Gene

KWMTBOMO08587

Pre Gene Modal

BGIBMGA007607

Annotation

PREDICTED:_protein_crumbs_[Bombyx_mori]

Location

Bomo_Chr15(+):369628-401301      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 3.52

CDS

ATGACGGTGGGAGTTTGGAGTCGACACGGCGCTGCGAGCCTGGCAGGCTGCTTCATATTCCTGACGTATACGCTGGCGACAACTCCTGGTAGCTTCGCAGCGGCGCCCGTCGGACCTTCCGATCGACCAGAGGCCTACTTCAACGGCAGCTCTTATATCAGACTATCCAGGCCCATTTCCTTGAAGCAACTTGTTGGACTTAGTTTTAGAACTTGTGTTGGAGGGGAGCTATTTTCACAAAGGTTCGAAGGTTACACGTTACACGTGACCGCATTGTATGAACAAGTGGTCGTGTCCTGGGCAAGACCCGCGCAGCCTCACAGGGAGGTGGGCCTGGTGAAGGAGACGCTGGACAACAGGTGGCATTGGGTCGCCCTCCGCTACAAACCGAACCCACCGTCCTTATTGCTCGAAGTAGACCGAGACACGCAGGTGATTTCGAACGTGACATGGAACCCTGAGCTGCTGTCGCCTGGTGCGCTAGAGGCGGGTGGGGCCGTCGTGTTGGTTGGCAATGTGTTCAGCGGCTGCATCCACGAAGGACCTCAGCTCGAGTTCCACGCGGCCGGAGCACAACTCAGGAATGTTGTGTTCGGAAACTGCCCATTGACCACAGACGAATGTATCGACAGGAAGGACGTACTGAGGATACCGCCGAAGGACCACTGCTACAACGAGCCCTGCATGAGACACGGCACTTGTATATCTAGACATGACAGGTACGAGTGCCACTGCACAGCGCGCTACACGGGCAACAACTGCGAGGTGGACGCCGGCGACCCCTGCGCGTCGGCCGCGTGCCGCCACGGCGCGCGCTGCGTGGAGGACGGCCGCGGCGACTACAGCTGCGACTGCCCTCCTGGCTACCACGGTACATACTGCGAGCTGGAAGTGTCCCTGGACCCGCTGTGCGTGGCCGGCCCGTGCCGAAACAACGGCAGCTGCAGCGTGCCCCCCGGCGGCGACACCTACCTCTGCACCTGTCCGCCAGGATACACGGGTCGTAACTGCGAGACGGACGTGGACGAGTGCTCGGGCGCCGCGGCCTGCCTTAACGGGGGCCGCTGCGTCGACGCCGTCAACAACTACACCTGCGACTGCACCGCCACAGGGTACACGGGCGCCCGCTGCGAGACCAACGTGAACGAGTGCGAGGAGGACCGCGCGCTGTGCGGGCACGGCGTGTGCTACGACACGTACGGCGGGTTCGTGTGCGCGTGCCAGCCCGGCTACACCGGGGAGCACTGCCACAGGATGTCGGCGTGTGCGTCAGGACCGTGCGGAGCGGGAGGGGCATGCGTGGAGGAGGGGGGAGGGTTCCGGTGCGTGTGCGCGCGCGGCTACCTCCCGCCCCTGTGTGCTGCCCCCGCGCCCCCCTCGCCTTGCGCCGACCTCGCCTGTCCCCCGCGGTCACACTGCTCAGCTGCAGGATCATCGACCACGGGGACTGGGGGTGCGGGCTCCCCCGGCGCGGTCCCCGGTGCCGTGGTCGCCGGGGGTGCGGTCCCCGGAGGCGCGGTCCCCCGGCCAGCCGTATGCATCTGCGACGTCGGATACTACGGAGCGGCGGGCCTGTCCCCGAACTGTTCCCGGGCGGAGTCAGCGTGCGAGGCGGGCGTGTGCCTCAACGGCGCGTCGTGCGAGCAGGGCCCCGACCACTTCAACTGCTCGTGCGCGCCCGGGTACCGAGGTCCGTACTGCGAGATGGGGGGCAGGGCGGCGCCCGACCCGCAGCCCGAGCGCTGCGCGGCCGGCCCCTGTCTGCACGCCCTCAGCTGCGTGGACCTGGTCGTGAGTGTGCCCCCTACTGTTCCCTTGCTGCCCTCTGCCTACCCCCTTGTTGCTTGA

Protein

MTVGVWSRHGAASLAGCFIFLTYTLATTPGSFAAAPVGPSDRPEAYFNGSSYIRLSRPISLKQLVGLSFRTCVGGELFSQRFEGYTLHVTALYEQVVVSWARPAQPHREVGLVKETLDNRWHWVALRYKPNPPSLLLEVDRDTQVISNVTWNPELLSPGALEAGGAVVLVGNVFSGCIHEGPQLEFHAAGAQLRNVVFGNCPLTTDECIDRKDVLRIPPKDHCYNEPCMRHGTCISRHDRYECHCTARYTGNNCEVDAGDPCASAACRHGARCVEDGRGDYSCDCPPGYHGTYCELEVSLDPLCVAGPCRNNGSCSVPPGGDTYLCTCPPGYTGRNCETDVDECSGAAACLNGGRCVDAVNNYTCDCTATGYTGARCETNVNECEEDRALCGHGVCYDTYGGFVCACQPGYTGEHCHRMSACASGPCGAGGACVEEGGGFRCVCARGYLPPLCAAPAPPSPCADLACPPRSHCSAAGSSTTGTGGAGSPGAVPGAVVAGGAVPGGAVPRPAVCICDVGYYGAAGLSPNCSRAESACEAGVCLNGASCEQGPDHFNCSCAPGYRGPYCEMGGRAAPDPQPERCAAGPCLHALSCVDLVVSVPPTVPLLPSAYPLVA

Uniprot

H9JDL0   A0A2A4JEP0   A0A2H1VAE0   A0A194PRD7   A0A212F5E7   A0A3S2NIG9   + More
A0A1A9WF45   A0A0K8W7U4   W8B0P3   W8BAF0   A0A0M4EQJ0   B4PVW8   A0A0R1E5W6   A0A0R1EB75   A0A0R1E5W7   B4JFW9   A0A0R1E5V5   A0A0R1E5V3   A0A0R1E659   A0A0Q9X185   A0A1I8NC73   A0A0Q9XCQ3   A0A0Q9XBA0   B4K9V3   A0A0Q9X0I4   A0A1I8NC74   A0A0Q9X2E5   A0A0Q9WER6   B4LXN1   A0A0Q9WED9   A0A0L0C7F2   A0A3B0KB18   I5AP72   A0A0R3NLU9   A0A0R3NIE8   Q297B9   A0A0R3NI27   B4GEC0   A0A0R3NI42   A0A0P9A9A4   B3N1N1   A0A0P8XJ30   A0A0P8XZB6   A0A0N8NZP4   A0A0P8ZJC6  

Pubmed

19121390    26354079    22118469    24495485    17994087    17550304    + More
25315136    26108605    15632085   

EMBL

BABH01003337    BABH01003338    NWSH01001686    PCG70421.1    ODYU01001507    SOQ37809.1    + More
KQ459596    KPI95314.1    AGBW02010203    OWR48962.1    RSAL01000083    RVE48439.1    GDHF01005195    JAI47119.1    GAMC01019744    JAB86811.1    GAMC01019746    JAB86809.1    CP012526    ALC47276.1    CM000160    EDW98967.2    KRK04571.1    KRK04570.1    KRK04568.1    CH916369    EDV92508.1    KRK04573.1    KRK04572.1    KRK04569.1    CH933806    KRG01637.1    KRG01640.1    KRG01639.1    EDW15601.1    KRG01638.1    KRG01641.1    CH940650    KRF82938.1    EDW66815.1    KRF82936.1    JRES01000819    KNC28171.1    OUUW01000007    SPP83299.1    CM000070    EIM52757.1    KRT00623.1    KRT00620.1    EAL28287.3    KRT00622.1    CH479182    EDW33955.1    KRT00619.1    CH902661    KPU74891.1    EDV34000.1    KPU74890.1    KPU74889.1    KPU74892.1    KPU74888.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000007151    UP000283053    UP000091820    + More
UP000092553    UP000002282    UP000001070    UP000009192    UP000095301    UP000008792    UP000037069    UP000268350    UP000001819    UP000008744    UP000007801   

PRIDE

H9JDL0   

Pfam

PF12661   hEGF        + More
PF07645   EGF_CA
PF00008   EGF
PF00054   Laminin_G_1
PF02210   Laminin_G_2

Interpro

IPR000152   EGF-type_Asp/Asn_hydroxyl_site        + More
IPR000742   EGF-like_dom       
IPR013032   EGF-like_CS       
IPR018097   EGF_Ca-bd_CS       
IPR009030   Growth_fac_rcpt_cys_sf       
IPR013320   ConA-like_dom_sf       
IPR001881   EGF-like_Ca-bd_dom       
IPR001791   Laminin_G       
IPR008297   Notch       

SUPFAM

SSF49899   SSF49899        + More
SSF57184   SSF57184       

ProteinModelPortal

H9JDL0   A0A2A4JEP0   A0A2H1VAE0   A0A194PRD7   A0A212F5E7   A0A3S2NIG9   + More
A0A1A9WF45   A0A0K8W7U4   W8B0P3   W8BAF0   A0A0M4EQJ0   B4PVW8   A0A0R1E5W6   A0A0R1EB75   A0A0R1E5W7   B4JFW9   A0A0R1E5V5   A0A0R1E5V3   A0A0R1E659   A0A0Q9X185   A0A1I8NC73   A0A0Q9XCQ3   A0A0Q9XBA0   B4K9V3   A0A0Q9X0I4   A0A1I8NC74   A0A0Q9X2E5   A0A0Q9WER6   B4LXN1   A0A0Q9WED9   A0A0L0C7F2   A0A3B0KB18   I5AP72   A0A0R3NLU9   A0A0R3NIE8   Q297B9   A0A0R3NI27   B4GEC0   A0A0R3NI42   A0A0P9A9A4   B3N1N1   A0A0P8XJ30   A0A0P8XZB6   A0A0N8NZP4   A0A0P8ZJC6  

PDB

4XBM     E-value=2.89517e-28,     Score=314

KEGG

101745387    K16681 protein crumbs | (RefSeq) protein crumbs

GO

GO:0005509   GO:0016021   GO:0007219   GO:0050793   GO:0030154   GO:0005515   GO:0004252   GO:0006508   GO:0016491   GO:0016620   GO:0006418   GO:0003676   GO:0016876   GO:0043039  

SignalP

Position:   1 - 33,         Likelihood:  0.730871

 

 

Length:

615

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

19.6379099999999

Exp number, first 60 AAs:

19.62184

Total prob of N-in:

0.87602

POSSIBLE N-term signal

sequence

inside

1  -  12

TMhelix

13  -  35

outside

36  -  615

 

 

Pi

234.024968

Theta

177.578952

Tajima's D

1.250588

CLR

0.162756

CSRT

0.730313484325784

Interpretation

Uncertain