Silkworm Genome Informatics Database

Gene

KWMTBOMO08597

Pre Gene Modal

BGIBMGA007970

Annotation

PREDICTED:_DNA-binding_protein_D-ETS-3_isoform_X2_[Amyelois_transitella]

Location

Bomo_Chr15(-):546345-613777 View in EpiBrowser

Transcription factor

ETS

Location in the cell

Nuclear Reliability : 3.787

CDS

ATGATGGCAGTGGAGACGCGCCCGGCCAGTGCTGGACCGGAGCCGCGCCGCTCGCCGGCACCGGACCGCCGGCCGCTCAGTGCCGAAGAGCCCCGCACTCTCGCCGCCAGGAAGGCCTACCCTGAAGATCCCAGATCCCCGAAACCAGACGTGAGCGATGAGGCGCCCCTGGACTTGACCGTTCGAAAAGAGATATCGGTTTGTGATTTCGCGAGACGCTCGTTCGCCGACCCGAGTGACTACGTGAGGACTCAGCTCATCCTGAGGCAGTCCCAGGAGTTCCTGGCGACCGCCAGAGACTCCGGCACAGACTCCGACGACTCCGCCGGCCGACTTAGTCCCGCTGACGAAGCCCTCACCGGAAAAGCCTATAAGAAATCCCTCATGAAGAGATACATGAATGGAGAACCAACAGGACTGGCCCTCGGAGCCAGAGCGCTGCTGCACGGTCTCCTGGCGCCCTCACCCTCGGTCAGGCACCATCCCCTGTACACGGCGCCCAACACAGGCTCCCTCCCACCTTCGCCAGCGGACAGTGGGGTATCGGACGTGGAGTCGTCCTCGTCCGGAGCAGGATCCGCTGAGGACCTGAAGACGAGGCTTCAACCTCCCCCGCCGGCGCCCTTCCACGCCCCCTTCCTGCCCTTCTACCAGCATCATCAGATCGCTTCCACATTGCAGCACGCCGCTGCACATCCTCGACCACCAGTGGGAGCGTTGAGCGATCGTGACGCATATGGATATGGTTACGGCGGCGGGGGAGGCGGGACTCACCACTTCGCAGCGCCTGCGCCCCCGCCGCTGCCGCACGACGAGCTGCCATACTCCGTATTCGACTTCGGCGACTACCAGCGCCACCATCATCACAACAAACTGAAGCCGAAGAAAAGGCCTCGCTCCGATGCACCTCCCACGCCGGGCGTCAAGCGCAAGAGCCGGGAGGGCTCCACCACGTACCTGTGGGAGTTCCTGCTGAAGCTGCTGCAGGACCGCGAGTACTGCCCGCGCTTCATCAAGTGGACGAACCGCGAGAAGGGCGTGTTCAAGCTGGTCGACTCGAAGGCGGTGTCGCGACTCTGGGGCCTGCACAAGAACAAGCCAGACATGAACTACGAGACCATGGGCCGCGCCCTGCGCTATTACTACCAGCGCGGGATCCTCGCTAAGGTGGACGGCCAGCGCCTCGTCTACCAGTTCGTGGACGTGCCCAAGGACATCGTCGAGATCGACTGTTCGTTGGCGTAG

Protein

MMAVETRPASAGPEPRRSPAPDRRPLSAEEPRTLAARKAYPEDPRSPKPDVSDEAPLDLTVRKEISVCDFARRSFADPSDYVRTQLILRQSQEFLATARDSGTDSDDSAGRLSPADEALTGKAYKKSLMKRYMNGEPTGLALGARALLHGLLAPSPSVRHHPLYTAPNTGSLPPSPADSGVSDVESSSSGAGSAEDLKTRLQPPPPAPFHAPFLPFYQHHQIASTLQHAAAHPRPPVGALSDRDAYGYGYGGGGGGTHHFAAPAPPPLPHDELPYSVFDFGDYQRHHHHNKLKPKKRPRSDAPPTPGVKRKSREGSTTYLWEFLLKLLQDREYCPRFIKWTNREKGVFKLVDSKAVSRLWGLHKNKPDMNYETMGRALRYYYQRGILAKVDGQRLVYQFVDVPKDIVEIDCSLA

Similarity

Belongs to the ETS family.

Uniprot

A0A1J0R3Q8 A0A2A4JV46 Q7Z0X0 A0A1B6LV14 A0A1B6JZ47

Pubmed

27855280 12781684

EMBL

KX881578 APD72148.1 NWSH01000517 PCG75907.1 AY170860 AAO41697.1 + More
GEBQ01012454 JAT27523.1 GECU01003503 JAT04204.1

Proteomes

UP000218220

Pfam

PF00178 Ets

Interpro

IPR000418   Ets_dom        + More
IPR036388   WH-like_DNA-bd_sf
IPR036390   WH_DNA-bd_sf

SUPFAM

SSF46785 SSF46785

Gene 3D

1.10.10.10

ProteinModelPortal

A0A1J0R3Q8 A0A2A4JV46 Q7Z0X0 A0A1B6LV14 A0A1B6JZ47

PDB

1DUX E-value=2.42036e-22, Score=261

KEGG

693011 K09428 E74-like factor 1/2/4 | (RefSeq) E74, E74B; transcription factor E74

GO

GO:0043565 GO:0005634 GO:0003700 GO:0006355 GO:0009451 GO:0009982 GO:0016620 GO:0006418 GO:0003676 GO:0016876 GO:0043039

Subcellular location

Nucleus

Length:

414

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02319

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00919

outside

1 - 414

Pi

240.44697

Theta

183.156096

Tajima's D

0.624141

CLR

0.704496

CSRT

0.550722463876806

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics