Gene

KWMTBOMO08582  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007603

Annotation

PREDICTED:_cytochrome_b5-like_isoform_X2_[Amyelois_transitella]

Location

Bomo_Chr15(+):298088-315232      View in EpiBrowser

Full name

Cytochrome b5      

Location in the cell

Cytoplasmic   Reliability : 1.628 Extracellular   Reliability : 1.447

CDS

ATGGAAGGTGAAATGAAATTGTTCACGCGCGAAGAACTGAAGTCCCGGTCTACGCGTGCTGACGCCGTACTAATTATCCACAACGAAGTCTACGACGTCACAAAATTCCTCCTCGAGCACCCTGGCGGTGAAGAGGTACTTCTGGAGAAAGCAGGTCAAGATGCTTCCGAGCCGTTTGAGGACGTGAGCCACAGTTCTGATGCCAGATCGTTGATGAAGAAGTACAAGATCGGGGAGTTGGTGGAGAGCGACCGCGTGCAGACCCGAGCCGGCTTCAGCCCGCAGTGGACCAACGAGCAGGCGCAGGAGCAGGGCAATTGGAGCTCCTGGCTGACGCCGCTGCTGCTGGGCGTGGCGGCCACGCTGCTCTACAGGTACCTGTTTGTCTAG

Protein

MEGEMKLFTREELKSRSTRADAVLIIHNEVYDVTKFLLEHPGGEEVLLEKAGQDASEPFEDVSHSSDARSLMKKYKIGELVESDRVQTRAGFSPQWTNEQAQEQGNWSSWLTPLLLGVAATLLYRYLFV

Description

Cytochrome b5 is a membrane-bound hemoprotein which functions as an electron carrier for several membrane-bound oxygenases.

Similarity

Belongs to the cytochrome b5 family.

Keywords

Alternative splicing   Complete proteome   Electron transport   Endoplasmic reticulum   Heme   Iron   Membrane   Metal-binding   Microsome   Reference proteome   Transmembrane   Transmembrane helix   Transport   3D-structure  

Feature

chain  Cytochrome b5
splice variant  In isoform A.

Uniprot

A0A2H1VTT2   A0A212F5F3   A0A194PVZ8   A0A0N0PEQ7   A0A437BDM3   I4DS83   + More
A0A2A4JVR0   A0A2W1BA03   A0A0K8W0V0   A0A034WH44   A0A0A1WSM2   A0A1A9VJ04   E9P245   Q9V4N3   A8VEL0   A0A1A9X8P6   A0A1B0BYD8   S4P0Q1   B3N9X4   A0A1B0GBU5   A0A1A9Z7K7   A0A1W4V0B7   B4P1R4   A0A026W1U1   B4HR33   B4QEC2   B3MHB5   A0A0K8TSV5   A0A0M4EGS4   T1D375   A0A1S4FP08   A0A3B0JQS7   R4UNH6   B4MIM9   B4LMG8   B0XBR0   A0A182FC84   B4J6Y8   Q28YJ0   B4H8J7   W5JIU3   A0A1L8EES6   T1PG52   P49096   A0A2M3ZFP1   A0A1Q3FJ31   A0A2P8Y4U4   A0A182J4N3   A0A182QWS5   A0A2M4C3D7   A0A084WK70   A0A0C9R7X4   A0A182JND2   A0A182NK60   A0A2M4A4X1   T1DS14   E2A8N7   A0A182H1F9   A0A1I8Q4S4   A0A182S5V3   A0A182YEK9   A0A2R7VZP6   A0A067R3L8   B4KSK1   A0A182P0N2   A8QIU3   A0A182RP59   A0A0L0CBD8   R4WCP3   A0A182KQD2   A0A182VIG2   A0A182TII4   A0A182WWY8   Q86QH4   A0A182I2I7   A0A1A9WQP8   A0A1L8E0R6   A0A1L8E0L3   W8AJK5   A0A182WLI2   S4PD20   A0A0A9WVI7   A0A224XZZ2   A0A146KRA0   U5ETY5   A0A1D1YYA3   A0A154PN23   A0A0P4VIW4   R4G7X8   A0A212ESA8   A0A0L7LE81   V9IFS2   A0A088A5G3   A0A1B6CYB1   K7J3G4   A0A336LQE5   A0A3G1T1H8   Q5QBL0   A0A0R8YF94  

Pubmed

22118469    26354079    22651552    28756777    25348373    25830018    + More
21279680    10731132    12537572    12537569    23622113    17994087    17550304    24508170    30249741    22936249    26369729    24330624    15632085    20920257    23761445    29403074    24438588    20798317    26483478    25244985    24845553    26108605    23691247    20966253    12364791    14585502    14747013    17210077    24495485    25401762    26823975    27129103    26227816    20075255    15796745   

EMBL

ODYU01004391    SOQ44220.1    AGBW02010203    OWR48971.1    KQ459596    KPI95305.1    + More
KQ459717    KPJ20319.1    RSAL01000083    RVE48432.1    AK405463    BAM20773.1    NWSH01000539    PCG75778.1    KZ150445    PZC70844.1    GDHF01007542    JAI44772.1    GAKP01004056    JAC54896.1    GBXI01012213    JAD02079.1    HQ864711    JN374926    JN374927    JN374928    JN374929    JN374930    JN374931    JN374932    JN374933    JN374934    JN374935    JN374936    JN374937    JN374938    JN374939    JN374940    JN374941    JN374942    JN374943    JN374944    JN374945    JN374946    JN374947    JN374948    KX532130    ADW95864.1    AEO12023.1    AEO12024.1    AEO12025.1    AEO12026.1    AEO12027.1    AEO12028.1    AEO12029.1    AEO12030.1    AEO12031.1    AEO12032.1    AEO12033.1    AEO12034.1    AEO12035.1    AEO12036.1    AEO12037.1    AEO12038.1    AEO12039.1    AEO12040.1    AEO12041.1    AEO12042.1    AEO12043.1    AEO12044.1    AEO12045.1    ANY27940.1    AE013599    BT001378    BT004852    BT015196    EU166920    ABW37749.1    JXJN01022588    GAIX01007584    JAA84976.1    CH954177    EDV59670.1    CCAG010005890    CM000157    EDW89200.1    KK107487    QOIP01000006    EZA50032.1    RLU21665.1    CH480816    EDW46776.1    CM000362    CM002911    EDX06031.1    KMY92013.1    CH902619    EDV36892.1    GDAI01000161    JAI17442.1    CP012524    ALC41660.1    GALA01001363    JAA93489.1    OUUW01000001    SPP75716.1    KC740896    AGM32720.1    CH963719    EDW71968.1    CH940648    EDW62063.1    AB332028    DS232648    BAI77920.1    EDS44409.1    CH916367    EDW02069.1    CM000071    EAL25975.2    CH479223    EDW35032.1    ADMH02001376    ETN62714.1    GFDG01001572    JAV17227.1    KA646863    AFP61492.1    L38464    GGFM01006601    MBW27352.1    GFDL01007425    JAV27620.1    PYGN01000929    PSN39277.1    AXCN02000429    GGFJ01010695    MBW59836.1    ATLV01024097    KE525349    KFB50614.1    GBYB01002871    JAG72638.1    GGFK01002484    MBW35805.1    GAMD01000400    JAB01191.1    GL437652    EFN70224.1    JXUM01103328    JXUM01103329    JXUM01103330    JXUM01103331    JXUM01103332    KQ564796    KXJ71737.1    KK854198    PTY12966.1    KK852927    KDR13701.1    CH933808    EDW09506.1    EF035450    ABM01874.1    JRES01000655    KNC29547.1    AK417028    BAN20243.1    AY183376    AAAB01008807    AAO24766.1    EAA04154.2    APCN01000164    GFDF01001815    JAV12269.1    GFDF01001814    JAV12270.1    GAMC01017791    GAMC01017790    JAB88765.1    GAIX01005152    JAA87408.1    GBHO01033091    GBRD01010377    JAG10513.1    JAG55447.1    GFTR01002234    JAW14192.1    GDHC01020713    JAP97915.1    GANO01002571    JAB57300.1    GDJX01008367    JAT59569.1    KQ434998    KZC13281.1    GDKW01002599    JAI53996.1    ACPB03017900    GAHY01001947    JAA75563.1    AGBW02012839    OWR44367.1    JTDY01001565    KOB73516.1    JR045093    AEY59930.1    GEDC01019045    JAS18253.1    UFQT01000040    SSX18627.1    MG992403    AXY94841.1    AY752801    AAV84214.1    KP083295    ALA55992.1   

Proteomes

UP000007151    UP000053268    UP000053240    UP000283053    UP000218220    UP000078200    + More
UP000000803    UP000092443    UP000092460    UP000008711    UP000092444    UP000092445    UP000192221    UP000002282    UP000053097    UP000279307    UP000001292    UP000000304    UP000007801    UP000092553    UP000268350    UP000007798    UP000008792    UP000002320    UP000069272    UP000001070    UP000001819    UP000008744    UP000000673    UP000095301    UP000245037    UP000075880    UP000075886    UP000030765    UP000075881    UP000075884    UP000000311    UP000069940    UP000249989    UP000095300    UP000075901    UP000076408    UP000027135    UP000009192    UP000075885    UP000075900    UP000037069    UP000075882    UP000075903    UP000075902    UP000076407    UP000007062    UP000075840    UP000091820    UP000075920    UP000076502    UP000015103    UP000037510    UP000005203    UP000002358   

PRIDE

E9P245    Q9V4N3    A8VEL0   

Pfam

PF00173   Cyt-b5

Interpro

IPR018506   Cyt_B5_heme-BS        + More
IPR001199   Cyt_B5-like_heme/steroid-bd       
IPR036400   Cyt_B5-like_heme/steroid_sf       

SUPFAM

SSF55856   SSF55856       

Gene 3D

3.10.120.10    

ProteinModelPortal

A0A2H1VTT2   A0A212F5F3   A0A194PVZ8   A0A0N0PEQ7   A0A437BDM3   I4DS83   + More
A0A2A4JVR0   A0A2W1BA03   A0A0K8W0V0   A0A034WH44   A0A0A1WSM2   A0A1A9VJ04   E9P245   Q9V4N3   A8VEL0   A0A1A9X8P6   A0A1B0BYD8   S4P0Q1   B3N9X4   A0A1B0GBU5   A0A1A9Z7K7   A0A1W4V0B7   B4P1R4   A0A026W1U1   B4HR33   B4QEC2   B3MHB5   A0A0K8TSV5   A0A0M4EGS4   T1D375   A0A1S4FP08   A0A3B0JQS7   R4UNH6   B4MIM9   B4LMG8   B0XBR0   A0A182FC84   B4J6Y8   Q28YJ0   B4H8J7   W5JIU3   A0A1L8EES6   T1PG52   P49096   A0A2M3ZFP1   A0A1Q3FJ31   A0A2P8Y4U4   A0A182J4N3   A0A182QWS5   A0A2M4C3D7   A0A084WK70   A0A0C9R7X4   A0A182JND2   A0A182NK60   A0A2M4A4X1   T1DS14   E2A8N7   A0A182H1F9   A0A1I8Q4S4   A0A182S5V3   A0A182YEK9   A0A2R7VZP6   A0A067R3L8   B4KSK1   A0A182P0N2   A8QIU3   A0A182RP59   A0A0L0CBD8   R4WCP3   A0A182KQD2   A0A182VIG2   A0A182TII4   A0A182WWY8   Q86QH4   A0A182I2I7   A0A1A9WQP8   A0A1L8E0R6   A0A1L8E0L3   W8AJK5   A0A182WLI2   S4PD20   A0A0A9WVI7   A0A224XZZ2   A0A146KRA0   U5ETY5   A0A1D1YYA3   A0A154PN23   A0A0P4VIW4   R4G7X8   A0A212ESA8   A0A0L7LE81   V9IFS2   A0A088A5G3   A0A1B6CYB1   K7J3G4   A0A336LQE5   A0A3G1T1H8   Q5QBL0   A0A0R8YF94  

PDB

2IBJ     E-value=6.75326e-23,     Score=258

KEGG

101740825    K23490 cytochrome b5 | (RefSeq) cytochrome b5-like

GO

GO:0046872   GO:0016021   GO:0020037   GO:0045610   GO:0055114   GO:0035206   GO:0005789   GO:0012505   GO:0051537   GO:0006468   GO:0008152   GO:0016491   GO:0016620   GO:0006418   GO:0003676   GO:0016876   GO:0043039  

Subcellular location

Endoplasmic reticulum membrane  
Microsome membrane  

Length:

129

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

15.1641

Exp number, first 60 AAs:

0.00022

Total prob of N-in:

0.55226

outside

1  -  129

 

 

Pi

190.14222

Theta

204.80882

Tajima's D

-0.617368

CLR

3.459808

CSRT

0.215689215539223

Interpretation

Uncertain