Gene

KWMTBOMO08592  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007973

Annotation

PREDICTED:_PAXIP1-associated_glutamate-rich_protein_1_[Papilio_machaon]

Location

Bomo_Chr15(-):525636-526287      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.586

CDS

ATGGAAACCGAGATTCAAGGAGACGATTGGGATATCCCTTGTTCAGATGACGAACTGGCGAAAAACGGCGTTTTTATTGGAAAAAGCTGGATGCCGGAACCGGCCGAATTAGAGGAACTTTACAAAAACATCGACAAAAAGGGTATATTAAACCTAGAATGGAAATGTCCAGGACGCAGGCAACCATCTCCCGTGCCTGTCAGCAAGGAAAACCAGCCTGAGTTACCTCAATCGCCAATCCGGGAAGAAAAGTCAGACTTTGATTTCATGGATGAGGTTAGTTCATTGCGGCTGCGGGTAAGACGGGAAGGGGAAGACACGTTGAGAGGTTCTGCTAAGAAAAAGACAACTTCTTTTGATGGTATTCTTTCGAATATGATAAGGCATAAAAGAATAGAGCAGATGGAAAAACAAGCGAAAACATCACCCTCAACTACTTCAAGTAACTAA

Protein

METEIQGDDWDIPCSDDELAKNGVFIGKSWMPEPAELEELYKNIDKKGILNLEWKCPGRRQPSPVPVSKENQPELPQSPIREEKSDFDFMDEVSSLRLRVRREGEDTLRGSAKKKTTSFDGILSNMIRHKRIEQMEKQAKTSPSTTSSN

Uniprot

H9JEM6   A0A437BDM4   A0A0N1ID16   A0A0L7LRJ6   A0A2A4JWZ3   A0A194PPT1   + More
A0A2H1V2R8   A0A212F5E3   S4PLW9   A0A2J7Q2P9   A0A347ZJ88   A0A2P8Z332   A0A0M9A1L9   E2A3W1   A0A0J7KI48   A0A310SM60   A0A2A3ENN0   A0A087ZP49   A0A067QS70   A0A026WU19   A0A0L7RAA3   A0A232EFV1   E2BYL1   A0A1W4XHX3   A0A154PTT5   A0A195EM04   E9IWW1   A0A195ETN8   A0A1Y1MJ53   A0A158NPP9   A0A151X8N8   A0A195ATQ2   A0A1B6KC38   U4UJR3   A0A1B6CU17   A0A0T6B2A4   N6TVU7   A0A0C9R6G3   A0A2R7WC67   A0A1B6JE64   J9JKX9   A0A023F0Z4   A0A1B6F256   T1HZA4   A0A0V0GES7   A0A069DVX6   A0A453YJV2   A0A182UXS1   A0A182UB88   A0A182KWR7   A0A182XKC8   Q7Q9A7   A0A182XWM4   A0A182KGS9   A0A182Q6R5   A0A182MNT5   A0A182RDA1   A0A146M054   A0A0A9W8J3   A0A182VY93   A0A084VUZ0   A0A182JBX9   T1INR3   A0A182NSS0   E9HWW2   A0A0P6AB26   A0A0P5ZJF4   W5JDJ4   A0A0P5FXA7   A0A182F7W0   A0A2M3ZKA5   A0A146L2X0   A0A0P4VQN8   A0A224XP48   A0A087USF6   A0A1Q3FBS0   A0A2L2YF13   A0A0P4W9H3   A0A0P6IUJ7   Q16P10   A0A1L8DAG7   A0A0P5CHT3   A0A170VV25   A0A182PX16   T1E7R8   B0X6A1   A0A1W7R524   A0A1L8DB72   A0A1L8DB16   A0A1B0DGQ5   V5HF87   B7P813   U5EN78  

Pubmed

19121390    26354079    26227816    22118469    23622113    29403074    + More
20798317    24845553    24508170    30249741    28648823    21282665    28004739    21347285    23537049    25474469    26334808    20966253    12364791    14747013    17210077    25244985    26823975    25401762    24438588    21292972    20920257    23761445    27129103    26561354    26999592    17510324    25765539   

EMBL

BABH01003324    RSAL01000083    RVE48448.1    KQ459717    KPJ20305.1    JTDY01000260    + More
KOB78024.1    NWSH01000517    PCG75912.1    KQ459596    KPI95322.1    ODYU01000192    SOQ34564.1    AGBW02010203    OWR48956.1    GAIX01003820    JAA88740.1    NEVH01019092    PNF22854.1    FX985656    BBA84394.1    PYGN01000219    PSN50912.1    KQ435784    KOX74546.1    GL436510    EFN71885.1    LBMM01007243    KMQ89914.1    KQ761343    OAD57865.1    KZ288204    PBC33327.1    KK853090    KDR11568.1    KK107105    QOIP01000011    EZA59522.1    RLU16636.1    KQ414619    KOC67774.1    NNAY01004934    OXU17214.1    GL451493    EFN79216.1    KQ435090    KZC14610.1    KQ978730    KYN28952.1    GL766616    EFZ14895.1    KQ981986    KYN31244.1    GEZM01032339    JAV84660.1    ADTU01022705    KQ982409    KYQ56680.1    KQ976745    KYM75432.1    GEBQ01030960    JAT09017.1    KB632353    ERL93327.1    GEDC01026558    GEDC01023744    GEDC01023477    GEDC01020575    GEDC01016525    GEDC01015083    GEDC01014917    JAS10740.1    JAS13554.1    JAS13821.1    JAS16723.1    JAS20773.1    JAS22215.1    JAS22381.1    LJIG01016150    KRT81465.1    APGK01050089    KB741165    ENN73420.1    GBYB01002351    GBYB01002352    JAG72118.1    JAG72119.1    KK854557    PTY16831.1    GECU01010287    JAS97419.1    ABLF02019206    GBBI01003769    JAC14943.1    GECZ01025484    JAS44285.1    ACPB03014184    GECL01000317    JAP05807.1    GBGD01003435    JAC85454.1    APCN01002180    AAAB01008904    EAA09607.1    AXCN02000227    AXCM01018426    GDHC01006639    JAQ11990.1    GBHO01042460    GBHO01042459    GBHO01042458    GBHO01042456    GBHO01042455    GBRD01007660    GDHC01001307    JAG01144.1    JAG01145.1    JAG01146.1    JAG01148.1    JAG01149.1    JAG58161.1    JAQ17322.1    ATLV01017129    KE525156    KFB41784.1    JH431198    GL732966    EFX63770.1    GDIP01032148    JAM71567.1    GDIP01043105    JAM60610.1    ADMH02001528    ETN62171.1    GDIQ01256194    JAJ95530.1    GGFM01008171    MBW28922.1    GDHC01016973    JAQ01656.1    GDKW01003122    JAI53473.1    GFTR01002170    JAW14256.1    KK121351    KFM80295.1    GFDL01010086    JAV24959.1    IAAA01026187    IAAA01026188    LAA06709.1    GDRN01062374    JAI65081.1    GDUN01000485    JAN95434.1    CH477800    EAT36091.1    GFDF01010662    JAV03422.1    GDIP01171206    JAJ52196.1    GEMB01006372    JAR96966.1    GAMD01002817    JAA98773.1    DS232407    EDS41251.1    GEHC01001386    JAV46259.1    GFDF01010376    JAV03708.1    GFDF01010421    JAV03663.1    AJVK01033811    GANP01002173    JAB82295.1    ABJB010133960    DS654682    EEC02735.1    GANO01004227    JAB55644.1   

Proteomes

UP000005204    UP000283053    UP000053240    UP000037510    UP000218220    UP000053268    + More
UP000007151    UP000235965    UP000245037    UP000053105    UP000000311    UP000036403    UP000242457    UP000005203    UP000027135    UP000053097    UP000279307    UP000053825    UP000215335    UP000008237    UP000192223    UP000076502    UP000078492    UP000078541    UP000005205    UP000075809    UP000078540    UP000030742    UP000019118    UP000007819    UP000015103    UP000075840    UP000075903    UP000075902    UP000075882    UP000076407    UP000007062    UP000076408    UP000075881    UP000075886    UP000075883    UP000075900    UP000075920    UP000030765    UP000075880    UP000075884    UP000000305    UP000000673    UP000069272    UP000054359    UP000008820    UP000075885    UP000002320    UP000092462    UP000001555   

PRIDE

H9JEM6   

Pfam

PF15364   PAXIP1_C

Interpro

IPR028213   PA1       

ProteinModelPortal

H9JEM6   A0A437BDM4   A0A0N1ID16   A0A0L7LRJ6   A0A2A4JWZ3   A0A194PPT1   + More
A0A2H1V2R8   A0A212F5E3   S4PLW9   A0A2J7Q2P9   A0A347ZJ88   A0A2P8Z332   A0A0M9A1L9   E2A3W1   A0A0J7KI48   A0A310SM60   A0A2A3ENN0   A0A087ZP49   A0A067QS70   A0A026WU19   A0A0L7RAA3   A0A232EFV1   E2BYL1   A0A1W4XHX3   A0A154PTT5   A0A195EM04   E9IWW1   A0A195ETN8   A0A1Y1MJ53   A0A158NPP9   A0A151X8N8   A0A195ATQ2   A0A1B6KC38   U4UJR3   A0A1B6CU17   A0A0T6B2A4   N6TVU7   A0A0C9R6G3   A0A2R7WC67   A0A1B6JE64   J9JKX9   A0A023F0Z4   A0A1B6F256   T1HZA4   A0A0V0GES7   A0A069DVX6   A0A453YJV2   A0A182UXS1   A0A182UB88   A0A182KWR7   A0A182XKC8   Q7Q9A7   A0A182XWM4   A0A182KGS9   A0A182Q6R5   A0A182MNT5   A0A182RDA1   A0A146M054   A0A0A9W8J3   A0A182VY93   A0A084VUZ0   A0A182JBX9   T1INR3   A0A182NSS0   E9HWW2   A0A0P6AB26   A0A0P5ZJF4   W5JDJ4   A0A0P5FXA7   A0A182F7W0   A0A2M3ZKA5   A0A146L2X0   A0A0P4VQN8   A0A224XP48   A0A087USF6   A0A1Q3FBS0   A0A2L2YF13   A0A0P4W9H3   A0A0P6IUJ7   Q16P10   A0A1L8DAG7   A0A0P5CHT3   A0A170VV25   A0A182PX16   T1E7R8   B0X6A1   A0A1W7R524   A0A1L8DB72   A0A1L8DB16   A0A1B0DGQ5   V5HF87   B7P813   U5EN78  

KEGG

101739971    K14973 PAXIP1-associated protein 1 | (RefSeq) PAXIP1-associated glutamate-rich protein 1

GO

GO:0044666   GO:0051568   GO:0033148   GO:1902808   GO:0030331   GO:0016021  

PANTHER

PTHR28467  

Length:

149

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.17199

outside

1  -  149

 

 

Pi

149.739494

Theta

144.808268

Tajima's D

0.160911

CLR

0.01613

CSRT

0.415329233538323

Interpretation

Uncertain