Gene

KWMTBOMO08618  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007622

Annotation

PREDICTED:_nuclear_pore_complex_protein_Nup205_[Amyelois_transitella]

Location

Bomo_Chr15(+):985903-1013316      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.027 Nuclear   Reliability : 1.38 PlasmaMembrane   Reliability : 1.058

CDS

ATGGAAATCAACGAAGGCAATACCACAGACGATCTGTGGACGCCCTACAAAGAGTTGGTGTCTGTAGTGGAGAGTTATCTTACACATGAGAGTGGTGGGGCCCTTTATGCTGTACACACCTTTGAGTCAGTTCTTAGAAGACACAAGCAAACATTTCTAGCTTTATTTAAGAATCCACCAAAAAACCTGGCAAGCAGGGAGGAACTAAAGAGGGGTATGACTGAAGGTATCACACTGCCTAGCATAGGGAGGACCATCATATCTAAAGAACTTGTGGATGAAGCTATCATTATATCAGATATGTTCAATGTGAATGAATACCTTGCATTAGAGCTGCTTCATACAGCACAGCGACAGTTACCACGTCACCCTGGTCTGCCACGAGGCCTTGTGGCCGTTTTGCTGTACTATGATGGACGTAGAGCACTTGTGCAGGCATTAAAAGAACTATGCATGGCCAGAGAAGGTGTTTGTTGGTCAATATCGGCACGTGCGGAGGTAGTGTGGTACGTGAGCCGCTACGTGGAGCAGGCGTGCAGTGGGGGGCTGGGTGCGGGCGTGCTGGACGCGTTGCCGCGCTGCGACGTGCGGGCCACGCTCGACCTGCTGCACGCGCACCGCGCCGCGCCCCCGCATCCCCACCTCGCCAGGCTGTGCGCCACCCTCAATGATACTAGGAAACTATTGGCAAGTGTGCTGTTTACTTTATCAGCACAACGTGGACTGGAAAGAGACTTACTACTTCGAATACTGTCAGAACAAAGCACATCCCCATCCCTCGGTCCCACCGGTGCTTTAGATGAAGTCTCTCTCGCGCTACACATGGCGCTGTTGTACGCTTTGGACTTGTCGGTATTGCACAGACGAGAAGACGGCGAGGAACTAGCAAAGAAGCTGCCATTGATCCAAGATCCGGAACTGATATCGGTGCTGGTGGAGGAGCTGAGCCCGCAGCAGCCGGCGGCGGGCGGCGCGCGTGCGCTGTGCCAGCTCGCGCTCGGCCTCGCGCTGGCCGCCCTCAAGCGGGCCCCCGCGCCGCACTGCCCCGCGCCCGACCTGCTCGACCACGACGAGACGCTGGTCGACGCTGCCATCGACGCCAAGGTGTTCGAGTACCTGGACGAGGCGATACTCTCGACAGACTACGTGGCCAAAGAGGAGTATTACCAGCGCCGCATACACTCGCTCATCACCGACTTCATAGTGCTGATGCACTCCAAGCTGATGGAGATGAGAGTCAAGGCGGACGAGGCGGCGCGCTCGGTGCAGGCGTACGCGCTGGAGGGGCTGGCGGCGCCGGGCGGCTCGCGCACGCGCCTGGACGCGCTGCTGCGCTGCGTGCGCCGCCTGTACGCGCGCGACCCGCACCGCCTGCGCGACGACTACTGGCAGCCGTGCCGCCCCGCGCACCAGCCGCGTTGGGGCGGACGCGCGGCCTCGCTGTACAAGTTCGTGCGGGGCGCCGCCTCCAGCGCGGCGCTGCAGGCCATGGCTTCGCTCGCCGTCTGCACGCACACCTGGGCGCTGCTCTCCCGCCGCGACGCGCTCTCCGCGCACCACATGCTGCTCGCACTCGCCAGATACCACTCGAACCTGCGCACGGACCACGCGCCGTTCTCGGACGCGCTGCACTCCTCGTCGCTGGGAGCCACGGCCATCGTCACTCCAGCAGCCAGACCGGGGAAACTGCTCATCCGACAGGAAGAGGTGGAGGCGATGATAGCGGCGCTGCAGCTGCTGGCGGGGGTGGCGCGCGAGGACCAGGCCGCGGCCGCCGCCATCTGCGAGAACCTGCAGTGGGACGCCGTCAACAACATGTTCGGGCTGATGTGCTGCCACATACCGTTGCAGCTGAAGGCGGAGCTGTGCCTGACGCTGGCGGCGCTGGGCGGCTGGCCCTGCACCGCGCCGCGCCTGTGGGCCGGGCTGGAGGCCGCCCGCCTCGTCTCCCTCACCAACGACAAGCGGGCGCTCAACGCTGAACTGCAGGAGGTGGAGTGCCGCATCGAGGAGTACCCGCTGTCGCGCGCCTTCCTGTCGCTGCTGCAGTCGCTGAGCGCGGCGCCTCCGCCCCGCACGCTGGCGGCCGGCGTGGAGCCCTACGTGCAGCACGCGCTGCTGCGCCTCGCGCTGCCGGCGCCGCACCGCCCCTACGCCCGCCCGCACGAGAAGTGGCAGATCCTATCGCAGTGCTTCCGGCTGTTCGGCACGTGGCTGGAGCAGTACACCCCCTCCCCCGCGGACTTCCCCTCCGCGGGCGGAGACGCGGAGTGTCCGGCGCCGCCCGGCTTCAGGATCCTGCTGCAGCTGCACACCAAGTCCGAGCTGCTGCGGCTCCTGCTCTCCTCGCTCGACCAAACCTACGAACTGCTCGAGAAGCAGCCTGGATCTGCGAATGAGTACGTGGAGCAGTGCCTCATTAGCGTCCTAGAGATGCTGGAGCGCGCACTCGCCCTCGAGCGGGAGCTGGGCGCGGCGGCGCTGGAGGCGGGGAAATCTGTCATTATCATCGGGCTTTCTAAACTTATACTCGAGTCTGAGAGCGCGGAGAGCGGCTGCCGACTGCTGGCGTGCTGCCGCGTGGCGGGGCTGGCCGGCGCCGCGCCGCTGCCCGCCAGCCGCGCCGTGCAGCTGCTGTGCCGCGCCGCGCTGCAGCCGCCCGCCGCGCGACACGTGCTCGCCGCCGCCACGCGCACGCCCGCACTCGCCGCGCAGATCCGACACGGGTTCGTGGAGTGCTTGGAAGCGGAGGAGTGGAGGAGCGGGGGCGGCGGGGAGGACGCCGCGCTGCGCCGCGCCAAGGAGGGCGTCCTCTCGCTGCTGCACCACGTGCTGCCCGCGGCCCCTCCCAACTTTGCGCACTTCCTACTGGGATACCAGCTCACTGAAGACATATCCCGGAGTGCCATCCACGAGCCGGGAGTGGCGGGCTTCCCCCGGACCTGCCTGCACTCCATACTGGACCTGCTGGACCAGCACATCGCCGGACACTCTCCCAACAGAGAAGCGACCGACTTAGTCGAGAGCTGCTACCGCCTGGTGTACCGGCTGTGCGCGAGGCCGAACACCTCAGCACCGACGCTGCGCTTCCTGAGGTCCAGGGACTACTTCCTGTGTAGACACGTCAAGCACAACGTCGACCTTAAGAGTGCGTCGCCCGTGACCGTGTCGGCGCGCTCGTGGGTGCTGCGTGCGTGCGCGTGCGCGGCGGGCGCGGCGGCGGGCGCGGGTCAGCACGCCGCGCTGGCCGCGCTGCTGGCCGCGCTCACGGGCCGCAGCGCCGTCGCCGCGCCGCCCGCGCAGGACTGGGAGTGGTGCCTGCTGCGCCGCACGCTGGAGGAGCTGCCGGTCGCCGTGCAGGAGGTGCGCGAGCCGCGCTGGGAGCTGTTCCACGCGCAGCAGCTGCGACAGGCCATCGCATCCTGTGACCTGCCCACAGGTGGGGGCGGGCGGCGCGTGAGCGTGTCGCGGGTGCACGCGCTGCTGGCGCGCGAGCTGGCCGCGCTCAACGCCACGGCGCCGCAGAGGAACCTCGTCAAACTAGAAATACAAAAGGTCTTAGACTACGTAACGGAGGTGAACCGCCAGCGCAACCTCGCCGCCACGCTCACCCACTACTACGACTCGTGGCGTCAGCTCACAGAGATGCTGTTCTGTGTAGCTCCTCACGACATCCTCAACCTCGAAGCCAGGAAGAACTTGCTGCTCAATATCCTACAGGACCTACTCAACAAGATACCGCCCGACGAGGTCCTGCCGCAGCTCGGCAACCTGGCCTCGGGCACCGTACTGCTGCTGATGGTCAATCTGCGCCACTGCTACATCTTACAGAAGCGGGAATCGAACCTCGCGTCTTCGGAATTCGAGACTTCATTCTTCGGGCCGTCAAATCAGATCATGCAAACCAATTCGTTGACGTTAAAATTCATACTAAACAAAATATTGAGCTGGATACTGGTGTCAGGCGGGGCTAGTCAGAACATGCGGGTCAACCTGTACGGAGCCCTGCTCAACTACTTGAACATAGTGAACCTCAAGCCCAGTCCAGCGGAGCCCGAGCAAGAATTGAACGACACGTACGTCAGCAGGCTCGACAGTTCCAAAGCGAAGGAGAAGAGCGAAGATTCGTCTCTGAAGGCCATGGTGGTGGATGTGATCAGTGAATTCGGCGAGAACTTGTGTGCGATAGTGTGCGGCGACTGTATAAGTGCGGGGCAGGACGTGTGCAGGATGGTGGCGCTGGCCTGCCTGGAGACGCTCATTGAAATCAATCCTCGGACTGACTGGATGAATGTACTCATCAATCAAGGCTATTTGAGGAGTTTGATCGACAGTCTGCTGCAAGACGATGAAGGCCTAAAGGAGGCACTTGAACCGAACCCGAAGTCACTCCGAGTGTTGTACGTGTACGAATCGAAGATGGCGCTGCTGATCAAGATGGCGGGCACTAGAGTGGGCGCCGAGACGCTGCTGTCCCAGGGCGCGCTGTCCACCGTCGCCAACCTGCAGGCGCTGGACTGCCACCCCGACGTGCACACCGGCTACGAGCAGCACCCCGACACTGACTTCATACCGTCGGTCGCCAAAAGGTTCCGCCAGATGTTGGTGCCGGCGCTGTCGCTGAGCTCCGCGCTGCTGAGCGCGCTCGGCGCCCGCAACCACAGCTGCGTCGTGCTCGTCATGCACGCGCTGCTGGCGCACCGCAACACCGTCGAGCTCGTGCTGAGGGCTTCTCACCCGAGCTCGTCCCCCGGGCTGCTGGTGGAGGTGGAGGCGGTGACGTCAGTGGTGTCCCGGGCGTCGTCTCGTGACCTGCTGGAGCAGCTCCCGGCGGCGGCCGCGCTGCGCCCCCTCATGCTGCAGCTCCTCACGCGCTTCCACACCCACCAGCTTCGACCGGACGACGACGACGACTCGCAGGCGAACCTGCTGTACTATAAGATCGTGTGCAACCTGCTGACGTACGGGCGCAACATGATGTCGCTGGACGCGGGGCGCGAGGCGGCGGCGTGGGGGGCGGCGGCGCCGTGGGGGGGCGCGGAGCCGTGGGGCGGCGTGGCGGCGTGCGGCTGCCTGTTGCGGCTGCTGCAGCTGGGCGTGACGCGCGTGCAGCACCACGACAAGCTGCTGGCCACCGCGCACCACCAGCTGCACGCGCTGCCGACGATGACTCTGGACGAGATGCAGAAGCTGGTCCCCGGCGAGAGCTCGGCGCGCGCGGCGCGGGCGGGCGCGGGGCGGGCGGCGCGGGCGCGGGCGGTGCGGCGCGCGGCGGAGGGCGCGGCGGCGCGCGTGCTGGTGGAGGCGGCCCTGCACCTGCTGTGGGCCCACGCGCTCGTCTACCTGCGGCTGGCTGTGCCCGAACACTCGCTCGAGCGGCTGGAGGCGGCGGCGGCGCGGCGCGGGGCGGGCGGCGCCGAGCTGCCCGAGCTCAAGAAGGAGCTGGTCGCCGTCTTCAACGACAGGTTCACGGACCAGCTGCTCGACGTCGCTAAGAACCAGCCGGCGATGAACAGGAACTTCTTGGAGGTGCTGGTGAAGGACATCAAGAGCATGGTGCAGTTCTCGCCGCTGTGA

Protein

MEINEGNTTDDLWTPYKELVSVVESYLTHESGGALYAVHTFESVLRRHKQTFLALFKNPPKNLASREELKRGMTEGITLPSIGRTIISKELVDEAIIISDMFNVNEYLALELLHTAQRQLPRHPGLPRGLVAVLLYYDGRRALVQALKELCMAREGVCWSISARAEVVWYVSRYVEQACSGGLGAGVLDALPRCDVRATLDLLHAHRAAPPHPHLARLCATLNDTRKLLASVLFTLSAQRGLERDLLLRILSEQSTSPSLGPTGALDEVSLALHMALLYALDLSVLHRREDGEELAKKLPLIQDPELISVLVEELSPQQPAAGGARALCQLALGLALAALKRAPAPHCPAPDLLDHDETLVDAAIDAKVFEYLDEAILSTDYVAKEEYYQRRIHSLITDFIVLMHSKLMEMRVKADEAARSVQAYALEGLAAPGGSRTRLDALLRCVRRLYARDPHRLRDDYWQPCRPAHQPRWGGRAASLYKFVRGAASSAALQAMASLAVCTHTWALLSRRDALSAHHMLLALARYHSNLRTDHAPFSDALHSSSLGATAIVTPAARPGKLLIRQEEVEAMIAALQLLAGVAREDQAAAAAICENLQWDAVNNMFGLMCCHIPLQLKAELCLTLAALGGWPCTAPRLWAGLEAARLVSLTNDKRALNAELQEVECRIEEYPLSRAFLSLLQSLSAAPPPRTLAAGVEPYVQHALLRLALPAPHRPYARPHEKWQILSQCFRLFGTWLEQYTPSPADFPSAGGDAECPAPPGFRILLQLHTKSELLRLLLSSLDQTYELLEKQPGSANEYVEQCLISVLEMLERALALERELGAAALEAGKSVIIIGLSKLILESESAESGCRLLACCRVAGLAGAAPLPASRAVQLLCRAALQPPAARHVLAAATRTPALAAQIRHGFVECLEAEEWRSGGGGEDAALRRAKEGVLSLLHHVLPAAPPNFAHFLLGYQLTEDISRSAIHEPGVAGFPRTCLHSILDLLDQHIAGHSPNREATDLVESCYRLVYRLCARPNTSAPTLRFLRSRDYFLCRHVKHNVDLKSASPVTVSARSWVLRACACAAGAAAGAGQHAALAALLAALTGRSAVAAPPAQDWEWCLLRRTLEELPVAVQEVREPRWELFHAQQLRQAIASCDLPTGGGGRRVSVSRVHALLARELAALNATAPQRNLVKLEIQKVLDYVTEVNRQRNLAATLTHYYDSWRQLTEMLFCVAPHDILNLEARKNLLLNILQDLLNKIPPDEVLPQLGNLASGTVLLLMVNLRHCYILQKRESNLASSEFETSFFGPSNQIMQTNSLTLKFILNKILSWILVSGGASQNMRVNLYGALLNYLNIVNLKPSPAEPEQELNDTYVSRLDSSKAKEKSEDSSLKAMVVDVISEFGENLCAIVCGDCISAGQDVCRMVALACLETLIEINPRTDWMNVLINQGYLRSLIDSLLQDDEGLKEALEPNPKSLRVLYVYESKMALLIKMAGTRVGAETLLSQGALSTVANLQALDCHPDVHTGYEQHPDTDFIPSVAKRFRQMLVPALSLSSALLSALGARNHSCVVLVMHALLAHRNTVELVLRASHPSSSPGLLVEVEAVTSVVSRASSRDLLEQLPAAAALRPLMLQLLTRFHTHQLRPDDDDDSQANLLYYKIVCNLLTYGRNMMSLDAGREAAAWGAAAPWGGAEPWGGVAACGCLLRLLQLGVTRVQHHDKLLATAHHQLHALPTMTLDEMQKLVPGESSARAARAGAGRAARARAVRRAAEGAAARVLVEAALHLLWAHALVYLRLAVPEHSLERLEAAAARRGAGGAELPELKKELVAVFNDRFTDQLLDVAKNQPAMNRNFLEVLVKDIKSMVQFSPL

Uniprot

H9JDM5   S4PAJ2   A0A0N0PD02   A0A2H1VQT6   A0A1B0CE99   A0A151X4F2   + More
A0A1B0FYB5   E2A0N2   A0A195CLE9   A0A195EYC8   A0A158NDQ7   E2BU35   A0A0C9R7U1   A0A310SIV2   A0A0L7QV83   A0A067RMU9   A0A146KRN7   A0A0A9WH33   A0A0J7KDY1   A0A0L0CBB4   A0A026W5F8   A0A3L8E0E9   A0A0C9QQB4   A0A1A9VC80   A0A087ZWC1   A0A2A3EN32   A0A0M8ZYY6   A0A1I8PCB3   A0A1B0FGF3   A0A1A9YPK1   A0A1A9WFW1   W5NIQ6   A0A1S3MJL5  

Pubmed

19121390    23622113    26354079    20798317    21347285    24845553    + More
26823975    25401762    26108605    24508170    30249741   

EMBL

BABH01003295    BABH01003296    BABH01003297    BABH01003298    BABH01003299    GAIX01003239    + More
JAA89321.1    KQ460497    KPJ14310.1    ODYU01003885    SOQ43203.1    AJWK01008694    AJWK01008695    AJWK01008696    KQ982548    KYQ55164.1    AJVK01001002    AJVK01001003    GL435626    EFN72935.1    KQ977600    KYN01528.1    KQ981906    KYN33290.1    ADTU01012795    GL450575    EFN80809.1    GBYB01002821    JAG72588.1    KQ759851    OAD62551.1    KQ414727    KOC62474.1    KK852529    KDR21950.1    GDHC01020593    JAP98035.1    GBHO01036898    GBRD01008602    JAG06706.1    JAG57219.1    LBMM01009085    KMQ88401.1    JRES01000637    KNC29703.1    KK107436    EZA50851.1    QOIP01000002    RLU26127.1    GBYB01002822    JAG72589.1    KZ288215    PBC32549.1    KQ435821    KOX72429.1    CCAG010008765    AHAT01025815    AHAT01025816    AHAT01025817    AHAT01025818   

Proteomes

UP000005204    UP000053240    UP000092461    UP000075809    UP000092462    UP000000311    + More
UP000078542    UP000078541    UP000005205    UP000008237    UP000053825    UP000027135    UP000036403    UP000037069    UP000053097    UP000279307    UP000078200    UP000005203    UP000242457    UP000053105    UP000095300    UP000092444    UP000092443    UP000091820    UP000018468    UP000087266   

PRIDE

H9JDM5   

Pfam

PF11894   Nup192

Interpro

IPR021827   Nup186/Nup192/Nup205        + More
IPR016024   ARM-type_fold       

SUPFAM

SSF48371   SSF48371       

ProteinModelPortal

H9JDM5   S4PAJ2   A0A0N0PD02   A0A2H1VQT6   A0A1B0CE99   A0A151X4F2   + More
A0A1B0FYB5   E2A0N2   A0A195CLE9   A0A195EYC8   A0A158NDQ7   E2BU35   A0A0C9R7U1   A0A310SIV2   A0A0L7QV83   A0A067RMU9   A0A146KRN7   A0A0A9WH33   A0A0J7KDY1   A0A0L0CBB4   A0A026W5F8   A0A3L8E0E9   A0A0C9QQB4   A0A1A9VC80   A0A087ZWC1   A0A2A3EN32   A0A0M8ZYY6   A0A1I8PCB3   A0A1B0FGF3   A0A1A9YPK1   A0A1A9WFW1   W5NIQ6   A0A1S3MJL5  

PDB

5IJO     E-value=3.13103e-67,     Score=654

KEGG

101737307    K14310 nuclear pore complex protein Nup205 | (RefSeq) nuclear pore complex protein Nup205

GO

GO:0005643   GO:0017056   GO:0044611   GO:0006999   GO:0032259   GO:0019843   GO:0005057   GO:0007165   GO:0016620   GO:0006418   GO:0003676   GO:0016876   GO:0043039  

PANTHER

PTHR31344:SF0  

Length:

1858

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.1819

Exp number, first 60 AAs:

0.01048

Total prob of N-in:

0.00129

outside

1  -  1858

 

 

Pi

278.385916

Theta

177.209059

Tajima's D

1.907485

CLR

0.362088

CSRT

0.864256787160642

Interpretation

Uncertain