SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08629  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007956
Annotation
PREDICTED:_innexin_inx7_[Papilio_xuthus]
Full name
Innexin       + More
Innexin inx7      
Alternative Name
Gap junction protein prp7
Pas-related protein 7
Location in the cell
PlasmaMembrane   Reliability : 4.516
 

Sequence

CDS
ATGTTAGTCGCGTCGCTTAACAGTCTCTCGCCGCGGCTGCGGTTCCAATTTAGCAAACCGAAGATCGAGAATGTGGCCTTCAGGCTGCATTACCAGCTGACTGTGACGATTTTGCTGGCTTTCGTGATCCTGGTCTGCGCTAGAGAGTATTTCGGGGATCACATCAAATGTCTTTCGGATCAGGGTGTGCCCGACCATGTAATTCAGACGTACTGCTTCTTCATGGCCACTTTTACAATAGTTCGTCATTACAACGAGAGTCTACTTCAAGGAGAGTTCCTGCCTCATCCCGGAGTAGGGCCCATCCTTGCCACAGACGAGACCATCCACCACACGTATTACCAGTGGGTACCTTTCGTACTCTTCATCCAGTCTATATGCTTCTACCTGCCTCATTACATATGGAAGACAAAAGAAGGTGGCAGGATAAAGGCCCTGGTTGACGGACTCCAGTACGCCGGACTGGCGCTCCACGACGACGACATCACCGTCAACGGCACCACAGTACCTTCAAAGAAGACCCTCGAAAACAAACTGGATTCAATTAGGAAAGACATCATATTAAGGTTGAAGATATCGAGGACGTGGTCGACTTGGCTCGTCTCCATGGAGGTCGCGAATCTGCTGCACGTCATGTTCCAGGTGTGGGTGATCAACAAGTTCCTAAACGGGGCGTTCATGTCACTAGGCCCCAGAGTACTCGAAACGAAAGACTGGAGCCACATAGTCGATCCGCTGGAGCTTGTGTTTCCGAAGGTAACGAAGTGCATCTTCCACAAGTACGGTCCGAGTGGCTCAATCCAGCAACACGACGCGCTCTGCGTAATGGCCCTCAATATAATCCACGAGAAGATCTACACAGTGCTTTGGTTCTGGCTGCTTTTCCTTTTCATTGTCTCCTTATTGGCTGTGATATGGCGGGTAATTTCGTTTTTCCTGTACCGCCGGTCGCTGCGGTTCAACGAGATGATGTTCCGTCACGTGAGCAACGCCAAGTTCAACCCGTACAACGTCATCAGGGTGGTCAACGGCTGCGAGTTCGCCGATTGGCTCTTCCTCTATTACCTTGCGAAGAATATGCAAGGCTTTGTATTCCAGGCACTATTTGTGCGATTAGCGGAGGAGTTGGAGAAAAGAGAACTGCCTTACGATGACCAAGGCACGGAGGAGAAGGGAGCTGAACCAATATTAGTCGGAAAAGTAGATATTGACGACGAAACTATGCCGTTAAAAAGAGATAAGAAATCATCGTGA
Protein
MLVASLNSLSPRLRFQFSKPKIENVAFRLHYQLTVTILLAFVILVCAREYFGDHIKCLSDQGVPDHVIQTYCFFMATFTIVRHYNESLLQGEFLPHPGVGPILATDETIHHTYYQWVPFVLFIQSICFYLPHYIWKTKEGGRIKALVDGLQYAGLALHDDDITVNGTTVPSKKTLENKLDSIRKDIILRLKISRTWSTWLVSMEVANLLHVMFQVWVINKFLNGAFMSLGPRVLETKDWSHIVDPLELVFPKVTKCIFHKYGPSGSIQQHDALCVMALNIIHEKIYTVLWFWLLFLFIVSLLAVIWRVISFFLYRRSLRFNEMMFRHVSNAKFNPYNVIRVVNGCEFADWLFLYYLAKNMQGFVFQALFVRLAEELEKRELPYDDQGTEEKGAEPILVGKVDIDDETMPLKRDKKSS

Summary

Description
Structural component of the gap junctions.
Structural components of the gap junctions.
Similarity
Belongs to the pannexin family.
Keywords
Alternative splicing   Cell junction   Cell membrane   Complete proteome   Gap junction   Ion channel   Ion transport   Membrane   Reference proteome   Transmembrane   Transmembrane helix   Transport  
Feature
chain  Innexin
splice variant  In isoform B.
EMBL
GDQN01009566    GDQN01005453    GDQN01001937    JAT81488.1    JAT85601.1    JAT89117.1    + More
KQ460497    KPJ14318.1    KQ459596    KPI95360.1    AGBW02009200    OWR51393.1    RSAL01000001    RVE55225.1    NWSH01000281    PCG77802.1    MG000945    AVM81263.1    ODYU01010875    SOQ56254.1    RVE55226.1    NNAY01003541    OXU19235.1    GL435038    EFN74127.1    GEZM01065084    JAV68563.1    KQ976885    KYN07540.1    ADTU01023369    KB632184    ERL89626.1    KQ976419    KYM89301.1    APGK01048500    KB741112    ENN73824.1    KK107087    EZA59867.1    KQ982335    KYQ57518.1    KQ982021    KYN30556.1    GL888199    EGI65323.1    AAZX01003107    GL449233    EFN83093.1    GEZM01091116    GEZM01091114    JAV57085.1    QOIP01000001    RLU26915.1    KQ435762    KOX75477.1    KQ434769    KZC03794.1    KQ414663    KOC65364.1    JRES01001325    KNC23626.1    GBYB01001505    JAG71272.1    NEVH01025142    PNF15719.1    AXCN02001521    KK853092    KDR11526.1    GBXI01001461    JAD12831.1    GDHF01022115    JAI30199.1    KA646329    AFP60958.1    GFDG01000593    JAV18206.1    GBYB01012713    GBYB01012716    JAG82480.1    JAG82483.1    EZ423285    ADD19561.1    CCAG010000781    APCN01000876    AAAB01008987    EAA43180.3    GAMC01009999    GAMC01009998    JAB96557.1    AXCM01008205    GAKP01015931    JAC43021.1    KQ980824    KYN12491.1    GBYB01012714    JAG82481.1    GFDL01006838    JAV28207.1    KJ736827    CH477518    AIF75099.1    EAT39624.1    ADMH02001846    ETN60917.1    AJVK01014292    AJVK01014293    GFDF01000947    JAV13137.1    UFQT01002269    SSX33052.1    UFQT01000188    SSX21348.1    SSX21347.1    AJWK01031778    ATLV01017403    KE525167    KFB42165.1    LJIG01002374    KRT84566.1    JTDY01007762    KOB64959.1    GBYB01001503    GBYB01001504    GBYB01001506    JAG71270.1    JAG71271.1    JAG71273.1    JXJN01001234    KZ288311    PBC28517.1    ABLF02020775    CVRI01000024    CRK92218.1    CM000162    EDX02416.1    CH933811    EDW06323.1    KQ971380    EEZ97261.2    CH902621    EDV44436.1    CH480839    EDW49336.1    CM000366    EDX17299.1    KYB25015.1    DS232218    EDS37779.1    CH379064    EAL31970.1    AF137270    AE014298    AY051561    BT099510    CH940655    EDW66022.1    OUUW01000016    SPP88802.1    CH916371    EDV92023.1    CH964239    EDW82128.1    CH479204    EDW30500.1   
Pfam
PF00876   Innexin
Interpro
IPR000990   Innexin       
PDB
5H1R     E-value=5.83309e-15,     Score=197

Ontologies

Topology

Subcellular location
Cell membrane  
Cell junction  
Gap junction  
Length:
417
Number of predicted TMHs:
4
Exp number of AAs in TMHs:
100.36733
Exp number, first 60 AAs:
21.19256
Total prob of N-in:
0.30194
POSSIBLE N-term signal
sequence
inside
1  -  28
TMhelix
29  -  51
outside
52  -  112
TMhelix
113  -  135
inside
136  -  195
TMhelix
196  -  218
outside
219  -  287
TMhelix
288  -  310
inside
311  -  417
 
 

Population Genetic Test Statistics

Pi
207.505214
Theta
180.873097
Tajima's D
2.058028
CLR
0.641524
CSRT
0.890555472226389
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 LAEELEK 100.00 2e-04
28556443 TLGFVLLR 100.00 2e-04
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