Gene

KWMTBOMO08594

Pre Gene Modal

BGIBMGA007972

Annotation

PREDICTED:_nudC_domain-containing_protein_1_[Amyelois_transitella]

Location

Bomo_Chr15(-):530154-532517      View in EpiBrowser

Full name

NudC domain-containing protein 1      

Location in the cell

Cytoplasmic   Reliability : 1.011 Nuclear   Reliability : 1.467

CDS

ATGTCATCTTCCCTCGTAGAATTACGACCAAACAGACGTCTACTGGAATTAGACTTCGAAGGATACAAATTAAACTTACAAGCCCTACCCCACTATAGCTTAGAGCTAGCTTCTCCCGTGGATAAAGTTTATCCCGACGATGTCCAGTACTCTTTCGTTCACGCAAAACTTTTTGCACTACATAACCATCTAGTCCTTGATTATTGGGATTATTCGTTCAACTATTATTACATTGACAAAAACCAGCAAGTAAGACATGTTACCTTTGAAAATATAAATCACACATTCCAAAATAATATTGTTTATGATATCCCAGCCCACATTGAAAGGAAACCAGGTCATTTCAACCCTTCACTGACATTTCCTGCAAGTAATTTAGCAGTAGTCAGTGATGGTACAGGAATGTTACACATAGTCGACACAGGACCAAGAAATAGGTCTGCTGGTAGGAATCAACTCTGGCATACCCTACAATCCAGCTTAATACTCGGAGAGAACAAGTACTTTGTTATTGTTGATGCACGAATACAAGAGAAGAAAAATACTGAAACTTTGCATTGCTTACTTCAATCAGTTCAACAAAATGAAAAACATTTTGAGTCTGTTCTTACTTGGGTGTCCTTTGATAATGATGGAGAGTCTTGGAAGCAGATGAGTTTCAGACAAGTACAAGGAAAGGGTATAGTGCACTATGCCGCCATAGAAACCAGCTGCAGTGCTTTGTATGTTGCATCGGACAATATCTTTAAATTTACCATGGATTCTGAAACAGAGATTACTCAGAAAAATCAAAGGATGGAATCGAGAAAAATTATTTACACATGGCTTCAGACATCAGAGGATGTAACAGTCACGTTAAAATTAGAAGAAAAATACAATAAGAAACATTTCCATGTGTTAGTTTCACCAATTACCATCAAAGTGAGTTATGCTGGAAAGACATTTGTGGAGGGAAAACTAAAGCACAACGTGGACAGTAATTTGACTACATGGAATGTTCAGGAAGATGGTAAAGTTGATATTCTAATTACAAAATCTGATAGTATGTTATGGGATGAATTAATTGAAGGAGGGGATCCCAATGGTGAACAGATAGTAGACGCAAATTTAGTAGAAGAAGCACACCAAAGACTAGCACATTTATGTTCTGAAACAGAAGCTACCAGTGAACAGTCAGTGCCAGGGTTCTCAACACAAGAACTAGAAGAGTGTGATGCTGCTTCTGAAGAAGACACTGTGTTAGTAAGGCTTGATGCTACTAATCATGAAATCACACATCGGATACCATTAAGTGTTCACCAATACCTCTTCAGTGTAAGATTGGAAACTCAAGAAGTCCCAGCATTAGCCTTAAGACAAGATGTAGATGCTTGCATATGGCAACCATACTCTTTACTAGTAAACACAGAAACCTGGCCTGTGACCCATCAAGGGACATTATCTGCATTTGGTTATGTTCAGTCTTCAAAACAAAATAGAAAATTTGTTACATGTCCTCCTAACTTCTCATACAGTGTTGTATGTGAATCTGAGAGACATATATTCATTTATCGAAGTACTGGTAACCAAGATTCACAACTGAGAAAACGTACAGGAGGAATGATGAAAGCCATAAAAGTGGGACAACAAAATTTATTCAACATTGACAAATATGGAGAAGTTTTAGGAATTAATGCTACAAATGAGTATTTATTTATATTGACAGAGAAAACATTAGTGGCTATTGAAGTGCAATAA

Protein

MSSSLVELRPNRRLLELDFEGYKLNLQALPHYSLELASPVDKVYPDDVQYSFVHAKLFALHNHLVLDYWDYSFNYYYIDKNQQVRHVTFENINHTFQNNIVYDIPAHIERKPGHFNPSLTFPASNLAVVSDGTGMLHIVDTGPRNRSAGRNQLWHTLQSSLILGENKYFVIVDARIQEKKNTETLHCLLQSVQQNEKHFESVLTWVSFDNDGESWKQMSFRQVQGKGIVHYAAIETSCSALYVASDNIFKFTMDSETEITQKNQRMESRKIIYTWLQTSEDVTVTLKLEEKYNKKHFHVLVSPITIKVSYAGKTFVEGKLKHNVDSNLTTWNVQEDGKVDILITKSDSMLWDELIEGGDPNGEQIVDANLVEEAHQRLAHLCSETEATSEQSVPGFSTQELEECDAASEEDTVLVRLDATNHEITHRIPLSVHQYLFSVRLETQEVPALALRQDVDACIWQPYSLLVNTETWPVTHQGTLSAFGYVQSSKQNRKFVTCPPNFSYSVVCESERHIFIYRSTGNQDSQLRKRTGGMMKAIKVGQQNLFNIDKYGEVLGINATNEYLFILTEKTLVAIEVQ

Keywords

Complete proteome   Cytoplasm   Nucleus   Phosphoprotein   Reference proteome  

Feature

chain  NudC domain-containing protein 1

Uniprot

H9JEM5   A0A2A4JWX4   A0A2H1V1D2   A0A0N1IK23   A0A194PRE7   A0A0L7LRA1   + More
A0A212F5F0   A0A3S2PDR2   A0A2J7Q796   D6WDT8   A0A2P8XMS7   A0A1B6DFJ9   A0A1B6G0J7   N6T633   W5M5F7   A0A0L8FUX6   A0A0A9Z2F1   A0A146LE40   A0A0T6B8H9   A0A0P4VZP9   A0A444UJQ3   V4ACM1   A0A2G8JSB0   A0A1S3H5X3   A0A1J1HWC5   R7U695   A0A452GBN4   W5PYE5   A0A0P5TNJ1   A0A1Q3F6L6   A0A3L8T0V4   A0A131XKK4   A0A1D5PBW1   F7BGF0   A0A131YH68   A0A3Q7URY1   A0A384BZA2   A0A224YDB9   E9H0U8   A0A3Q2HHF9   B0XIU7   A0A250YJW4   L7MA31   A0A0P6GPZ6   E2R0P2   A0A0P5X0F9   A0A3Q7T2R4   U6CQZ2   G1SMA7   A0A2Y9H1Z4   H0ZPS9   L5KB64   D2HA60   S7PMH2   A0A2U3YM19   W4Z8P0   G1M2L2   A0A226EX87   A0A3Q7P995   L5MGU1   E1BLF7   A0A1U7T9U4   A0A2U3W6S0   A0A091F9G5   L8IH58   A0A151MXY3   M3Y3D5   A0A0Q3X9U0   A0A218VD54   A0A2K5CL38   A0A2K5S1Z5   M3WPX7   A0A2Y9JA84   A0A0P5WTN9   A0A093GM42   I3L7Z3   B5DFD1   H0WUD1   A0A2K6T0M8   T1I144   A0A2Y9DAG0   A0A2Y9QQU8   A0A341AYD9   U3DVM1   F7F163   A0A2Y9PAF1   G1PMX5   H2QWK9   H2PR14   A0A2Y9F3Y7   A0A226MHU8   A0A210QJC2   K6ZWU7   A0A1V4KH86   A0A0P4YVH7   A0A091EIE6   Q6PIP5  

Pubmed

19121390    26354079    26227816    22118469    18362917    19820115    + More
29403074    23537049    25401762    26823975    27129103    23254933    29023486    20809919    30282656    28049606    15592404    17495919    26830274    24813606    28797301    21292972    19892987    28087693    25576852    16341006    21993624    20360741    23258410    20010809    19393038    22751099    22293439    17975172    30723633    15489334    15632090    25243066    15057822    16136131    28812685    14688378    16141072    21183079   

EMBL

BABH01003324    NWSH01000517    PCG75910.1    ODYU01000192    SOQ34566.1    KQ459717    + More
KPJ20303.1    KQ459596    KPI95324.1    JTDY01000260    KOB78023.1    AGBW02010203    OWR48954.1    RSAL01000083    RVE48450.1    NEVH01017447    PNF24454.1    KQ971323    EEZ99920.1    PYGN01001703    PSN33308.1    GEDC01014776    GEDC01012882    JAS22522.1    JAS24416.1    GECZ01013801    JAS55968.1    APGK01050958    KB741180    ENN73113.1    AHAT01012190    AHAT01012191    KQ426252    KOF68501.1    GBHO01004148    GBHO01004147    GBRD01010354    GBRD01010353    JAG39456.1    JAG39457.1    JAG55470.1    GDHC01012141    JAQ06488.1    LJIG01009149    KRT83658.1    GDKW01000535    JAI56060.1    SCEB01214425    RXM35416.1    KB202284    ESO91066.1    MRZV01001337    PIK38609.1    CVRI01000021    CRK91660.1    AMQN01010370    KB307653    ELT98675.1    LWLT01000011    AMGL01112243    AMGL01112244    AMGL01112245    AMGL01112246    AMGL01112247    GDIP01141449    JAL62265.1    GFDL01011876    JAV23169.1    QUSF01000001    RLW13268.1    GEFH01001911    JAP66670.1    AADN05000663    GEDV01010682    JAP77875.1    GFPF01004551    MAA15697.1    GL732582    EFX74637.1    DS233381    EDS29688.1    GFFW01000853    JAV43935.1    GACK01005021    JAA60013.1    GDIQ01030279    JAN64458.1    AAEX03008736    GDIP01140300    GDIP01079438    LRGB01001764    JAM24277.1    KZS10608.1    HAAF01001239    CCP73065.1    AAGW02012833    AAGW02012834    ABQF01006041    KB030886    ELK08602.1    GL192620    EFB25667.1    KE162759    EPQ09497.1    AAGJ04047954    ACTA01169329    LNIX01000001    OXA62202.1    KB100320    ELK37591.1    KK719751    KFO65881.1    JH881252    ELR55508.1    AKHW03004704    KYO29308.1    AEYP01077037    AEYP01077038    AEYP01077039    LMAW01000115    KQL60589.1    MUZQ01000006    OWK64024.1    AANG04003518    GDIP01081838    JAM21877.1    KL216808    KFV71340.1    AEMK02000022    DQIR01029547    DQIR01244513    DQIR01271991    DQIR01273933    DQIR01279073    DQIR01300610    DQIR01322844    HCZ85022.1    HDB99990.1    BC169014    CH473950    AAI69014.1    EDM16313.1    AAQR03010647    AAQR03010648    AAQR03010649    ACPB03016551    GAMT01007312    GAMS01009321    GAMR01009960    GAMQ01000661    GAMP01007027    JAB04549.1    JAB13815.1    JAB23972.1    JAB41190.1    JAB45728.1    AABR07057673    AAPE02009392    AACZ04067622    GABF01010228    GABE01003845    JAA11917.1    JAA40894.1    ABGA01223981    ABGA01223982    ABGA01223983    ABGA01223984    ABGA01223985    NDHI03003373    PNJ76497.1    MCFN01000863    OXB54768.1    NEDP02003383    OWF48809.1    GABC01001702    JAA09636.1    LSYS01003169    OPJ83775.1    GDIP01221648    JAJ01754.1    KN121850    KFO35226.1    AF521132    AK077673    AK167855    AK168122    BC031583    AAH31583.1    AAQ08822.1    BAC36947.1    BAE39873.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000037510    UP000007151    + More
UP000283053    UP000235965    UP000007266    UP000245037    UP000019118    UP000018468    UP000053454    UP000030746    UP000230750    UP000085678    UP000183832    UP000014760    UP000291000    UP000002356    UP000276834    UP000000539    UP000002280    UP000286642    UP000261680    UP000291021    UP000000305    UP000002281    UP000002320    UP000002254    UP000076858    UP000286640    UP000001811    UP000248481    UP000007754    UP000010552    UP000245341    UP000007110    UP000008912    UP000198287    UP000286641    UP000009136    UP000189704    UP000245340    UP000052976    UP000050525    UP000000715    UP000051836    UP000197619    UP000233020    UP000233040    UP000011712    UP000248482    UP000053875    UP000008227    UP000005225    UP000233220    UP000015103    UP000248480    UP000252040    UP000008225    UP000002494    UP000248483    UP000001074    UP000002277    UP000001595    UP000248484    UP000198323    UP000242188    UP000190648    UP000028990    UP000000589   

PRIDE

H9JEM5    I3L7Z3    F7F163    Q6PIP5   

Pfam

PF04969   CS

Interpro

IPR007052   CS_dom        + More
IPR037895   NUDCD1       
IPR008978   HSP20-like_chaperone       
IPR002048   EF_hand_dom       

SUPFAM

SSF49764   SSF49764       

Gene 3D

2.60.40.790    

ProteinModelPortal

H9JEM5   A0A2A4JWX4   A0A2H1V1D2   A0A0N1IK23   A0A194PRE7   A0A0L7LRA1   + More
A0A212F5F0   A0A3S2PDR2   A0A2J7Q796   D6WDT8   A0A2P8XMS7   A0A1B6DFJ9   A0A1B6G0J7   N6T633   W5M5F7   A0A0L8FUX6   A0A0A9Z2F1   A0A146LE40   A0A0T6B8H9   A0A0P4VZP9   A0A444UJQ3   V4ACM1   A0A2G8JSB0   A0A1S3H5X3   A0A1J1HWC5   R7U695   A0A452GBN4   W5PYE5   A0A0P5TNJ1   A0A1Q3F6L6   A0A3L8T0V4   A0A131XKK4   A0A1D5PBW1   F7BGF0   A0A131YH68   A0A3Q7URY1   A0A384BZA2   A0A224YDB9   E9H0U8   A0A3Q2HHF9   B0XIU7   A0A250YJW4   L7MA31   A0A0P6GPZ6   E2R0P2   A0A0P5X0F9   A0A3Q7T2R4   U6CQZ2   G1SMA7   A0A2Y9H1Z4   H0ZPS9   L5KB64   D2HA60   S7PMH2   A0A2U3YM19   W4Z8P0   G1M2L2   A0A226EX87   A0A3Q7P995   L5MGU1   E1BLF7   A0A1U7T9U4   A0A2U3W6S0   A0A091F9G5   L8IH58   A0A151MXY3   M3Y3D5   A0A0Q3X9U0   A0A218VD54   A0A2K5CL38   A0A2K5S1Z5   M3WPX7   A0A2Y9JA84   A0A0P5WTN9   A0A093GM42   I3L7Z3   B5DFD1   H0WUD1   A0A2K6T0M8   T1I144   A0A2Y9DAG0   A0A2Y9QQU8   A0A341AYD9   U3DVM1   F7F163   A0A2Y9PAF1   G1PMX5   H2QWK9   H2PR14   A0A2Y9F3Y7   A0A226MHU8   A0A210QJC2   K6ZWU7   A0A1V4KH86   A0A0P4YVH7   A0A091EIE6   Q6PIP5  

PDB

2O30     E-value=0.00611814,     Score=95

KEGG

101739833    no KO assigned | (RefSeq) nudC domain-containing protein 1

GO

GO:0005509   GO:0005829   GO:0005654  

PANTHER

PTHR21664  

Subcellular location

Cytoplasm  
Nucleus  

Length:

578

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01456

Exp number, first 60 AAs:

0.00026

Total prob of N-in:

0.00068

outside

1  -  578

 

 

Pi

22.746687

Theta

19.186273

Tajima's D

-1.037886

CLR

0.779922

CSRT

0.133543322833858

Interpretation

Uncertain