Pre Gene Modal
BGIBMGA007632
Annotation
PREDICTED:_putative_RNA_polymerase_II_subunit_B1_CTD_phosphatase_RPAP2_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 3.837
Sequence
CDS
ATGAATTCGGCAGATGGTTGCATGGGACAGGAGATTGATGTGTCAATAATTGACAGAGTGAAAGTAGAACTTGAAAACAAGCCTTTCGTAGTTACCAATGGTTTTGTAAAAGCTACTCTTAGAGATATGGCATCAAATAATGGTAAAGATGATGTATATAATAAAGCTACTGAGGAGCAAAATGAACAAAACTTTAAATTAAGTACAGAAAGTACTGAACTGGATGAAAAAGAAATGAAGCATAAAGACAGCGTAAATAAAGCATCAGAAGGGAAATCCTATATCTTAAATTCAGAATCAAATTCTGTTCAAACACAAAAGTATCTACAGGAAAAATCTTGTCCTGTATCAGTGAAGTCTGAAAATACTGATAAAATGAAAAAAGCAGTATACAATCCAATGAACATTGTCGGAGATATCATAGAAAAACCTGAGAAGAAAATTGATTTGACTTTACTAAGTGCAAAGGATGAACAAAATAACGCAAGCTCATCTCTATCTCAAGAAAAAAAGAAAGAGAAAAAGCCATTAGTGACTGTATTAATTGTAGAAGTGGAAAAATGTCTAGCAGAATGGTTTACTTTAGACACATTAATTTTTCTCTATGGCGAAGAGAAAGTGAGAGAAATGGTATCAGATAAAGAAGACAGTGTGAAAGAATATCTGAAAAATTTTACAAAAGGTACATTCTACAATTCCACAGCCTATGATCAATACCAAGCTTTATGCAGAAAACTTAATATGCTCGAATTAGAAGACAAACGTTATGATGCCAAAACAATGCAAAGGGAAATGAAACCGCTGCCAGATTACACTATACTACAGGAAGAAAGCAAGAAAATACAATTGAAAGTAAAGGCGTTTTTTGCTGGTCAAACTGAAATACCTGAACCAGAGCCTGAAGAAAAGAACACACAATCAGATGAGAACTTCACAGCTTTGCCATTAGTAGACAAGAATTCTCAAAATGCATTACGTAGACGAATAGTCTGTCAACATTTAAATAAGACCCTACCGGACATCTTGAGGTGCCTAGGTTTATTAAGTTTGGCCATAAGCACAGAGGTGCGTCTTTTGGTAAACACATTCAAATTGAAAGCAAATAATATAATGTTTAAGCCGATTCAGTGGACTATGATTACCATAATATTTATAAAACTTCTATCATTAAGAGATGTACACTTGGCACACTTATTGGAGCAACCAATGGCATACCAACATATTCAGTTGTTACTCTTGAGTTACAAACAAGATAATGGCTATTTAGATAGACTAATATTTTGGCTGACCGATGTTGATAGATTATTGAATACAAACAGTCACTGTGCTATAGAATGA
Protein
MNSADGCMGQEIDVSIIDRVKVELENKPFVVTNGFVKATLRDMASNNGKDDVYNKATEEQNEQNFKLSTESTELDEKEMKHKDSVNKASEGKSYILNSESNSVQTQKYLQEKSCPVSVKSENTDKMKKAVYNPMNIVGDIIEKPEKKIDLTLLSAKDEQNNASSSLSQEKKKEKKPLVTVLIVEVEKCLAEWFTLDTLIFLYGEEKVREMVSDKEDSVKEYLKNFTKGTFYNSTAYDQYQALCRKLNMLELEDKRYDAKTMQREMKPLPDYTILQEESKKIQLKVKAFFAGQTEIPEPEPEEKNTQSDENFTALPLVDKNSQNALRRRIVCQHLNKTLPDILRCLGLLSLAISTEVRLLVNTFKLKANNIMFKPIQWTMITIIFIKLLSLRDVHLAHLLEQPMAYQHIQLLLLSYKQDNGYLDRLIFWLTDVDRLLNTNSHCAIE
Summary
Uniprot
EMBL
Proteomes
PRIDE
Pfam
PF04181 RPAP2_Rtr1
Gene 3D
ProteinModelPortal
Ontologies
PANTHER
Topology
Length:
445
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.5821
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00823
outside
1 - 445
Population Genetic Test Statistics
Pi
215.725705
Theta
205.548758
Tajima's D
0.274237
CLR
0
CSRT
0.449427528623569
Interpretation
Uncertain
