Gene

KWMTBOMO08602

Pre Gene Modal

BGIBMGA007616

Annotation

PREDICTED:_ADP-ribosylation_factor-like_protein_16_[Bombyx_mori]

Location

Bomo_Chr15(+):823393-825813      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.688 Mitochondrial   Reliability : 1.372

CDS

ATGAACGAGCCAGATAAGAAAATTAGTGTACTGTGCTTAGGCCCAAAAGGCTCAGGAAAGACTACGCTAATGAAAAAACTAGAACACGCTGAAGGTATAGACTACACATACAGTCCTGTTCCGACGATAGGAACGAATATTTACGACATTCATTATCTAAATAAAAATGGAAAAAAACAAATGTTGTCAGTTCGCGAAGTGGGCGGAGAGATGGCGCCATTATGGAATAACTATTTAGATGGAGTTGAAAAAATTATTTACGTGGTGGACACGTCTAATCTGTGTCAAATTTCTGAAGCTACTGTGCTGTTGTACAAGCTTTTAGCTGAACCACGTCTCAAAAATACGAAGTTCATTCTAGTTCTAAGTAAAATGGATGCTGCTTATCGCCAAATGCGCAACGAGGCTCTACTGATGTTGCAATACACAAGACTCTGCAAGGAACTGCCCAATTCAATCACGCTACTGGAAGCCTCTCCACTAACCGGCGAAGGCATTGACAAACTAATAGAACTATTGGGTGCTCAGAAACCGAACTTAAAGTTTAAGGGACAAGTAAAAAATAACATATAA

Protein

MNEPDKKISVLCLGPKGSGKTTLMKKLEHAEGIDYTYSPVPTIGTNIYDIHYLNKNGKKQMLSVREVGGEMAPLWNNYLDGVEKIIYVVDTSNLCQISEATVLLYKLLAEPRLKNTKFILVLSKMDAAYRQMRNEALLMLQYTRLCKELPNSITLLEASPLTGEGIDKLIELLGAQKPNLKFKGQVKNNI

Uniprot

A0A2A4JB41   A0A212F5C3   A0A3S2M0N9   A0A194PQV0   A0A0N1IH71   A0A1W4X4I4   + More
A0A067QMC7   A0A0L7KPY2   A0A336LX93   A0A151JRP2   A0A1B6JSF8   A0A1B6MLB4   D6WQG0   A0A1J1HX85   A0A151X0G0   A0A195C3U3   A0A182NLA9   A0A195EXJ4   A0A195BKY7   A0A158NJ60   F4W765   A0A182MV05   A0A182XI07   A0A182UP03   A0A182LF30   A0A182HSY8   A0A084WRC7   A0A182R365   A0A182VXE4   A0A182PAF3   A0A182TKM2   Q7QC65   A0A182J2G3   A0A182QK89   A0A1B0GMR5   A0A0J7L5P6   U4UDB8   A0A3L8DRR3   A0A1B6FG25   A0A1B6GQR8   E2A410   A0A232F680   B4G8A0   Q29N43   K7IUN4   E2BJY0   B0WMZ6   A0A1B0CL06   T1H0S9   A0A3B0JBH6   B4MV92   B4P2E4   B3N7Q4   Q9VPP8   A0A088A0G2   B4Q640   Q17I90   A0A1I8Q851   B4ICX0   A0A1B0BVE8   B3MUH6   A0A1A9ZYL6   A0A0M8ZT28   A0A1W4V300   A0A1I8MLU3   A0A182XWW2   A0A182JRI8   E0VJ25   A0A1A9V053   A0A1B0FIQ9   A0A0L7R1J6   A0A154PH85   A0A1A9W6Z7   A0A0L0CAS6   B4JDP5   B4LTL4   A0A026WCP6   B4KFI7   A0A034WWQ5   A0A0K8UFJ0   A0A2P8YXE7   A0A182GIX2   A0A0K8W4K3   A0A0M4E434   A0A087TRZ3   A0A226DBS4   A0A1D2MGU8   A0A443RYK4   X1Z7B0  

Pubmed

22118469    26354079    24845553    26227816    18362917    19820115    + More
21347285    21719571    20966253    24438588    12364791    14747013    17210077    23537049    30249741    20798317    28648823    17994087    15632085    20075255    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    22936249    17510324    25315136    25244985    20566863    26108605    24508170    25348373    29403074    26483478    27289101    23254933   

EMBL

NWSH01002297    PCG68613.1    AGBW02010203    OWR48941.1    RSAL01000083    RVE48456.1    + More
KQ459596    KPI95338.1    KQ459717    KPJ20294.1    KK853153    KDR10582.1    JTDY01007519    KOB65145.1    UFQT01000275    SSX22666.1    KQ978579    KYN30012.1    GECU01012202    GECU01005548    GECU01005082    GECU01002422    JAS95504.1    JAT02159.1    JAT02625.1    JAT05285.1    GEBQ01003294    JAT36683.1    KQ971354    EFA06078.1    CVRI01000034    CRK92637.1    KQ982612    KYQ53860.1    KQ978317    KYM95280.1    KQ981920    KYN33005.1    KQ976453    KYM85434.1    ADTU01017499    GL887813    EGI69949.1    AXCM01000492    APCN01000376    ATLV01026020    KE525405    KFB52771.1    AAAB01008859    EAA07947.1    AXCN02000116    AJVK01026430    LBMM01000453    KMQ98302.1    KB632272    ERL91052.1    QOIP01000005    RLU23091.1    GECZ01020649    JAS49120.1    GECZ01004991    JAS64778.1    GL436519    EFN71862.1    NNAY01000904    OXU26000.1    CH479180    EDW28580.1    CH379060    EAL33500.2    AAZX01002644    GL448708    EFN83989.1    DS232004    EDS31398.1    AJWK01016822    CAQQ02124990    OUUW01000004    SPP79704.1    CH963857    EDW76437.1    CM000157    EDW87140.1    CH954177    EDV57230.1    AE014134    BT124848    AAF51497.1    ADF97849.1    CM000361    CM002910    EDX03224.1    KMY87312.1    CH477241    EAT46407.1    CH480829    EDW45396.1    JXJN01021259    CH902624    EDV33505.1    KQ435863    KOX70387.1    DS235219    EEB13381.1    CCAG010020437    KQ414667    KOC64713.1    KQ434905    KZC11203.1    JRES01000673    KNC29352.1    CH916368    EDW03415.1    CH940649    EDW64987.1    KK107293    EZA53446.1    CH933807    EDW13102.1    GAKP01000190    JAC58762.1    GDHF01027199    JAI25115.1    PYGN01000302    PSN48914.1    JXUM01012648    KQ560358    KXJ82851.1    GDHF01026966    GDHF01006283    JAI25348.1    JAI46031.1    CP012523    ALC38521.1    KK116484    KFM67882.1    LNIX01000025    OXA42659.1    LJIJ01001292    ODM92230.1    NCKV01019030    RWS20238.1    AMQN01000185   

Proteomes

UP000218220    UP000007151    UP000283053    UP000053268    UP000053240    UP000192223    + More
UP000027135    UP000037510    UP000078492    UP000007266    UP000183832    UP000075809    UP000078542    UP000075884    UP000078541    UP000078540    UP000005205    UP000007755    UP000075883    UP000076407    UP000075903    UP000075882    UP000075840    UP000030765    UP000075900    UP000075920    UP000075885    UP000075902    UP000007062    UP000075880    UP000075886    UP000092462    UP000036403    UP000030742    UP000279307    UP000000311    UP000215335    UP000008744    UP000001819    UP000002358    UP000008237    UP000002320    UP000092461    UP000015102    UP000268350    UP000007798    UP000002282    UP000008711    UP000000803    UP000005203    UP000000304    UP000008820    UP000095300    UP000001292    UP000092460    UP000007801    UP000092445    UP000053105    UP000192221    UP000095301    UP000076408    UP000075881    UP000009046    UP000078200    UP000092444    UP000053825    UP000076502    UP000091820    UP000037069    UP000001070    UP000008792    UP000053097    UP000009192    UP000245037    UP000069940    UP000249989    UP000092553    UP000054359    UP000198287    UP000094527    UP000288716   

PRIDE

Q9VPP8   

Pfam

PF00025   Arf        + More
PF00096   zf-C2H2
PF07776   zf-AD
PF03178   CPSF_A

Interpro

IPR027417   P-loop_NTPase        + More
IPR006689   Small_GTPase_ARF/SAR       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
IPR012934   Znf_AD       
IPR004871   Cleavage/polyA-sp_fac_asu_C       
IPR031297   DDB1       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR011047   Quinoprotein_ADH-like_supfam       

SUPFAM

SSF52540   SSF52540        + More
SSF57667   SSF57667       
SSF50998   SSF50998       

Gene 3D

2.130.10.10    

ProteinModelPortal

A0A2A4JB41   A0A212F5C3   A0A3S2M0N9   A0A194PQV0   A0A0N1IH71   A0A1W4X4I4   + More
A0A067QMC7   A0A0L7KPY2   A0A336LX93   A0A151JRP2   A0A1B6JSF8   A0A1B6MLB4   D6WQG0   A0A1J1HX85   A0A151X0G0   A0A195C3U3   A0A182NLA9   A0A195EXJ4   A0A195BKY7   A0A158NJ60   F4W765   A0A182MV05   A0A182XI07   A0A182UP03   A0A182LF30   A0A182HSY8   A0A084WRC7   A0A182R365   A0A182VXE4   A0A182PAF3   A0A182TKM2   Q7QC65   A0A182J2G3   A0A182QK89   A0A1B0GMR5   A0A0J7L5P6   U4UDB8   A0A3L8DRR3   A0A1B6FG25   A0A1B6GQR8   E2A410   A0A232F680   B4G8A0   Q29N43   K7IUN4   E2BJY0   B0WMZ6   A0A1B0CL06   T1H0S9   A0A3B0JBH6   B4MV92   B4P2E4   B3N7Q4   Q9VPP8   A0A088A0G2   B4Q640   Q17I90   A0A1I8Q851   B4ICX0   A0A1B0BVE8   B3MUH6   A0A1A9ZYL6   A0A0M8ZT28   A0A1W4V300   A0A1I8MLU3   A0A182XWW2   A0A182JRI8   E0VJ25   A0A1A9V053   A0A1B0FIQ9   A0A0L7R1J6   A0A154PH85   A0A1A9W6Z7   A0A0L0CAS6   B4JDP5   B4LTL4   A0A026WCP6   B4KFI7   A0A034WWQ5   A0A0K8UFJ0   A0A2P8YXE7   A0A182GIX2   A0A0K8W4K3   A0A0M4E434   A0A087TRZ3   A0A226DBS4   A0A1D2MGU8   A0A443RYK4   X1Z7B0  

PDB

2K5U     E-value=1.74256e-12,     Score=171

KEGG

101744948    no KO assigned | (RefSeq) ADP-ribosylation factor-like protein 16

GO

GO:0005525   GO:0003676   GO:0008270   GO:0005634   GO:0016874   GO:0006281   GO:0005622   GO:0007264   GO:0009451   GO:0009982   GO:0016620   GO:0006418   GO:0016876   GO:0043039  

PANTHER

PTHR10644:SF3  

Length:

190

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0377200000000001

Exp number, first 60 AAs:

0.02668

Total prob of N-in:

0.17874

outside

1  -  190

 

 

Pi

15.395122

Theta

40.366045

Tajima's D

-1.869064

CLR

437.969863

CSRT

0.0224988750562472

Interpretation

Possibly Positive selection