FR904263    CDQ56449.1    GCES01005558    JAR80765.1    AEMK02000070    DQIR01222368    HDB77845.1    BX681417    GCES01147443    GCES01147132    JAQ39190.1    GEDC01030701    GEDC01016210    JAS06597.1    JAS21088.1    GABZ01003853    JAA49672.1    AANG04001043    AABR07021402    AABR07021403    AABR07021404    BC162970    AAI62970.1    AQIA01000989    AQIA01000990    AQIA01000991    AGTP01014845    DQIR01222367    HDB77844.1    KN123200    KFO26332.1   

Proteomes

UP000283053    UP000218220    UP000053240    UP000053268    UP000007151    UP000005204    + More
UP000215335    UP000002358    UP000007266    UP000271974    UP000085678    UP000261540    UP000076420    UP000242638    UP000245119    UP000030742    UP000087266    UP000261560    UP000265180    UP000019118    UP000018467    UP000235965    UP000261440    UP000265040    UP000001038    UP000265200    UP000028760    UP000007635    UP000261640    UP000193380    UP000257160    UP000265140    UP000265080    UP000245340    UP000192224    UP000008227    UP000002852    UP000261600    UP000261420    UP000000437    UP000261500    UP000265160    UP000221080    UP000265000    UP000011712    UP000002494    UP000002281    UP000261480    UP000286641    UP000233100    UP000005215    UP000248480    UP000233200    UP000264840    UP000007303    UP000248483    UP000245320    UP000261460    UP000028990   

PRIDE

H9JEJ6   

Pfam

PF10373   EST1_DNA_bind        + More
PF10374   EST1

Interpro

IPR018834   DNA/RNA-bd_Est1-type        + More
IPR011990   TPR-like_helical_dom_sf       
IPR019458   EST1       
IPR013026   TPR-contain_dom       
IPR019734   TPR_repeat       

SUPFAM

SSF48452   SSF48452       

Gene 3D

1.25.40.10    

ProteinModelPortal

A0A437BXN4   A0A2A4K7W5   A0A0N1ICP6   A0A194PW79   A0A2H1WPG9   A0A212F8R9   + More
H9JEJ6   A0A232F8A2   K7IQ52   A0A0B7B4L9   D6WCQ2   A0A433UCE7   A0A1B6L3W1   A0A1B6J201   A0A1S3I980   A0A1Y1K6F6   A0A3B3S138   A0A2C9LEP2   A0A3P9Q1U8   A0A2T7NMZ8   U4ULK1   A0A1S3R2Q9   A0A3B3CYI8   A0A3P9L225   N6TST5   A0A1S3R1A1   A0A1S3R1A6   A0A3B1JD08   A0A2J7RQ46   A0A3B4C1Y3   A0A3P9Q277   A0A3B4BZ41   A0A3P9L1W9   A0A3Q1HQJ6   A0A3P9L1U9   A0A3B1K2V4   A0A3B3B8G8   A0A3B3I6P3   A0A3P9JAA9   A0A3Q1J3P7   A0A3P9JAE8   A0A087YMU0   H2LSV7   A0A3P9JAB5   A0A3B3HWQ4   G3NA05   A0A3Q3N6P0   A0A060VTY3   A0A147ARF6   A0A3Q1CFL9   A0A3P8XYZ8   A0A3P8SFX7   A0A3P8ZUR7   A0A3Q3N6Q0   A0A2U3ZDB1   A0A1W4ZZU1   A0A287B230   M3ZY43   A0A1W5A8T1   A0A3Q3IJ12   A0A3B4V0G6   A0A1W5A856   A0A3Q1CFK3   Q1LVF3   A0A3P8Y1Y6   A0A146P779   A0A3P8SEK5   A0A3Q3IC17   A0A3Q3N6R4   A0A3B3TJ39   A0A3P9CDI2   A0A2D0R8E3   A0A1B6BZA1   A0A3Q2QJ15   K9IPW7   A0A2I2UYZ3   A0A0U1RRU7   F7B512   A0A3B3Y866   B3DI22   A0A3Q3IJ48   A0A3Q7PI65   A0A0R4IJJ6   A0A2K5UXC6   A0A3Q3IC24   I3N8D9   A0A2D0R8D7   A0A3P9CDZ9   A0A2Y9DE78   A0A2K6Q509   A0A3Q2UWX2   A0A287B3B8   H3CAU2   A0A2Y9PV00   A0A2U4CR72   A0A3B4FLK5   A0A3Q2WB98   A0A091D5K4   A0A1S3K3N0  

PDB

1YA0     E-value=3.10781e-38,     Score=393

KEGG

101742795    K14409 protein SMG7 | (RefSeq) uncharacterized LOC101742795

PATHWAY

03015    mRNA surveillance pathway - Bombyx mori (domestic silkworm)

GO

GO:0007004   GO:0070034   GO:0032210   GO:0005737   GO:0005697   GO:0042162   GO:0043009   GO:0005515   GO:0005524   GO:0006418   GO:0000166   GO:0004820   GO:0006426   GO:0003676   GO:0016876   GO:0043039  

Length:

188

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

9.51549000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.35039

outside

1  -  188

 

 

Pi

41.941155

Theta

139.440585

Tajima's D

-1.296696

CLR

216.003274

CSRT

0.0901954902254887

Interpretation

Uncertain