SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08626  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007628
Annotation
PREDICTED:_uncharacterized_protein_LOC106708416_[Papilio_machaon]
Location in the cell
Extracellular   Reliability : 3.849
 

Sequence

CDS
ATGTCGTTGAAAACGCTAGTCTTCTGTGTTTGCGTCACTTTAGCTTCGGCGGCGATCCAGCGCTCTGCTTTGGAGCCAATCCCTGATAAATTTAATGGCCTTCAAGGCTGTTACATCAGGGAGTTCGATGGTGTCCTTCCCTTTGATTCTGTAACATACTCGAAGGAAGCAGAATGCACCCGATACTTCTGCGCGCACGATGCTGTCATACACCAATCGTGTAAAGATGAGCTGAGCAGCGACACCCCTGTGTGTACCTTTACAAAGCCAGAAGAAAATACTCACATAATCTGCGTTCTTTAA
Protein
MSLKTLVFCVCVTLASAAIQRSALEPIPDKFNGLQGCYIREFDGVLPFDSVTYSKEAECTRYFCAHDAVIHQSCKDELSSDTPVCTFTKPEENTHIICVL

Summary

Pfam
PF15430   SVWC
Interpro
IPR029277   SVWC_dom       

Ontologies

GO

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.990310
 
 
Length:
100
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.51792
Exp number, first 60 AAs:
1.51792
Total prob of N-in:
0.19285
outside
1  -  100
 
 

Population Genetic Test Statistics

Pi
262.608935
Theta
157.852949
Tajima's D
2.043489
CLR
0.483294
CSRT
0.890255487225639
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
Peptides ×
Source Sequence Identity Evalue
25044914 YFASEIAQTITSK 100.00 1e-04
24093152 YEVVNGR 100.00 1e-04
24402669 YFAHNCENFPVPHHTQR 100.00 1e-04
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号