SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08605
Pre Gene Modal
BGIBMGA007617
Annotation
PREDICTED:_nose_resistant_to_fluoxetine_protein_6-like_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 4.852
 

Sequence

CDS
ATGACTCCTTTAGTGTTTTTATTTGTATGTGTAGTTTTAGTTAATAGTGCCGAACTATCGAACGGGAGAGATAACGTCAGAGAAGAGAAGTTGAGAAGCGGCTTAATAGATGCCTTTCAGAATATCAAGAAAGCCTCCGCGAAAGGCGGGATTGATGATGAGAGTCCCCTGACCTCAGACCTCGTGGGGTCTATGATACAAGCCCCGAACACGAGCAGAGACGAGAAATCGACAACCGAAGACTCCTTCGACTTGTTCGCTGATGATGACGGTCTCTCCTTTGCTGTAAACAGCAAAATGGAAGATGAACAGAAGCAGCCCACCACGGAGAAAGCTCACAACGTTCAACATATTGTAAAAACGACAAAACTAGAGAAGACAACTTCGAAACCGAACAAAGACGTCTTCGGTAAATTAAACGACTCGATCAGGAGTGCGGTCAACGAGTCCAGGATGGCTCTGAAGAGGGACGGTTTGAACATGACTCAGTTTACGGGTATTGAGAGTATGCTGAGGGTGTTCGACGCGGAAATCCTCATGAGGCAGTGGAGAGATCTACAAGGTGCGCTCACGGGGGAGTGTAAGAAGGAGATGCAGATGTACGTCGATGGACTTCATGAAAAAAGACTATGGGCTTTGAAGATGGAAGATGCCGGTGGTCGCTACACCTCGATGTTCTACTGGGGGAACAACTACTGGACGGGATCCGCTGAGCTCTGCCAGGTCCTCAACCAACAGCAGGCGACTCCAGCACCTTCTAATAAAAGTTCCAGTTCCCAGATCTTCAGCGAGTGGCGTCAGGATGTGTCCATGACCGGGTCGGGACCGCCTTTCCGGGCAGCTTTCTACACAGTCCGAGTTTCGGTCACCTCAGAACTACCGGAAATTGTCAAAACTCGCCGTACTCTCCACCTTGGTCTCTGTCTCCCGTACTCCTGCTCTGGCGAGGCTGTCTCCGCGTTAGTCGGTAAAGCGAAGGCCCCTCTACTCCAACACTCCGTTCTCGCCGTCCGCACTCCATTCCACGGAGGATACTCTTACATCGAAGATCCTACTTTCCAAACACTTCTCGGCGTCTGCTGTATTCTAGCAGTTGTACTGATAACAGCCACCGTCTACGACGTGAGGATATCTCAAGAGATTGGACGTCGGAAGCAGCGAGCAGCCAATATCGCGACCAACACACCATCCGACCTCAAGCTGGACCTCAACGCGCTTGAAGATATCGCCGTTGCCAACGGTAAATCTATTTACAACGTCAATAACAACATCCCTATCGGCAACTCGTCCAAGGAACAGCTCACGGATACAGCCTCCACCTCCACAGAGGACGAGCTCAAGCTCAGCATATGGTCGAAGCTCTTGCTGTCGTTCTCCATGAGGACGAACATAATTCAGATCTTCGACCAGAGCGTGGGCGCCGACACCGTGCCGGTTGTGCACGGACTCAGAACCCTCTCCATGGTCTGGGTGATATTTGGACACACTTGCATCGTTGTATTCAAGTACGCAGACAACACAGCTTTAAGAGCTATTCTAGAGAAAAGCTTCTGGTTCCAATTGATCATAAGCGCGGTCTATAGCGTTGACACATTCTTCTGTTTGGGTGGAATGCTGGTTACATTTCTGTATTTCCGATCGAACGCTAAAGGCAAGTTGGATCGGCTGACGAAGGGCAGACGGAACTTCGCCTCGGGAGCGCTGCAGTTCTTAGGACTTCTTGGCTACAGATTTGCCAGGCTCACGGCCCCCTACCTGTTTGTCCTGGGCGTGGTGGAGGTCACCATGAAATGGTTCGCACACAACGCTGTCTTCGAACCCCCTGCGATGGATTACGAGACCTGCCCCAAGTACTGGTGGAGGAATCTGCTCTACATCAACACTTTGTTCCCGGTCGAGCAGATGTGCATGTTGTGGAGTTGGTATCTATCGGACGACACCCAGTTCTACGCTGTCAGCGCCATCCTTCTCATCTTATCGACGAGTCATTTCAAACTGTCAGCGTCGTTAACTGGCGTATTTTTCGTGTCGTCCCTGGTGACCACGGGCTACGTGTCCTGGAGCAACGACCACATCCCGAACAGCGAGGATCCCTTCACACAGTTCGACAAGATCTACGACAAGCCCTGGACTAGACTTGGCCCCTATTTGGTCGGCATGCTCACCGGTTGGATCCTCTTCAAGACTAACTTGAAGATTCGAATGAGCAGGATATGGGCGTGGGTTGGGTGGTTGATATGCGCCGCTACGTTTTTGTTCCTGATCTTTGGGCTCTACAACACAGAGCTGAGCGTGGCGTCAGCTGCGGTGTACAGCGCGCTCTCCCACTCTCTGTGGGCTGCCTGCGTGGGCTGGGTCATCATTGCATGCTCCACTGGACATGGAGGCTGGGTGCGGCCGCTGCTGGCGTCGCCCGTGCTGTACCCGTTCTCGCGCGTGACGTACTGCGCCTACCTCGTGCACCCCGTCGTGCTGCGCTACGTCGCGATGCACCTCACGCACCCCATCCACCTGGGAGAGCTGCTCGTGTTCGTCCTTTTCCTGGGACTAACGGTCATCTCATACTTCCTGGCGTTCCTGGTCTCTGTAGCCTTCGAAGCTCCCATCGTCATGATGCTTAAACTCTTATCGCCACAGAAGAAGTCTCACTGA
Protein
MTPLVFLFVCVVLVNSAELSNGRDNVREEKLRSGLIDAFQNIKKASAKGGIDDESPLTSDLVGSMIQAPNTSRDEKSTTEDSFDLFADDDGLSFAVNSKMEDEQKQPTTEKAHNVQHIVKTTKLEKTTSKPNKDVFGKLNDSIRSAVNESRMALKRDGLNMTQFTGIESMLRVFDAEILMRQWRDLQGALTGECKKEMQMYVDGLHEKRLWALKMEDAGGRYTSMFYWGNNYWTGSAELCQVLNQQQATPAPSNKSSSSQIFSEWRQDVSMTGSGPPFRAAFYTVRVSVTSELPEIVKTRRTLHLGLCLPYSCSGEAVSALVGKAKAPLLQHSVLAVRTPFHGGYSYIEDPTFQTLLGVCCILAVVLITATVYDVRISQEIGRRKQRAANIATNTPSDLKLDLNALEDIAVANGKSIYNVNNNIPIGNSSKEQLTDTASTSTEDELKLSIWSKLLLSFSMRTNIIQIFDQSVGADTVPVVHGLRTLSMVWVIFGHTCIVVFKYADNTALRAILEKSFWFQLIISAVYSVDTFFCLGGMLVTFLYFRSNAKGKLDRLTKGRRNFASGALQFLGLLGYRFARLTAPYLFVLGVVEVTMKWFAHNAVFEPPAMDYETCPKYWWRNLLYINTLFPVEQMCMLWSWYLSDDTQFYAVSAILLILSTSHFKLSASLTGVFFVSSLVTTGYVSWSNDHIPNSEDPFTQFDKIYDKPWTRLGPYLVGMLTGWILFKTNLKIRMSRIWAWVGWLICAATFLFLIFGLYNTELSVASAAVYSALSHSLWAACVGWVIIACSTGHGGWVRPLLASPVLYPFSRVTYCAYLVHPVVLRYVAMHLTHPIHLGELLVFVLFLGLTVISYFLAFLVSVAFEAPIVMMLKLLSPQKKSH

Summary

EMBL
BABH01003309    NWSH01002297    PCG68610.1    KQ459596    KPI95342.1    AGBW02010064    + More
OWR49275.1    KQ459717    KPJ20289.1    NNAY01002149    OXU21931.1    AXCN02001522    GL446605    EFN87520.1    APCN01000876    KQ971361    EFA05306.2    GEHC01001350    JAV46295.1    QOIP01000001    RLU27557.1    AAAB01008987    EAA01818.5    KK107154    EZA56840.1    GL768069    EFZ12494.1    ADTU01023412    ADTU01023413    ADTU01023414    KQ976419    KYM89271.1    KQ414654    KOC66024.1    GAMC01012972    JAB93583.1    GDHF01016867    JAI35447.1    KQ980824    KYN12521.1    KQ982021    KYN30584.1    KQ976885    KYN07512.1    CH476200    EDY71464.1    KQ982335    KYQ57544.1    GBXI01016037    JAC98254.1    CH477432    EAT41009.1    NEVH01011893    PNF31216.1    JRES01000557    KNC30260.1    GEDC01001793    JAS35505.1    AXCM01012822    CH964291    EDW86385.1    KQ434923    KZC11495.1    GEBQ01017372    JAT22605.1    CVRI01000063    CRL04481.1    KZ288256    PBC30608.1    ADMH02001137    ETN63969.1    UFQS01000320    UFQT01000320    SSX02841.1    SSX23209.1    LBMM01004227    KMQ92679.1    GAKP01019754    GAKP01019753    JAC39198.1    SSX02842.1    SSX23210.1    CCAG010010824    KQ435712    KOX79362.1    GL888199    EGI65295.1    ABLF02036237    GL441034    EFN65166.1    GFXV01000502    MBW12307.1    KQ760132    OAD61806.1    JXJN01000809    GBHO01026096    JAG17508.1    GFXV01006695    MBW18500.1    ABLF02038822    GGMR01000701    MBY13320.1    KK107539    QOIP01000006    EZA49101.1    RLU21565.1   
Pfam
PF01757   Acyl_transf_3
Interpro
IPR002656   Acyl_transf_3        + More
IPR006621   Nose-resist-to-fluoxetine_N       

Ontologies

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.989726
 
 
Length:
883
Number of predicted TMHs:
11
Exp number of AAs in TMHs:
232.0798
Exp number, first 60 AAs:
0.12728
Total prob of N-in:
0.00443
outside
1  -  354
TMhelix
355  -  377
inside
378  -  485
TMhelix
486  -  508
outside
509  -  522
TMhelix
523  -  545
inside
546  -  565
TMhelix
566  -  588
outside
589  -  636
TMhelix
637  -  659
inside
660  -  665
TMhelix
666  -  688
outside
689  -  709
TMhelix
710  -  727
inside
728  -  738
TMhelix
739  -  761
outside
762  -  775
TMhelix
776  -  798
inside
799  -  810
TMhelix
811  -  833
outside
834  -  842
TMhelix
843  -  865
inside
866  -  883
 
 

Population Genetic Test Statistics

Pi
228.176086
Theta
152.748581
Tajima's D
0.194274
CLR
0.45764
CSRT
0.420428978551072
Interpretation
Uncertain
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