Silkworm Genome Informatics Database

Gene

KWMTBOMO08638

Pre Gene Modal

BGIBMGA007952

Annotation

PREDICTED:_uncharacterized_protein_LOC106117228_isoform_X2_[Papilio_xuthus]

Location

Bomo_Chr15(-):1484334-1497932 View in EpiBrowser

Location in the cell

Extracellular Reliability : 2.323 PlasmaMembrane Reliability : 2.048

CDS

ATGTGGATGTGGTTCGGTTACGACCTCGGAGACTTCCTGTTCTCCGGCCTAATCATCAGCACGCGGTGGGCGTTCGCCCTAACCTGGATCGCGCTGTTCTTTGTGGCACTCCTGTTCGAAGGTTCCAAGGTTTACCTAGCCAAAGTGCAGCGCGAGGCACACAACAAACTGTACCCATATAGATCGGATGAAAGACGAAACCTTCTTTGCGACAGAGAGCGAGGGGCCATGGAGCCGACAACTAGCCGTAACACCACCACAGCGCAGGTCAGCAGATGGGGGCTAATTAAAGTGAGGGCGTTGGTGAACGCGCACCAGTCGGTCGTGTTCCTGGCGCACAACGTGGTCGGCTACCTGCTCATGTTAGCGGTCATGGTGTACAATGTGCATCTGTTGCTAGCCGTCGTTTTCGGAATGATGCTCGGATACTTTTTATTCGGCCCGAAATTAACACGACTACAGATGCAATGCCACAGAACGAAGAGAGTGGTTATATGTACACCGGAATGTGACGATACAGCCGAAACATCGACTCCACCTCTCCTGAATCACTCTGAGTCAGATTCGGACTTCTACAACTGCCAGACTCGCACTTGCATACAGCCGTCCCACTACTTTCCGTCCACGTCACAAGATGGCGCCAGTACCGAAAATAACGTAACCTGCCAGTACGGCGCCAAGAAATGCCCGTCGAAAGTTGCCAGAGCGAAAAAAGCCCAATGTCACAGTGAAAAAGAAGACAATTCAAATATAGAAGATACAAAACTACTAGTGAAAGAGCGCTCAGGCTGTTGCAAGTCGGAGCCGCCTCACGAGGAGAAATGTTGTAAAAAAGAAATTGTTGTAGTTCAAGAGCCTACGTCGTGCTGCAAGAAAGAGAAAGTAAGCGAGGAACAAGCACACGAGGAAACGAGAGAGAAGACCCCTCCGGTGACTTGCTGCAAGTCGAGCAGTACCGAGAGTCGCGAACAGATAGTTCATCCCTGA

Protein

MWMWFGYDLGDFLFSGLIISTRWAFALTWIALFFVALLFEGSKVYLAKVQREAHNKLYPYRSDERRNLLCDRERGAMEPTTSRNTTTAQVSRWGLIKVRALVNAHQSVVFLAHNVVGYLLMLAVMVYNVHLLLAVVFGMMLGYFLFGPKLTRLQMQCHRTKRVVICTPECDDTAETSTPPLLNHSESDSDFYNCQTRTCIQPSHYFPSTSQDGASTENNVTCQYGAKKCPSKVARAKKAQCHSEKEDNSNIEDTKLLVKERSGCCKSEPPHEEKCCKKEIVVVQEPTSCCKKEKVSEEQAHEETREKTPPVTCCKSSSTESREQIVHP

Uniprot

H9JEK5 A0A2H1WWU5 A0A2A4K7J8 A0A1E1W3Z1 A0A3S2LWF9 A0A212FB94 + More

Pubmed

19121390 22118469

EMBL

BABH01003237 ODYU01011611 SOQ57457.1 NWSH01000087 PCG79743.1 GDQN01009359 + More
JAT81695.1 RSAL01000001 RVE55217.1 AGBW02009363 OWR51000.1

Proteomes

UP000005204 UP000218220 UP000283053 UP000007151

PRIDE

H9JEK5

Pfam

PF04145 Ctr + More
PF08245 Mur_ligase_M

Interpro

IPR007274   Cop_transporter        + More
IPR013221   Mur_ligase_cen
IPR001645   Folylpolyglutamate_synth
IPR036615   Mur_ligase_C_dom_sf
IPR023600   Folylpolyglutamate_synth_euk
IPR018109   Folylpolyglutamate_synth_CS
IPR036565   Mur-like_cat_sf

SUPFAM

SSF53244 SSF53244 + More
SSF53623 SSF53623

Gene 3D

3.40.1190.10 3.90.190.20

ProteinModelPortal

H9JEK5 A0A2H1WWU5 A0A2A4K7J8 A0A1E1W3Z1 A0A3S2LWF9 A0A212FB94 + More

PDB

6M98 E-value=2.89297e-05, Score=112

KEGG

101736188 K14686 solute carrier family 31 (copper transporter), member 1 | (RefSeq) uncharacterized LOC1017361

GO

GO:0016021 GO:0005375 GO:0005524 GO:0004326 GO:0043565 GO:0005057 GO:0007165 GO:0016620 GO:0006418 GO:0003676 GO:0016876 GO:0043039 GO:0035434

PANTHER

PTHR12483 PTHR11136 PTHR11136:SF5

Length:

328

Number of predicted TMHs:

3

Exp number of AAs in TMHs:

58.33668

Exp number, first 60 AAs:

22.15781

Total prob of N-in:

0.03239

POSSIBLE N-term signal

sequence

outside

1 - 19

TMhelix

20 - 42

inside

43 - 106

TMhelix

107 - 126

outside

127 - 130

TMhelix

131 - 153

inside

154 - 328

Pi

231.477742

Theta

187.220061

Tajima's D

1.270865

CLR

0.077862

CSRT

0.732963351832408

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics