SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08656
Pre Gene Modal
BGIBMGA007944
Annotation
PREDICTED:_iron-sulfur_protein_NUBPL_[Amyelois_transitella]
Location in the cell
Mitochondrial   Reliability : 2.454
 

Sequence

CDS
ATGACCCTACAGCGTAGGTTTCTCCGCTTCTCTAGTAGTTATGTGTTCAGTACCAGGATGAACACGATAGCACCATGCCTTCAAACAGTAAGATTTAACCACAGTAAAAGTGACATTATGGATCATAGAGCCAAAGTTATGAGCAAAGGGTTACCAGAGAAAAAGCCCCTACCTGGTGTAAAGAGTATCATACTTGTAGCTTCAGGGAAAGGAGGTGTTGGAAAAACTACCACAGCTGTAAACCTAGCATGTGCTATGAAAGTAATAGAACCGGACAAGGAAATAGGGCTCCTAGATGCTGATGTGTTTGGTCCTTCAGTACCATTGATGATGAATATCAGTGGAGAACCAATGCTTAATGACGATCATCTCATTGAACCTTTACTTAATTATGGTGTTAAATGTATGTCAATGGGTCTATTAGTGTCTGGCGAGAATGCTGTAGTGTGGCGCGGCTTAATGGTGATGCAAGCACTGGAACGTCTGACGCGACACGTGGCGTGGGGTCCACTTGACTGTCTCGTTGTAGATACGCCGCCTGGTACAGGCGATACACATTTATCACTTGCGCAAAACTTGCCTTTAGATGGAGCAATAGTAGTAACAACACCCCAATCAGCCGCATTGCAAGTAACTAAAAGAGGCATAAATATGTTCGAGAAATTAAAGGTTCCTATTATAGATATGGGTCTTGAGATTATTGAAAGTTTTGAAGTAGATCAAAATATGTCAGATTGTATAAACAGCGGGAAGCCAGCGATTTACGCCCTCCCAGACAGCATACACGCAGAGAAATACAGACACCTTGCTAATAAAGTTTTTAAATATATAGATGATAAGGAAAACCACAGAGCAAAAGCCAAAGAACAATGA
Protein
MTLQRRFLRFSSSYVFSTRMNTIAPCLQTVRFNHSKSDIMDHRAKVMSKGLPEKKPLPGVKSIILVASGKGGVGKTTTAVNLACAMKVIEPDKEIGLLDADVFGPSVPLMMNISGEPMLNDDHLIEPLLNYGVKCMSMGLLVSGENAVVWRGLMVMQALERLTRHVAWGPLDCLVVDTPPGTGDTHLSLAQNLPLDGAIVVTTPQSAALQVTKRGINMFEKLKVPIIDMGLEIIESFEVDQNMSDCINSGKPAIYALPDSIHAEKYRHLANKVFKYIDDKENHRAKAKEQ

Summary

EMBL
BABH01003231    ODYU01001486    SOQ37748.1    NWSH01000087    PCG79756.1    RSAL01000001    + More
RVE55202.1    GAIX01009069    JAA83491.1    KQ459596    KPI95387.1    AGBW02009681    OWR50137.1    KQ414654    KOC65923.1    KQ435989    KOX67683.1    KZ288445    PBC25634.1    KQ761783    OAD57028.1    GECZ01007758    JAS62011.1    NEVH01001348    PNF42954.1    GEBQ01029119    JAT10858.1    BT127901    AEE62863.1    KQ971317    EEZ98808.2    PNF42955.1    KQ979568    KYN21005.1    KQ434831    KZC07839.1    KK108395    QOIP01000006    EZA46718.1    RLU21159.1    KQ982335    KYQ57661.1    GL441764    EFN64324.1    GL888341    EGI62465.1    KQ981864    KYN34139.1    KQ976580    KYM79958.1    ADTU01014962    PBC25633.1    GL448535    EFN84391.1    KQ977721    KYN00368.1    KB632379    ERL94117.1    GEBQ01027603    JAT12374.1    KK852703    KDR18089.1    GFXV01000840    MBW12645.1    PYGN01001182    PSN36836.1    ACPB03007038    APGK01040365    KB740979    ENN76395.1    GECU01027490    JAS80216.1    DS235138    EEB12444.1    GACK01007052    JAA57982.1    GDKW01003146    JAI53449.1    CVRI01000020    CRK90798.1    GEBQ01014305    JAT25672.1    LNIX01000003    OXA58788.1    ENN76396.1    GL832971    EGD75270.1    GAKP01005492    JAC53460.1    JRES01000940    KNC26988.1    GAKP01005491    JAC53461.1    GADI01007217    JAA66591.1    GBHO01013991    GBHO01013990    GBRD01006039    GDHC01010206    JAG29613.1    JAG29614.1    JAG59782.1    JAQ08423.1    GEFM01002488    JAP73308.1    GECU01003653    JAT04054.1    ABLF02029830    AK342039    BAH72226.1    AXCN02000732    GDHF01027786    JAI24528.1    GAMC01011514    JAB95041.1    UFQS01003316    UFQT01003316    SSX15485.1    SSX34851.1    NNAY01000571    OXU27620.1    CH963852    EDW75658.1    UFQT01003132    SSX34619.1    JH431671    GECL01000783    JAP05341.1    GCES01008091    JAR78232.1    GEDV01003468    JAP85089.1    CM000158    EDW89877.1    KB203470    ESO84565.1    AHAT01003856    KRJ98765.1    GCES01044605    JAR41718.1    AYCK01021768    AYCK01021769    KK854205    PTY13057.1    CR760654    CAJ81382.1    CH477986    EAT34599.1    CH954179    EDV54340.1    AAQR03086288    AAQR03086289    AAQR03086290    AAQR03086291    AAQR03086292    AAQR03086293    AAQR03086294    AAQR03086295    AAQR03086296    AAQR03086297   
Pfam
PF10609   ParA        + More
PF02195   ParBc
Interpro
IPR033756   YlxH/NBP35        + More
IPR027417   P-loop_NTPase       
IPR019591   Mrp/NBP35_ATP-bd       
IPR000808   Mrp_CS       
IPR003115   ParB/Sulfiredoxin_dom       
IPR036086   ParB/Sulfiredoxin_sf       
SUPFAM
SSF52540   SSF52540        + More
SSF110849   SSF110849       
PDB
2PH1     E-value=1.73213e-23,     Score=269

Ontologies

Topology

Length:
290
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0812299999999999
Exp number, first 60 AAs:
0.01074
Total prob of N-in:
0.03931
outside
1  -  290
 
 

Population Genetic Test Statistics

Pi
162.51009
Theta
14.095161
Tajima's D
0.558869
CLR
1.309975
CSRT
0.543422828858557
Interpretation
Uncertain
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