Silkworm Genome Informatics Database

Gene

KWMTBOMO08585

Pre Gene Modal

BGIBMGA007978

Annotation

PREDICTED:_U11/U12_small_nuclear_ribonucleoprotein_35_kDa_protein-like_[Bombyx_mori]

Location

Bomo_Chr15(-):356524-359107 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.493 Nuclear Reliability : 2.026

CDS

ATGACCAAGGACGGCGAAACAGATTTTAAAAAATATGCCACAGAATACGATCCAATAAAAATTGGTTCTATTGATGGTACAGACGTAGAGCCTCATGATCGAGCAATATTACGTGCTATTTACTCTGAATACATCCCCAATAAAAGGGTAAAGGGAAACCCAAATCATACCATCTTTATAGGGAGACTTAACCCTAGGACACCACAGGAAACTATCGAATCGGAATTTTCAAAATTCGATAAAATCATTCACTGTCGTCTCGTAAGGGATCTTGTCACAGGAAAATCGAAGCAGTATGCTTTTGTAGAATATGAAAAGTACAGTTGTATGGAAAAGGCACTAAGAGAGATGCACTTAGAATACATAGATGGTTCAGAGATAATTGTAGAGCGGGAAGCTGAACGACGACTTCCTGGATGGAAGCCTCGACGCTTAGGCGGTGGGTTTGGTGGCCGCAAAGAATCAGGACAGTTAAGGTTCGGCTGTAGAGATAGACCTTTCCGGAAACCATACACTGAAACAAAATTGAGTCTGATGGCTAAATCCACACCTGATACAATATCAGATATTTTAGGAAAGGACAAAAAATTTGATGGAGAATATGCAGAAGATTCTTTTAATAATCATGTCTTGGCTTTAGTAAAATTTAAACCTCCGAAAGACATAATTTTTGGCTGCATACTCACTATAATCTCAGAATTTTGGACAATAACTGCTGCCAGTTGTATAGATGCAATTGAAGAACTGGATTCCCTGGACTCTTTTGTGATGTTGGAAGACTATGGGCTGGAGAAGAAAGGTGAAAGTTTCACTATGCTTGGATTTGGTCCATTAAGGACAATTGATAAAAGTCTATCAGGTCACAGACTGCACAAAGCATATGTGTACAATCTCTCAACCCGTCAGTGCCGCAGTACAGATGACACATGGTCACTCCGCCATCTGCAGAGCGGCTCGGCCTTGTTGCAGGGTGGATGTGGACGGTCAGCGCTGTGTGCAGGGGTCTTATGGAGTAGAAATGCACCCTGCAACTACTGTGCGGGGACACCGCTGCTGTCCGAATCCTTGCTCCTTGGCGTCATGAGCGACAATCAGCAGTGTGGCGTCTCCTGCGACCCTCAGATTTACGTCAATATAGCCATGCTTAGGGATTGGATCGATTTTATTATTGGAAATAAATGA

Protein

MTKDGETDFKKYATEYDPIKIGSIDGTDVEPHDRAILRAIYSEYIPNKRVKGNPNHTIFIGRLNPRTPQETIESEFSKFDKIIHCRLVRDLVTGKSKQYAFVEYEKYSCMEKALREMHLEYIDGSEIIVEREAERRLPGWKPRRLGGGFGGRKESGQLRFGCRDRPFRKPYTETKLSLMAKSTPDTISDILGKDKKFDGEYAEDSFNNHVLALVKFKPPKDIIFGCILTIISEFWTITAASCIDAIEELDSLDSFVMLEDYGLEKKGESFTMLGFGPLRTIDKSLSGHRLHKAYVYNLSTRQCRSTDDTWSLRHLQSGSALLQGGCGRSALCAGVLWSRNAPCNYCAGTPLLSESLLLGVMSDNQQCGVSCDPQIYVNIAMLRDWIDFIIGNK

Uniprot

NA

ProteinModelPortal

NA

PDB

5ITH E-value=1.05245e-07, Score=134

KEGG

105842008 K13155 U11/U12 small nuclear ribonucleoprotein 35 kDa protein | (RefSeq) U11/U12 small nuclear ribon

GO

GO:0003676 GO:0000166 GO:0004252 GO:0006508 GO:0016491 GO:0016620 GO:0006418 GO:0016876 GO:0043039

Length:

393

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.306360000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03091

outside

1 - 393

Pi

226.418908

Theta

179.626653

Tajima's D

0.656915

CLR

19.540456

CSRT

0.556822158892055

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics