Gene

KWMTBOMO08609

Annotation

PREDICTED:_uncharacterized_protein_LOC106141368_[Amyelois_transitella]

Location

Bomo_Chr15(-):935071-938032      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.808 Nuclear   Reliability : 2.08

CDS

ATGGAAGACCACCCTACTTTAGTAACTAACAATTTTACAAAAAAACGCAAGAGGAATCCAGAAAATTGGACAAGAAACCGGGCCAAGGAATTGAGATACTCAGTGAAATCATTGCCAGATAAAGTCTGCACCCATAATTCGAAAGCATTAAAATGTGCCACATTAACAATAGCTCAGTTAAAACAATTACAAGAAATATTTTATAAACATCAAAATAAAAAAGATCAAGACTCTCTAATATTAAAATATTCTTCTATTGAACCCGTGAAGCGGAGAGTAGGTTTTAATGGAGTAAAACAAACAACAATTAAATATGGCGTATTTGTACGTAATGTTAAGGTGCCAATTTGCCAGAAACTATTTTTAAGCCTGTTTAATGTAACGAAAAACAGAGTGGCGTATGTAATGAATAGATTTTTTCATGCTGGAGATATAATCATTGATGAGAGGCGAGGTGGAAGTCGCAGAGAACACTTGTATGAGGCACAAAAACTATCTGTTCATAATTTTATACAAAAATTACAATGTGTTGAATCTCATTACTGCAGGAAAACAAAGACGGCTGAAAGAAAATATTTACCCTCAAATTTGAACATCAAAAAGCTGTTCAAAATTTACAAAGACAATTGGAGAGGAATAGAAGCTTTATCTATTTATAAAGATATATTAGAAACACAGGCCGATCTTATTGCTCTTGAATTTCAGGAGCACTATTGCGAGGGGCCCTTGGAAGAGGTCAATGACATACGCATATGA

Protein

MEDHPTLVTNNFTKKRKRNPENWTRNRAKELRYSVKSLPDKVCTHNSKALKCATLTIAQLKQLQEIFYKHQNKKDQDSLILKYSSIEPVKRRVGFNGVKQTTIKYGVFVRNVKVPICQKLFLSLFNVTKNRVAYVMNRFFHAGDIIIDERRGGSRREHLYEAQKLSVHNFIQKLQCVESHYCRKTKTAERKYLPSNLNIKKLFKIYKDNWRGIEALSIYKDILETQADLIALEFQEHYCEGPLEEVNDIRI

Uniprot

A0A437BGT7   A0A437AUA2   A0A3S2N3V9   J9LJB4   A0A3P8TGH4   A0A2P8Z9P6   + More
A0A1B6LBN2   A0A1B6LBF9   A0A1B6M504   A0A3S1AS25   S4PMR1   A0A1B6HY57   A0A2P8YMX5   A0A0L8H8N9   A0A2P8ZDE8   A0A437ARD4   J9L1C1   A0A2S2NA29   A0A433SML1   V4ABT9   J9KUE2   W4YFK8   A0A034WBB7   J9M2M3   W4ZD48   V4ACF2   A0A3S1ATS4   J9LHN2   W4XW95   A0A3S1B1A3   A0A336L7N8   J9KVW2   A0A437B6L2   R7USQ6   X1XSS9   J9L4I7   J9KGG7   J9L312   A0A2W1C4W6   J9KF07   A0A0C9R295   J9LMT7   J9LH36   H9JG42   A0A2S2NI51   E0VFD2   A0A2P8XCM6  

Pubmed

29403074    23622113    23254933    25348373    28756777    19121390    + More
20566863   

EMBL

RSAL01000060    RVE49656.1    RSAL01000564    RVE41390.1    RSAL01001641    RVE40743.1    + More
ABLF02022954    ABLF02022960    ABLF02022961    PYGN01000136    PSN53215.1    GEBQ01018880    JAT21097.1    GEBQ01018944    JAT21033.1    GEBQ01008993    JAT30984.1    RQTK01001398    RUS70483.1    GAIX01000046    JAA92514.1    GECU01028084    JAS79622.1    PYGN01000481    PSN45610.1    KQ418840    KOF85631.1    PYGN01000090    PSN54524.1    RSAL01003005    RVE40369.1    ABLF02018763    GGMR01001455    MBY14074.1    RQTK01001418    RUS70401.1    KB201847    ESO94282.1    ABLF02035587    AAGJ04087115    GAKP01007365    JAC51587.1    ABLF02006015    AAGJ04019135    AAGJ04019136    AAGJ04019137    KB200426    ESP01684.1    RQTK01001146    RUS71879.1    ABLF02028754    ABLF02028756    AAGJ04159061    RQTK01001661    RUS69503.1    UFQS01001897    UFQT01001897    SSX12663.1    SSX32106.1    ABLF02008601    RSAL01000150    RVE45765.1    AMQN01021160    AMQN01021161    KB298212    ELU09529.1    ABLF02028749    ABLF02028758    ABLF02028070    ABLF02025292    ABLF02025296    ABLF02011148    KZ150145    PZC72904.1    ABLF02020246    GBYB01006958    GBYB01006962    GBYB01014673    JAG76725.1    JAG76729.1    JAG84440.1    ABLF02010195    ABLF02010196    ABLF02055224    ABLF02023797    BABH01001911    BABH01001912    GGMR01004238    MBY16857.1    DS235111    EEB12088.1    PYGN01003003    PSN29740.1   

Proteomes

UP000283053    UP000007819    UP000265080    UP000245037    UP000271974    UP000053454    + More
UP000030746    UP000007110    UP000014760    UP000005204    UP000009046   

PRIDE

H9JG42   

Pfam

PF05699   Dimer_Tnp_hAT        + More
PF06467   zf-FCS
PF12012   DUF3504
PF01192   RNA_pol_Rpb6

Interpro

IPR037220   BED_dom        + More
IPR008906   HATC_C_dom       
IPR012337   RNaseH-like_sf       
IPR011017   TRASH_dom       
IPR021893   DUF3504       
IPR010507   Znf_MYM       
IPR020708   DNA-dir_RNA_polK_14-18kDa_CS       
IPR036161   RPB6/omega-like_sf       
IPR006110   Pol_omega/K/RPB6       
IPR012293   RNAP_RPB6_omega       

SUPFAM

SSF53098   SSF53098        + More
SSF140996   SSF140996       
SSF63562   SSF63562       

Gene 3D

3.90.940.10    

ProteinModelPortal

A0A437BGT7   A0A437AUA2   A0A3S2N3V9   J9LJB4   A0A3P8TGH4   A0A2P8Z9P6   + More
A0A1B6LBN2   A0A1B6LBF9   A0A1B6M504   A0A3S1AS25   S4PMR1   A0A1B6HY57   A0A2P8YMX5   A0A0L8H8N9   A0A2P8ZDE8   A0A437ARD4   J9L1C1   A0A2S2NA29   A0A433SML1   V4ABT9   J9KUE2   W4YFK8   A0A034WBB7   J9M2M3   W4ZD48   V4ACF2   A0A3S1ATS4   J9LHN2   W4XW95   A0A3S1B1A3   A0A336L7N8   J9KVW2   A0A437B6L2   R7USQ6   X1XSS9   J9L4I7   J9KGG7   J9L312   A0A2W1C4W6   J9KF07   A0A0C9R295   J9LMT7   J9LH36   H9JG42   A0A2S2NI51   E0VFD2   A0A2P8XCM6  

KEGG

101744212    K23368 thyroid receptor-interacting protein 11 | (RefSeq) thyroid receptor-interacting protein 11-li

GO

GO:0046983   GO:0005665   GO:0006383   GO:0005666   GO:0006360   GO:0005736   GO:0006366   GO:0003899   GO:0003677  

Length:

251

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01747

Exp number, first 60 AAs:

0

Total prob of N-in:

0.04508

outside

1  -  251

 

 

Pi

26.664908

Theta

28.400346

Tajima's D

1.073054

CLR

10.134054

CSRT

0.690665466726664

Interpretation

Uncertain