SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08599
Annotation
PREDICTED:_U7_snRNA-associated_Sm-like_protein_LSm11?_partial_[Plutella_xylostella]
Location in the cell
Nuclear   Reliability : 4.321
 

Sequence

CDS
ATGTCCGAAAGACATAATTCGGAGTCTTCAACATCTGAAACTGAGATGACTACTGGCAGCTCTACAAATTTAAAGTCAAAAAAAGTGTTACATTCTAACAAAAAAACAGTTTTAACTGAAAATGAGCACCGTACAAAGAAACAGTATTCTGAAGGTAAAGAAATTAAAAGTTTTGACAGTAAAATTAACGTGGAACCGCATAGAGCAAGAGATTCAGAAGAAGAAATTTCTGAGACTGATGATAAAAACTCAGATATGTCAACGACTGAATCAGAAGTTAGTGCCTGCAGTTCCAACTTCAACCCAATAAAGGCATTGTATTCCAAAAAGAGTAAAATACCAGTGGAAGATGCACCAGTATTTGAGAATCTAGAACAGTTAATGTCTTCGTTCAAGAACGATTCAGTATTACCCGTTGGGTATGGAAGTATTGTTAAAGAGAGGGAAGAAAAAAAACTCAAGCTAAAACTGGAAGAAGAAAAACTGTTGGAAGAGAAAAATCGAGCACGTTTTGCACAGTACAGAGATTTGATGCCGACCAAAAAAATAAGACGAAAGAAAAACGTGTTGACTAAAATGGAAAATGTCAAAGGTCCGTTGGGCGCCTTGAAAGAATGCGTCGATGGAAGACTCAGGATAAAGAATCGTATTAAAATAAATACTTCAAGATCTATTATCACGGAAAACAGAGATAGTTCGCGCACCAAACACATCAGAAATAGTGGAGAAGTGGCAAGGAACTCTTTTCAAGTCACATTCGAAAGAGTATTTATGGTGCAGCCAAGAAACTCGAAACAAGAGGCTAAAAGAGTATTTATGGTGCAGCCAAGAAACTCGAAACAAGAGGCTAAAAGAGTATTTATGGTGCAGCCAAGAAACTCGAAACAAGAGGCTAAAAGAGTATTTATGGTGCAGCCAAGAAACTCGAAACAAGAGGCTAAAAGAGTATTTATGGTGCAGCCAAGAAACTCGAAACAAGAGGCTAAAAGAGTATTTATGGTGCAGCCAAGAAACTCGAAACAAGAGGCTAAAGTCTCTGTAGACTGGAAAGCAGGATTGTTTTGTTGA
Protein
MSERHNSESSTSETEMTTGSSTNLKSKKVLHSNKKTVLTENEHRTKKQYSEGKEIKSFDSKINVEPHRARDSEEEISETDDKNSDMSTTESEVSACSSNFNPIKALYSKKSKIPVEDAPVFENLEQLMSSFKNDSVLPVGYGSIVKEREEKKLKLKLEEEKLLEEKNRARFAQYRDLMPTKKIRRKKNVLTKMENVKGPLGALKECVDGRLRIKNRIKINTSRSIITENRDSSRTKHIRNSGEVARNSFQVTFERVFMVQPRNSKQEAKRVFMVQPRNSKQEAKRVFMVQPRNSKQEAKRVFMVQPRNSKQEAKRVFMVQPRNSKQEAKRVFMVQPRNSKQEAKVSVDWKAGLFC

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
355
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01994
outside
1  -  355
 
 

Population Genetic Test Statistics

Pi
197.552446
Theta
175.418273
Tajima's D
-1.432805
CLR
2394.214381
CSRT
0.0728963551822409
Interpretation
Uncertain
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