SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08647
Pre Gene Modal
BGIBMGA007634
Annotation
PREDICTED:_dual_specificity_protein_kinase_TTK_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.038
 

Sequence

CDS
ATGAGTGGAAACACGGAATCTACTTCTAACAGCATCAAATTTGCTCCGATGCCAATGTCAGCTTTATTAGCTAATTTGATGCCTCTTCAAAAAGAGTCAGATACCCCTGATTCAAGTTTTTTGTCTGCTGACGAGAGCGATGATGATTCGATAGGCGAAACGGTCTCCAAGAAGCCTTCAACAAATAATAAAATAAATAGGGACTTCTACACACCTGTAATAAAACCCAAATCGAAAGAAGTTAAAGCGGTCGTTTTGGAGAAAAAAGCCTGTCCCACCTCTGAAGTGAAGAAACGTAATGTATTACTGCCATTTAATAACAGTACTGTTAAAAGTACTAATTCAGATATTAAACAAACACCTGAAATGATTAAAGTTCAAAATAGTGCACAGAAAAATAAATCTTCAACACCAGGGATTAAATCAGGTATACGTAAGTTTACACCAAACTCAGCTAAAAAGAGTCATAAGAAAACTCCACAGAACAGCATGATCCCGAGCAGAGATAGGGTGAGGTGTGAATTGTTTACGCAAAACAAAAAGGATGAGAAGAGCAATCAAATAGCACAGCCACAGCCAATAATACCTGAGCCGGAGACCCCCTTAAACAAAAAACTGATACCTGCATCATATGCAGCTACACCTTCATACCCTCAAGGCGCTGTAGGCAATAATTCCAAAATTTTATTTAAAACAACAAACATTAAGGATAAAAAGTACATGTTCATAAAGAAATTGGGCATAGGAGGTTCTAGTGAGGTTTACAAGGTCCTAGAAGTGGGAACATCTTGTGAGTATGCAGTAAAGTGTGTTTACTTAGCGACAGATCATGAACTGGCCCAAGGATATATCAATGAGGTTCGACTGCTCAGGGAATTGCAGAACTCAGACAGGGTTGTAAAGCTATATGACTATGAGTATGACAAATCACAACAGATGTTACGCATGGTTTTGGAAGTTGGTGAGACGGATTTATCAACATTCTTAAAAGGATGCAATTCGGGAGTACCTCCTGCTCTTGTGCTTCATTACTGGGAGGAAATGCTCCATGCTGTTAATTACATACATGAAAACGGTGTGATTCACGCAGACCTGAAGCCCGCAAACTTCTTGTTGGTGAGTGGACGTCTGAAGCTGATCGACTTCGGTATCGCGTCGTCGGTGAGCGGCGACGCGACGAGCGTGGTGCGGGCGCAAGCGGCCGGCACGTACTCCTACATCAGCCCCGAGGCGCTGCTCGGCGGCGCCGGACAACACGCGCACTCGCCGCCGGACGGCTCCGCGCCCATCAAGATCTCATTCCGTTCAGACGTGTGGTCTTTGGGCTGTATTCTGTACAGTATGGTTTATGGCCACACACCTTTTGCGCACATACGTAGTCTCGCTAAACTGGCTGCCATTCTCGACCCCAACCATCGGATAGAGTATCCGCCTGCTCCACATCTGCCTCCGTCGTTGCTGTCGACCCTGAAGTGGTGCCTGACGTACAACGCGCGAGGGCGGCCCTACGTGCGCGAGCTGCTGGCCGTGCAGCACCTGCAGCCGCCCAGCTCGCCGCTGCCGCAGCCGCTGCTCGACAAGCTGCAGAAGCTCGTCACGCCCCAGGAGTACAGCTTGCTGCAGAGAGCACAGATATGA
Protein
MSGNTESTSNSIKFAPMPMSALLANLMPLQKESDTPDSSFLSADESDDDSIGETVSKKPSTNNKINRDFYTPVIKPKSKEVKAVVLEKKACPTSEVKKRNVLLPFNNSTVKSTNSDIKQTPEMIKVQNSAQKNKSSTPGIKSGIRKFTPNSAKKSHKKTPQNSMIPSRDRVRCELFTQNKKDEKSNQIAQPQPIIPEPETPLNKKLIPASYAATPSYPQGAVGNNSKILFKTTNIKDKKYMFIKKLGIGGSSEVYKVLEVGTSCEYAVKCVYLATDHELAQGYINEVRLLRELQNSDRVVKLYDYEYDKSQQMLRMVLEVGETDLSTFLKGCNSGVPPALVLHYWEEMLHAVNYIHENGVIHADLKPANFLLVSGRLKLIDFGIASSVSGDATSVVRAQAAGTYSYISPEALLGGAGQHAHSPPDGSAPIKISFRSDVWSLGCILYSMVYGHTPFAHIRSLAKLAAILDPNHRIEYPPAPHLPPSLLSTLKWCLTYNARGRPYVRELLAVQHLQPPSSPLPQPLLDKLQKLVTPQEYSLLQRAQI

Summary

Similarity
Belongs to the protein kinase superfamily.
Pfam
PF00069   Pkinase
Interpro
IPR017441   Protein_kinase_ATP_BS        + More
IPR011009   Kinase-like_dom_sf       
IPR008271   Ser/Thr_kinase_AS       
IPR000719   Prot_kinase_dom       
IPR027084   Prot_kin_Mps1_fam       
SUPFAM
SSF56112   SSF56112       
PDB
5NAD     E-value=2.11462e-50,     Score=504

Ontologies

Topology

Length:
545
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.15863
Exp number, first 60 AAs:
0.03072
Total prob of N-in:
0.00509
outside
1  -  545
 
 

Population Genetic Test Statistics

Pi
314.617632
Theta
224.164594
Tajima's D
1.30342
CLR
0
CSRT
0.740412979351032
Interpretation
Uncertain
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