Gene

KWMTBOMO08623

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC105841899?_partial_[Bombyx_mori]

Location

Bomo_Chr15(-):1166583-1168963      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.672

CDS

ATGAAGCCTGCAAAGGTTTTCAAAAACATCGCCAACGCGTTCAACACCTTGCCCTGGTCGGTGATCGCAGGGGCGCTGGAGTATCACGGCGTCCCTGCGTATCTCCGTCGGCTGATCGGGTCCTACCTCGAGGACAGGTCGGTCGTGTGCACCGGGCACGGTGGGGCGGTGCTCCGCTTCCCCGTCCAGCGCGGTGTTCCACAGGGGTCGGTCCTTGGCCCTCTCTTGTGGAACATCGGCTACGACTGGGTCTTGCGTGGCGCCCTAAGCACTCCTCTCCCGGGTCTGAGCGTAGTTTGCTACGCGGACGACACTTTGGTCGTGGCCCGGGGGAGGGACTTGCGAGAGTCTGCCCGTCTTTCCTGCGCGGGGGTGGCCTTCATCATCGGCAGGATCCGAAGGCTGGGTCTGGAGGTGGCGCTCGATAAATCCCAGGCCCTGTTGTTTCACGGGGCTCGGAGAGCGCCGCCTCAGGGGGCCCACCTCGTGATCGGAGGCGTTCGCGTCGAGATCGAGGCGACCGGGTTGCGGTACCTCGGTCTCGTACTGGACGGTCGTTGGAGCTTCCGCGCTCACTTTGAGAGATTAGGTCCCCGACTGATGGCGGCCGCCGGCTCGCTGAGTCGGCTGTTGCCGAACGTCGGGGGGCCTGACTTGGTGGTGCGCCGCCTCTACACGGGGGTGGTGCGGTCGATGGCACTGTACGGGGCTCCCGTGTGGTGCCACGCCCTGACCCGCGACAACATTGCGGCGTTGCGACGTCCGCAGCGCGCGATTGCGGTCAGGGTGGTTCGTGGATACCGCACCGTCTCGTTCGAGGCGGCGTGCGTGCTAGCTGGGACGCCTCCCTGGGACCTGGAAGCGGAGGCGCTCGCTGCGGATTACGCGTGGCGATGCGATCTCCGCTCCAGGGGGGAGCCGCGTCCTGGCGCGGCGGAAGTGCTCACGGGACACGGCTGTTTCGGTCGCTACCTGCACCTCGTCGCCCGGAGGGAGCCGACTCCGAAGTGCCACCACTGCAGTGGCTGCAACGAGGACACGGCGGAGCACACGCTCGCGTACTGCCCCACTGTCCTCGTTGCAAAAATAGGACCGGACTTGTCGCTTCCGACCGTCGTGGCTACGATGCTCGGCAGCGACGAGTCCTGGCAGGCGATGCTCGACTTCTGCGAGTCCACCATCTCGCAGAAGGAAGCGGCGGAAGGGAGAGCTCTTCTTCCCTCTCGGCGCCGTGCCGCCGCCGTCGGGCCGAGGGCCGGAGGAGGGCGTTTGTCCAGCTCCAGCCCCTATGAGGAGGCAGTCTCCTCCCGCGCGCTGGCACCAGGAGAACGGGACGGCGCGTCGGCGGCTGCGGACTGCGATGCGGTCCGCATTTTCGTCGTCGCTGTCGTCGCCGAACATACTGTTGAAGAGCAACCCGGTCGGCGGTGTATCGCGTTCCGACCCGGCAGGCTGGTTCTGGCCCAGCGGGGTATCCCGGAACACCAGCGGCACCGCCCGGGCGGCCTGGTAGGGCCGCCGTACCGCGGAGACTGA

Protein

MKPAKVFKNIANAFNTLPWSVIAGALEYHGVPAYLRRLIGSYLEDRSVVCTGHGGAVLRFPVQRGVPQGSVLGPLLWNIGYDWVLRGALSTPLPGLSVVCYADDTLVVARGRDLRESARLSCAGVAFIIGRIRRLGLEVALDKSQALLFHGARRAPPQGAHLVIGGVRVEIEATGLRYLGLVLDGRWSFRAHFERLGPRLMAAAGSLSRLLPNVGGPDLVVRRLYTGVVRSMALYGAPVWCHALTRDNIAALRRPQRAIAVRVVRGYRTVSFEAACVLAGTPPWDLEAEALAADYAWRCDLRSRGEPRPGAAEVLTGHGCFGRYLHLVARREPTPKCHHCSGCNEDTAEHTLAYCPTVLVAKIGPDLSLPTVVATMLGSDESWQAMLDFCESTISQKEAAEGRALLPSRRRAAAVGPRAGGGRLSSSSPYEEAVSSRALAPGERDGASAAADCDAVRIFVVAVVAEHTVEEQPGRRCIAFRPGRLVLAQRGIPEHQRHRPGGLVGPPYRGD

Uniprot

Q868Q4   A0A2W1B333   A0A0J7JZ13   A0A0J7JZF7   A0A0J7KIW1   A0A0J7KJG6   + More
A0A0J7KLH8   A0A0J7KJH4   A0A0J7KF37   A0A0J7KYD2   A0A0J7KLT9   A0A0J7KIM6   A0A0J7KPZ3   A0A2H8TIT6   A0A0J7KCZ9   X1WMW4   J9LJ80   J9LVU7   A0A0J7MY17   A0A2H8TIE5   A0A2S2PEZ7   A0A0J7NIB5   J9JWJ3   A0A2M4BDI3   A0A2M4BBV9   X1XNG1   Q868S4   A0A2S2P488   A0A2M4BC01   D6WC19   F7IYV7   J9LBB9   T1DCM0   W8ANK7   W8ADE4   Q9N9Z1   A0A0J7KP02   F7IYV5  

Pubmed

12644555    28756777    18362917    19820115    24330624    24495485    + More

EMBL

AB090825    BAC57926.1    KZ150386    PZC71062.1    LBMM01019839    KMQ83438.1    + More
LBMM01019838    KMQ83439.1    LBMM01006725    KMQ90373.1    LBMM01006671    KMQ90407.1    LBMM01005948    KMQ91066.1    LBMM01006657    KMQ90417.1    LBMM01008448    KMQ88867.1    LBMM01002052    KMQ95336.1    LBMM01005733    KMQ91252.1    LBMM01007036    KMQ90099.1    LBMM01004505    KMQ92346.1    GFXV01002242    MBW14047.1    LBMM01009527    LBMM01009515    KMQ88059.1    KMQ88067.1    ABLF02059310    ABLF02015311    ABLF02015320    ABLF02034009    ABLF02043484    ABLF02034925    LBMM01014122    KMQ85315.1    GFXV01002090    MBW13895.1    GGMR01015159    MBY27778.1    LBMM01004603    KMQ92250.1    ABLF02013358    ABLF02013361    ABLF02054869    GGFJ01001727    MBW50868.1    GGFJ01001369    MBW50510.1    ABLF02043108    AB090815    BAC57906.1    GGMR01011682    MBY24301.1    GGFJ01001370    MBW50511.1    KQ971309    EEZ99146.1    AB593327    BAK38648.1    ABLF02020562    GALA01001777    JAA93075.1    GAMC01020517    JAB86038.1    GAMC01020519    GAMC01020515    JAB86040.1    AJ278684    CAB99192.1    LBMM01004906    KMQ92001.1    AB593325    BAK38646.1   

Proteomes

UP000036403    UP000007819    UP000007266   

PRIDE

Q868Q4    Q9N9Z1   

Pfam

PF14529   Exo_endo_phos_2        + More
PF00078   RVT_1

Interpro

IPR000477   RT_dom        + More
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       

SUPFAM

SSF56219   SSF56219        + More
SSF57756   SSF57756       

Gene 3D

3.60.10.10    

ProteinModelPortal

Q868Q4   A0A2W1B333   A0A0J7JZ13   A0A0J7JZF7   A0A0J7KIW1   A0A0J7KJG6   + More
A0A0J7KLH8   A0A0J7KJH4   A0A0J7KF37   A0A0J7KYD2   A0A0J7KLT9   A0A0J7KIM6   A0A0J7KPZ3   A0A2H8TIT6   A0A0J7KCZ9   X1WMW4   J9LJ80   J9LVU7   A0A0J7MY17   A0A2H8TIE5   A0A2S2PEZ7   A0A0J7NIB5   J9JWJ3   A0A2M4BDI3   A0A2M4BBV9   X1XNG1   Q868S4   A0A2S2P488   A0A2M4BC01   D6WC19   F7IYV7   J9LBB9   T1DCM0   W8ANK7   W8ADE4   Q9N9Z1   A0A0J7KP02   F7IYV5  

KEGG

101737582    no KO assigned | (RefSeq) uncharacterized LOC101737582

GO

GO:0003964   GO:0016021   GO:0003676   GO:0008270   GO:0004519  

Length:

511

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.96775000000001

Exp number, first 60 AAs:

2.91983

Total prob of N-in:

0.13969

outside

1  -  511

 

 

Pi

0.204735

Theta

1.857583

Tajima's D

-2.064798

CLR

14.428757

CSRT

0.00419979001049947

Interpretation

Possibly Positive selection