Gene

KWMTBOMO08655  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007639

Annotation

surfeit_4-like_protein_[Bombyx_mori]

Location

Bomo_Chr15(+):1660013-1674846      View in EpiBrowser

Full name

Surfeit locus protein 4 homolog      

Location in the cell

PlasmaMembrane   Reliability : 4.869

CDS

ATGCAAATTCCTAATGAATACGTATCAACCGCTGAAGACGTAGCCGATCAGGTAATACGAAAAGGCAAAAATGTCTTACCCACTGTGGCGCGACTGTGCCTTATATCCACATTCCTGGAGGACGGTCTCCGCATGTGGTTCCAGTGGTCAGAGCAGAGAGACTACATGGACATGTCCTGGGGCTGCGGCAAATTCCTCGCCACAATGTTTGTGATAGTAAATTTATTTGGTCAATTAGGAGGATGTGTTATGGTGCTAGGAAGGCTCAAAGTGGATATCGCTTGCGGCGTGCTGTTCTTCATAGTTGTATTACAGACATTCGCGTACAGTATACTATGGGACGTACAGTTCCTTCTCCGCAATTTGGCATTGATCGGAGCGCTACTGCTGGTGTTGGCGGAGGCCCGAGCTGAAGGGCGCAGTCTGTTCGCGGGCGTGCCGTCGCTCGGAGAGAACAAACCGAAGACGTACTTGCAACTCGCCGGTCGCATCCTGCTGGCCTTCATGTTCATCACGCTCTTAAGATTTGAAATCTCATTCCTGCAGATCATACAAGATCTTCTCGGGAGCATCTTGATGATATTGGTGACGGTGGGCTACCGGACGAAGCTGTCTGCTCTGATGCTTGTCCTCGTACTGACAGTTCTCAATCTGTACCATAACGCGTGGTGGGCGGTGCCATCCTACAAACCGCTCAGAGACTTCCTCAAATATGACTTCTTCCAGACATTGTCAGTGATAGGAGGCCTGCTTATGATAGTCTACCTCGGGCCGGGCGGCGTCAGTATGGACGAACACAAGAAGAAATGGTAG

Protein

MQIPNEYVSTAEDVADQVIRKGKNVLPTVARLCLISTFLEDGLRMWFQWSEQRDYMDMSWGCGKFLATMFVIVNLFGQLGGCVMVLGRLKVDIACGVLFFIVVLQTFAYSILWDVQFLLRNLALIGALLLVLAEARAEGRSLFAGVPSLGENKPKTYLQLAGRILLAFMFITLLRFEISFLQIIQDLLGSILMILVTVGYRTKLSALMLVLVLTVLNLYHNAWWAVPSYKPLRDFLKYDFFQTLSVIGGLLMIVYLGPGGVSMDEHKKKW

Similarity

Belongs to the SURF4 family.

Keywords

Complete proteome   Endoplasmic reticulum   Membrane   Reference proteome   Transmembrane   Transmembrane helix  

Feature

chain  Surfeit locus protein 4 homolog

Uniprot

Q2F649   A0A2A4K693   I4DRS6   I4DNE8   A0A2H1VA88   S4PDK9   + More
A0A3S2P258   A0A212F8T7   D6WCQ4   A0A0A1XL38   A0A1Q3FXU7   A0A023EN48   A0A336MY93   A0A1L8DUP8   A0A1I8MQ98   A0A1A9X5H5   D3TS89   Q1HQL8   A0A0T6AWN2   A0A1A9XKD4   A0A1B0AUG5   A0A034WFV0   W8B3H3   T1DD67   A0A0K8UBN0   A0A1L8EHM4   A0A0L0C1H4   A0A2M4A8Y7   A0A2M4BWR3   W5JDR5   A0A182FJS4   A0A2D1QUE4   A0A1I8NPS1   A0A182IYT8   A0A182W632   A0A2M3ZGN3   Q7Q2G0   A0A182M8N0   U5EZA2   A0A182RVW0   A0A182Q3U0   A0A067RI42   B4HDX3   B3P0V3   A0A158NG83   B4GNU6   Q29BE7   B3MSU6   A0A3B0JF30   A0A1W4VT23   O18405   V5I9F1   E2BXP4   E9IMP1   A0A1Y1KS00   A0A0M4ES33   B4NAT5   A0A1W4XNE6   A0A2J7RM50   B4M600   A0A1J1HW79   A0A0P4VLM8   R4G428   B4JU47   A0A069DRY9   A0A182GTN0   B4PS45   B4KAQ6   A0A2R7WHL2   E2AA20   A0A0V0G393   A0A224XQ97   A0A161MNS8   N6TF48   A0A1L8EAA3   A0A151J5E9   A0A1B6FRS9   A0A1B6IEB8   A0A0K8V2I6   A0A195B7Y0   F4WND0   A0A151XAK0   A0A1L8EAD9   A0A226EM46   A0A1L8EAN9   A0A1I8NPQ9   A0A3L8DLF3   A0A2A3EFH7   V9IMF1   A0A0M8ZN57   A0A088AW94   A0A1D2NME1   A0A0A9ZFJ1   E0VHK9   R4WJL3   T1DPY7   A0A1B6BWM4   B4QYI9   A0A232ER57   A0A0L7R559  

Pubmed

22651552    26354079    23622113    22118469    18362917    19820115    + More
25830018    24945155    26483478    25315136    20353571    17204158    17510324    25348373    24495485    24330624    26108605    20920257    23761445    12364791    14747013    17210077    24845553    17994087    21347285    15632085    23185243    18057021    8816471    10731132    12537572    12537569    20798317    21282665    28004739    27129103    26334808    17550304    23537049    21719571    30249741    27289101    25401762    20566863    23691247    28648823   

EMBL

DQ311223    ABD36168.1    NWSH01000087    PCG79757.1    AK405252    BAM20616.1    + More
AK402873    KQ459596    BAM19438.1    KPI95386.1    ODYU01001486    SOQ37749.1    GAIX01003636    JAA88924.1    RSAL01000001    RVE55203.1    AGBW02009681    OWR50138.1    KQ971317    EEZ97799.1    GBXI01002692    JAD11600.1    GFDL01002655    JAV32390.1    JXUM01006226    JXUM01006227    JXUM01006228    JXUM01006229    GAPW01003293    KQ560211    JAC10305.1    KXJ83821.1    UFQT01000258    UFQT01003114    SSX22499.1    SSX34601.1    GFDF01003931    JAV10153.1    CCAG010009218    EZ424291    ADD20567.1    DQ440426    CH477512    ABF18459.1    EAT39756.1    LJIG01022630    KRT79546.1    JXJN01003625    JXJN01003626    GAKP01006309    JAC52643.1    GAMC01010885    JAB95670.1    GALA01001532    JAA93320.1    GDHF01028255    JAI24059.1    GFDG01000567    JAV18232.1    JRES01001003    KNC26208.1    GGFK01003881    MBW37202.1    GGFJ01008332    MBW57473.1    ADMH02001456    ETN62512.1    KY285040    ATP16143.1    GGFM01006955    MBW27706.1    AAAB01008975    EAA13494.4    AXCM01005472    GANO01001159    JAB58712.1    AXCN02002515    KK852460    KDR23526.1    CH480815    EDW42065.1    CH954181    EDV49001.1    ADTU01015042    CH479186    EDW38829.1    CM000070    EAL27051.1    EIM52356.1    CH902623    EDV30336.1    KPU72803.1    OUUW01000005    SPP80735.1    Y14823    AE014297    AY118406    GALX01003045    JAB65421.1    GL451283    EFN79536.1    GL764255    EFZ18079.1    GEZM01079235    JAV62475.1    CP012526    ALC47485.1    CH964232    EDW80899.1    NEVH01002577    PNF41908.1    CH940652    EDW59076.1    KRF78663.1    CVRI01000021    CRK91612.1    GDKW01001264    JAI55331.1    GAHY01001151    JAA76359.1    CH916374    EDV91017.1    GBGD01002502    JAC86387.1    JXUM01087506    KQ563637    KXJ73571.1    CM000160    EDW97465.1    CH933806    EDW16793.1    KK854832    PTY19096.1    GL438001    EFN69719.1    GECL01003545    JAP02579.1    GFTR01004418    JAW12008.1    GEMB01003519    JAR99698.1    APGK01040365    KB740979    KB632379    ENN76393.1    ERL94118.1    GFDG01003099    JAV15700.1    KQ980017    KYN18232.1    GECZ01016854    JAS52915.1    GECU01022464    JAS85242.1    GDHF01019544    JAI32770.1    KQ976574    KYM80350.1    GL888236    EGI64300.1    KQ982339    KYQ57387.1    GFDG01003101    JAV15698.1    LNIX01000003    OXA58763.1    GFDG01003100    JAV15699.1    QOIP01000006    RLU21264.1    KZ288256    PBC30543.1    JR053724    AEY62002.1    KQ436003    KOX67635.1    LJIJ01000005    ODN06440.1    GBHO01027914    GBHO01000843    GBHO01000842    GBHO01000840    JAG15690.1    JAG42761.1    JAG42762.1    JAG42764.1    DS235171    EEB12895.1    AK417750    BAN20965.1    GAMD01001545    JAB00046.1    GEDC01031606    JAS05692.1    CM000364    EDX12834.1    NNAY01002670    OXU20812.1    KQ414654    KOC65959.1   

Proteomes

UP000218220    UP000053268    UP000283053    UP000007151    UP000007266    UP000069940    + More
UP000249989    UP000095301    UP000091820    UP000092444    UP000008820    UP000092443    UP000092460    UP000037069    UP000000673    UP000069272    UP000095300    UP000075880    UP000075920    UP000007062    UP000075883    UP000075900    UP000075886    UP000027135    UP000001292    UP000008711    UP000005205    UP000008744    UP000001819    UP000007801    UP000268350    UP000192221    UP000000803    UP000008237    UP000092553    UP000007798    UP000192223    UP000235965    UP000008792    UP000183832    UP000001070    UP000002282    UP000009192    UP000000311    UP000019118    UP000030742    UP000078492    UP000078540    UP000007755    UP000075809    UP000198287    UP000279307    UP000242457    UP000053105    UP000005203    UP000094527    UP000009046    UP000000304    UP000215335    UP000053825   

PRIDE

Q2F649    O18405   

Pfam

PF02077   SURF4        + More
PF01753   zf-MYND

Interpro

IPR002995   Surf4        + More
IPR002893   Znf_MYND       
IPR011990   TPR-like_helical_dom_sf       

Gene 3D

1.25.40.10    

ProteinModelPortal

Q2F649   A0A2A4K693   I4DRS6   I4DNE8   A0A2H1VA88   S4PDK9   + More
A0A3S2P258   A0A212F8T7   D6WCQ4   A0A0A1XL38   A0A1Q3FXU7   A0A023EN48   A0A336MY93   A0A1L8DUP8   A0A1I8MQ98   A0A1A9X5H5   D3TS89   Q1HQL8   A0A0T6AWN2   A0A1A9XKD4   A0A1B0AUG5   A0A034WFV0   W8B3H3   T1DD67   A0A0K8UBN0   A0A1L8EHM4   A0A0L0C1H4   A0A2M4A8Y7   A0A2M4BWR3   W5JDR5   A0A182FJS4   A0A2D1QUE4   A0A1I8NPS1   A0A182IYT8   A0A182W632   A0A2M3ZGN3   Q7Q2G0   A0A182M8N0   U5EZA2   A0A182RVW0   A0A182Q3U0   A0A067RI42   B4HDX3   B3P0V3   A0A158NG83   B4GNU6   Q29BE7   B3MSU6   A0A3B0JF30   A0A1W4VT23   O18405   V5I9F1   E2BXP4   E9IMP1   A0A1Y1KS00   A0A0M4ES33   B4NAT5   A0A1W4XNE6   A0A2J7RM50   B4M600   A0A1J1HW79   A0A0P4VLM8   R4G428   B4JU47   A0A069DRY9   A0A182GTN0   B4PS45   B4KAQ6   A0A2R7WHL2   E2AA20   A0A0V0G393   A0A224XQ97   A0A161MNS8   N6TF48   A0A1L8EAA3   A0A151J5E9   A0A1B6FRS9   A0A1B6IEB8   A0A0K8V2I6   A0A195B7Y0   F4WND0   A0A151XAK0   A0A1L8EAD9   A0A226EM46   A0A1L8EAN9   A0A1I8NPQ9   A0A3L8DLF3   A0A2A3EFH7   V9IMF1   A0A0M8ZN57   A0A088AW94   A0A1D2NME1   A0A0A9ZFJ1   E0VHK9   R4WJL3   T1DPY7   A0A1B6BWM4   B4QYI9   A0A232ER57   A0A0L7R559  

KEGG

692846    K20369 ER-derived vesicles protein | (RefSeq) surfeit 4-like protein

GO

GO:0016021   GO:0045169   GO:0005789   GO:0012505   GO:0005524   GO:0006418   GO:0000166   GO:0004820   GO:0005737   GO:0006426   GO:0003676   GO:0016876   GO:0043039  

Subcellular location

Endoplasmic reticulum membrane  

Length:

270

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

128.44026

Exp number, first 60 AAs:

1.21275

Total prob of N-in:

0.18928

outside

1  -  64

TMhelix

65  -  87

inside

88  -  93

TMhelix

94  -  113

outside

114  -  177

TMhelix

178  -  200

inside

201  -  206

TMhelix

207  -  226

outside

227  -  240

TMhelix

241  -  263

inside

264  -  270

 

 

Pi

27.59722

Theta

205.570704

Tajima's D

1.016896

CLR

0.07247

CSRT

0.664716764161792

Interpretation

Uncertain