SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08654
Annotation
hypothetical_protein_KGM_17710_[Danaus_plexippus]
Full name
Ubiquitin-like protein 5      
Location in the cell
Cytoplasmic   Reliability : 2.032 Nuclear   Reliability : 1.491
 

Sequence

CDS
ATGCTTGAAGTAACATGCAATGATCGACTCGGTAAGAAGGTTCGAGTTAAATGCAACCCTGACGATACCGTGGGTGATTTAAAGAAGTTAATAGCCGCACAAACTGGCACTAGATACGACAAAATAGTACTCAAGAAATGGTACACAGTATTCAAGGATCATATTAAACTTGCAGACTATGAAATCCACGATGGGATGAATTTGGAGCTGTACTATCAATAA
Protein
MLEVTCNDRLGKKVRVKCNPDDTVGDLKKLIAAQTGTRYDKIVLKKWYTVFKDHIKLADYEIHDGMNLELYYQ

Summary

Keywords
Complete proteome   Cytoplasm   Reference proteome   Ubl conjugation pathway  
Feature
chain  Ubiquitin-like protein 5
EMBL
RSAL01000001    RVE55204.1    NWSH01000087    PCG79721.1    ODYU01001486    SOQ37750.1    + More
AGBW02009681    OWR50139.1    KQ459596    KPI95385.1    GAIX01009090    JAA83470.1    QCYY01000997    ROT81264.1    DS235154    EEB12652.1    GFDL01009505    JAV25540.1    DS232154    EDS36237.1    CH477512    EAT39757.1    JXUM01006226    GAPW01006829    GAPW01006828    GAPW01006827    GAPW01006826    GAPW01006825    KQ560211    JAC06769.1    KXJ83820.1    GANO01001099    JAB58772.1    GDKW01000875    JAI55720.1    GECL01001684    JAP04440.1    GBGD01003682    JAC85207.1    ACPB03000062    GAHY01000983    JAA76527.1    APCN01005462    AXCM01006844    AAAB01008816    EAA05206.2    UFQS01003114    UFQT01003114    SSX15227.1    SSX34602.1    GGFM01007662    MBW28413.1    GGFK01010949    MBW44270.1    ADMH02001538    ETN62136.1    AMQM01003889    KB096365    ESO05177.1    GFDF01004374    JAV09710.1    AJVK01025545    AJWK01016892    MNPL01027404    OQR67777.1    ATLV01012339    KE524783    KFB36504.1    AXCP01002356    JO843358    AEO34975.1    GFAA01000537    JAU02898.1    GBBK01004492    JAC19990.1    GBBL01002428    JAC24892.1    GFAC01006084    JAT93104.1    CVRI01000028    CRK92457.1    CCAG010023676    CCAG010023677    JXJN01003629    KQ977199    KYN04996.1    GL887707    EGI70204.1    KQ435712    KOX79372.1    ADTU01006918    GL443762    EFN61610.1    KK107293    QOIP01000005    EZA53145.1    RLU22717.1    GL447151    EFN86834.1    KQ971317    EEZ99431.1    JRES01001003    KNC26206.1    GL732525    EFX88865.1    GDIP01118014    GDIQ01072578    JAL85700.1    JAN22159.1    GFDG01000815    JAV17984.1    LJIJ01000125    ODN02091.1    KZ288256    PBC30617.1    GBBM01003230    JAC32188.1    KQ414654    KOC66035.1    GDAI01001345    JAI16258.1    NNAY01000723    OXU26786.1    GGLE01003686    MBY07812.1    KK117413    KFM70406.1    GG666482    EEN65314.1    HACG01010380    CEK57245.1    CH480816    EDW46665.1    CM000362    CM002911    EDX05922.1    KMY91818.1    AE013599    BT023690   
Pfam
PF00240   ubiquitin        + More
PF14560   Ubiquitin_2
Interpro
IPR039732   Hub1/Ubl5        + More
IPR000626   Ubiquitin_dom       
IPR029071   Ubiquitin-like_domsf       
SUPFAM
SSF54236   SSF54236       
PDB
1UH6     E-value=3.32019e-32,     Score=339

Ontologies

Topology

Subcellular location
Cytoplasm  
Length:
73
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.36893
outside
1  -  73
 
 

Population Genetic Test Statistics

Pi
145.123583
Theta
142.007774
Tajima's D
0.068953
CLR
139.13093
CSRT
0.383930803459827
Interpretation
Uncertain
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