SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08659
Pre Gene Modal
BGIBMGA007943
Annotation
PREDICTED:_uncharacterized_protein_LOC101742795_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.821
 

Sequence

CDS
ATGAGAAGAAGTCCGGCGCTTGTTGCAGTGCGTGTGTGGGTGCAGTGGGCGGTGGGGCGGGGCGCGGGGCGGGGTGCGGGGTGGGGCGCGCGGGCGGCGCTGTGGCCGGCGCTCGCACACACGCTCAACGCGCTGCCGCAGCACGCACACCAGCACAGCGATGCGTATCTAAGGGTCCCCCTGCCGGAAGACGAAGAGCTGTACGGGTTCGTGCCGCTGGAGGGCGCCTTCGACAAGCTGCGGTTCAACAGCCACGCCTCCTGGGACACTTACGGCGGCCGCCTGCCCGACCTGCTCGGGGACGACGACATGCAGTCGCCGGCGGACGCGGCCGTCACGCTCAGCGGAGACTCCGAGCTGGAGCGGAAGATACGCGCCCACAGACTCATCGAGCTCGGGAAGAGACTGGCGGAGAAATGTCCGCAGCACTTCTCCTACACTGAAGAAGATGGTAAAGTAACTTTCACGGGGGCAAACGCGGGAGGGGAGCAGCTGTCCCGCGCCCTCGCCGAGCTGTCTCTGGTGCAAGGGGACGAGGTGCTGGGGGGCGAGGGGGGCGGGGGGGCCGACCCGCACGAGGACGACAGCGAGGACGAGCCCACCCCCCCGCCGCCGCCCGTCATCATCTCCGAGGCAGACTTCCGGGAGAAAGTTCGGGAGAAGCGCGTCGGCATCCTGAAGCCGCAGGGGTCGCTGGAGCGGGCCCGCGAGGAGCGCGCGCTGGCCTGCACCCAGGAGGACCAGCCTGAAATTGAGGTAGAAGAGAGCAAGAGCGAGGACCGGCGGGAGGGCCGCAAGCCGCGCGTCAACATCGCCATGGCGGCCATCATGCGGAAACAGGAGGAGACTAACAAACAGGTTAAGTTCGTGACGCCGCCGCCGACGCCAGATTCGACAGCAGACAGCACAGACTCCAAAGAACAGGACAAACCGAAAATAATACAACCGAAAGTTATGAAATCTCTCGCCAACCTCCCCATAGGCAGGAAAACGGGAGGAATCCTGTCACTCAAGGACAAGTCCGCCGGCTATCCTCACCTTGTTAATGTGGAACCGGAAATAGTCAAGAAACCCGAAAGCGACGAGAAGAAAGACGTGAAGTTCAGTCAAAATACCAACCAGAGCTCGCAGAACTACACCGCGCGACAGGAAACCCCCTCGTCGCCCAACTGGGGCGGAGCCGGGCAGCAGGGCTACGACGCGCCCCGGGCGGCCTTCCAAAAGAACTACGGCATACCAAAAACCGGCATCAGCTACAGCACCGGCCACCAAAGCAACCAGGGCATACGGCTGCCCGTCGTGAACCCCAGGGAGATCGACGTGACGACGGCCGCCATACAGAAGCAGAGCTCCCGGCAAGACCTCTTCCAAGACACGCACAAATTCGGGCACAACTACCAAGTGTCGGGCGATAAGAAGAACTTCCTGAACGACTTGCCGCCGCGCTTCGCGAACCAGTACCGGTACTGGCAGGCCGCTCAGGAAAATCAATTCAACGAAAACAAATTCAGGGATGACAACTTCACGCCCAGCAACGCAGCCCTACAGCCGTTCAATCAGCAGCGGAACAATTGGCTCCCGGAAAATTACCAGCAGGTCATGTCCGGGTGGAAGCCAGAGAACCAAACAGGTTACAACTCTACGTACTCGATGCAGCCAAACATGCAGGCGCATTACTATGCACCGGTCAACCCTAACATTCCGTCGTACACCAACATCCCAACCTACAACCAAATGCCCAACAACATGGGCCAACAAAAGCAAGAGAACATGATGAACCCAACGAGCTACCTGCAGTCAGCCATCGGCCAACCTCAGCTACAGACATTGCAGAATATAGTGACGTCACCGAACTTTAGCGCTCAGATCAATAACTTTGGAGCGTATGTGCCCAATCCGAGCTACGACTCGACCATGTACCCGCAGTTCACAAGCAAGCTGGGCTACCAGCCGCTTCACATGAAGATGATGGACAAGCAGCCCGGCTACCCAGGGAAGGAGTCTGCGGATATGGGACTTGGGTTCGGCCCCGGTGTCCCGGACATGTCGCAGAGGAACTTAAGCATGAACTACAAGGAACCTCTCGGCGTGATGGGACCGACGCAGAATGTTGAAAAGGTTAACGAGTCGATGGTCGGTGCTGCGTCAGGAAATACTTACTCGCTGTTCAGCGGGGCGCCGGACGCTCTCAGCTGGGGACAGAGTCGCCAGCCACAACAGTCACTATGGACGGGGCCCATCTCGTCACCGCTGGAGCGACTGCTCGAACAGCAGAAGCAGATGAAGCCACCGACGACTCAGTGA
Protein
MRRSPALVAVRVWVQWAVGRGAGRGAGWGARAALWPALAHTLNALPQHAHQHSDAYLRVPLPEDEELYGFVPLEGAFDKLRFNSHASWDTYGGRLPDLLGDDDMQSPADAAVTLSGDSELERKIRAHRLIELGKRLAEKCPQHFSYTEEDGKVTFTGANAGGEQLSRALAELSLVQGDEVLGGEGGGGADPHEDDSEDEPTPPPPPVIISEADFREKVREKRVGILKPQGSLERAREERALACTQEDQPEIEVEESKSEDRREGRKPRVNIAMAAIMRKQEETNKQVKFVTPPPTPDSTADSTDSKEQDKPKIIQPKVMKSLANLPIGRKTGGILSLKDKSAGYPHLVNVEPEIVKKPESDEKKDVKFSQNTNQSSQNYTARQETPSSPNWGGAGQQGYDAPRAAFQKNYGIPKTGISYSTGHQSNQGIRLPVVNPREIDVTTAAIQKQSSRQDLFQDTHKFGHNYQVSGDKKNFLNDLPPRFANQYRYWQAAQENQFNENKFRDDNFTPSNAALQPFNQQRNNWLPENYQQVMSGWKPENQTGYNSTYSMQPNMQAHYYAPVNPNIPSYTNIPTYNQMPNNMGQQKQENMMNPTSYLQSAIGQPQLQTLQNIVTSPNFSAQINNFGAYVPNPSYDSTMYPQFTSKLGYQPLHMKMMDKQPGYPGKESADMGLGFGPGVPDMSQRNLSMNYKEPLGVMGPTQNVEKVNESMVGAASGNTYSLFSGAPDALSWGQSRQPQQSLWTGPISSPLERLLEQQKQMKPPTTQ

Summary

Pfam
PF10373   EST1_DNA_bind        + More
PF10374   EST1
Interpro
IPR011990   TPR-like_helical_dom_sf        + More
IPR019458   EST1       
IPR018834   DNA/RNA-bd_Est1-type       
SUPFAM
SSF48452   SSF48452       
Gene 3D

Ontologies

Topology

Length:
767
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0806799999999999
Exp number, first 60 AAs:
0.08045
Total prob of N-in:
0.00397
outside
1  -  767
 
 

Population Genetic Test Statistics

Pi
47.767586
Theta
144.118095
Tajima's D
-1.029724
CLR
2371.205623
CSRT
0.134943252837358
Interpretation
Uncertain
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