SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08615
Pre Gene Modal
BGIBMGA007620
Annotation
PREDICTED:_uncharacterized_protein_LOC106132957_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 1.505 Nuclear   Reliability : 2.132
 

Sequence

CDS
ATGGTGGATAACAAAGCGAATCCTGACGATTTTGCTCAATACATACAATCCGTTCTTCAGCTTAATACGCTGGAGAAGATTGCTCATAATTTAGATAAAGAGCTGGAAGATTCACAGCGCATAATGCGTGAAGTAAAGTCCATGTTCGATACTATACCAAATTTACAGAATTCTAACTCAGAATCTGGTAACAATCTTAGACATGAGGACATTGCGAAGTTTTTGGACGCGGGCATGCCAAAGCTATTAATGCCGGACATGGAAGAAAACGCAATGGAAATAGATTTGGACGACGTTATAAACACAATGAAGATGTACGCTGAAGATTTGCGAAGAAATTTCATTCTCACACAACTGCAGCTAAGAGTTAATAAGGAAATAGAATGTCTAGAGTGGGAACAATATGCTTCTAGCCTGGAACAACTGGGCAAACGCCTTGCAAACATCAAGTTGAATAAGAATGATGTTAGTCCTAAGAACACAGAGTTAGAGAATAAACTGGTTCAACTGTGCCAGGATGTCAACTTGTTCACCCAGATGGTGCAGGCAAAGACAGCTCTGAGCGAAAACAGTGCAACAGTACAACCAGAGGTGAATAATCAAAATGCTTTGCAATACGAACAAATAATTGCTAAATTGCTCACAGGTATCAATGAAGTCACATATTTACTGCAGAACAAAAATTACCAGTAA
Protein
MVDNKANPDDFAQYIQSVLQLNTLEKIAHNLDKELEDSQRIMREVKSMFDTIPNLQNSNSESGNNLRHEDIAKFLDAGMPKLLMPDMEENAMEIDLDDVINTMKMYAEDLRRNFILTQLQLRVNKEIECLEWEQYASSLEQLGKRLANIKLNKNDVSPKNTELENKLVQLCQDVNLFTQMVQAKTALSENSATVQPEVNNQNALQYEQIIAKLLTGINEVTYLLQNKNYQ

Summary

Pfam
PF13456   RVT_3
Interpro
IPR036397   RNaseH_sf        + More
IPR002156   RNaseH_domain       
IPR012337   RNaseH-like_sf       
SUPFAM
SSF53098   SSF53098       
Gene 3D

Ontologies

GO

Topology

Length:
230
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00336
Exp number, first 60 AAs:
0
Total prob of N-in:
0.16032
outside
1  -  230
 
 

Population Genetic Test Statistics

Pi
175.032478
Theta
176.496923
Tajima's D
-0.421847
CLR
15.190131
CSRT
0.264336783160842
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号