SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08590
Pre Gene Modal
BGIBMGA007975
Annotation
PREDICTED:_uncharacterized_protein_LOC101745243_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.656
 

Sequence

CDS
ATGTGCGCCAACGCCAGCACCGGAGTCTTGGAGCCGGCGCTGCTCAGGGTCTCCGTCAGAAAAGAGTGCAAAGGAGGCAGATCGTATCAGAAGCTGGGCTTCTGCGATTTGAACTTGGCGGAGCTGGCGGGCGCCGGGGAGACGACGAGACGGTGCCTGCTCGAGGGCTACGACAACAGGACGAGGCAGGACAACTCGGTGCTCAGGCTGAGGATCAAAATGAACATGATCTCGGGCGATCCCTTGTTTAAAGTGCCGGAAAGGAAGCAGGAGGTGGCGGACAGTAAGGGCGGCGGCGATAGCGGGTCGGAGAGCGCGGCGGGCGGCGCCCCGGACGACGACTGCGCCTCCTCCACCGCCAGCTCGGGCTTCGGCTCGCTCACCAAGAAGAAGAATTTTGACGGTGGAGTCTCACAGTCCCTGACCCTGGTACCCTCGTGTGAACTCCCCACGCCGGACTCCGACGAGTCACCTCTTGCCACCTCCATACCTGACCATCCTGCCTTAACGATAAGCGCGTGCACGACGGTACCGGCGCCGTCCTCCTGCGCCTCCTGCCTCCAGCACCAGCACACGCACTCCAGGAACTCGTCCAACACCTCGGGGGACATGAGCAGCAAGGCGTCAGGGTACGGCAGCTCGTCGGCCGCCTCCGCGCACTCGCGGCAGAGCTCCGAGGGGGACTCCGCGGGGGACGCCAGGCCGCACCACAACAGTATTCGGTTAGAGCGCACAACCACTACCACAACCACCCTGTACGTCCCCTCCCAGACTTGCAAGCACACGGGCAGGGCGCTCTCCAAGCTCTTGCTCGAGAAGACCGTCATCAGCGAGACGTCGGACGTGTTCCTGACCCCCAACACGACCCTCACCGGCCCTCCCGATGTGATCCCCCGCCTCGCCTTGCAGTCCCCCTCCAGCGAGGAGTACAAGACTCCGGACTCGACTCTCATAGAGAACGGACATGAAAACTCGTTCGCGATGCCGACCTACTTCGACAAGAAGAGGAAGGTGGCCGCGACCATCATCAGTGCCGCTGTCGAACCTCTCACCAACTTCCAGATCTTCAAACAGAAATCTCTGAACACGATCCCGGCGCTGCTCGAGAAGAATAAGAAAAACGAGGAGCTATTCAACAATTTCCCGTTCCTTACCCCCCTGGCGCACAGGAAGAACTCGCTCGTGTCCAACGCGAACCGACTGTCCGGCTGCATAGAGGACGAGTTCTACTGCATACCCTCCGATCCGGAGGCGGACCCCGGCTCCGACAAAGTGGACATCAGAAACAAGTTCAGAAGTCTCTCAAACCACGCCCTCAACGAAGAGGTGTTGACTTCCACGCCCAAAGCAGACGTGGTGGACGGAGTGATGCACTGCCAGAGGATGCCGTCCCTGCGACACAGCTACACCGGCGCCCTGAGGAACCCGTCGTCGGCGTCCGAGGGCGGGTCTCTGGAGCGCGGAGGCGCCGCCCTAGAGCGACGCAAGCGGGCCGCCGCGCTGCTCGCCATGGCGCCGCCCGCCACCGACGACTCGCAGCACGTGGCCTCGTGTCGCGTCGAGAACACTCGCGTGAACCCGGACTCCCTGATCGACGAGCTGCTCGCCGCCACCGACTTCCGAGGGGACCACGACGACGCCGCAGAGACGTCGGGCCTGCAGCTGTTCATCGCGCGCGACGGCACCGCCGAGCTGGGCACCCGCCAACGCCAGCAGCAGCGCGCGCACTACCAGCGCGTCGTGCTGCAGCCCGCGGACCACAGGTAG
Protein
MCANASTGVLEPALLRVSVRKECKGGRSYQKLGFCDLNLAELAGAGETTRRCLLEGYDNRTRQDNSVLRLRIKMNMISGDPLFKVPERKQEVADSKGGGDSGSESAAGGAPDDDCASSTASSGFGSLTKKKNFDGGVSQSLTLVPSCELPTPDSDESPLATSIPDHPALTISACTTVPAPSSCASCLQHQHTHSRNSSNTSGDMSSKASGYGSSSAASAHSRQSSEGDSAGDARPHHNSIRLERTTTTTTTLYVPSQTCKHTGRALSKLLLEKTVISETSDVFLTPNTTLTGPPDVIPRLALQSPSSEEYKTPDSTLIENGHENSFAMPTYFDKKRKVAATIISAAVEPLTNFQIFKQKSLNTIPALLEKNKKNEELFNNFPFLTPLAHRKNSLVSNANRLSGCIEDEFYCIPSDPEADPGSDKVDIRNKFRSLSNHALNEEVLTSTPKADVVDGVMHCQRMPSLRHSYTGALRNPSSASEGGSLERGGAALERRKRAAALLAMAPPATDDSQHVASCRVENTRVNPDSLIDELLAATDFRGDHDDAAETSGLQLFIARDGTAELGTRQRQQQRAHYQRVVLQPADHR

Summary

Pfam
PF10358   NT-C2
Interpro
IPR019448   NT-C2        + More
IPR039931   FAM102-like       

Ontologies

GO

Topology

Length:
588
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00412
Exp number, first 60 AAs:
0.00018
Total prob of N-in:
0.00089
outside
1  -  588
 
 

Population Genetic Test Statistics

Pi
258.189032
Theta
170.95655
Tajima's D
1.287336
CLR
0.402917
CSRT
0.736863156842158
Interpretation
Uncertain
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