SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08580
Pre Gene Modal
BGIBMGA007979
Annotation
PREDICTED:_cell_division_cycle_7-related_protein_kinase-like_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.533
 

Sequence

CDS
ATGTCCAGATCTAGGGGATTTGAAATAAGAGAAGGGTTACGTTCTCATAAAAAGCTCAAAGAAAATAAAAATGAAAATGAGACTTCTGATTCTTCTGAACGTGAACAAATATGTGAACTTTTATATAAGCTACCAAAACTGGACAAGATTTTTGAAGTGCACCGAAAGATAGGAGAAGGAACATTTAGTTCAGTGTATTTAGGCTCACTGAGACAGCATTCATCTTTGCTAGACAAAGACAAGCGTTGGTTTGCCATAAAACACTTGGTACCTACTGCACATCCAGCTCGGATTGAACACGAGTTAAGGTGTCTACAGGACATAGGAGGCAAACATCATGTGATTGGAGTGGAGCTCTGTCTTCGTAATCTCGACACTATTGTATTTGTAATGCCCTATCTACCTCATAAAAAGTTTTCTGAGTACGTGGGCGACATGGACGCGGCCGAGCTGCGCGAGTACATGCGCGCGCTGCTCGAGGCGCTCCGGCACGTGCACTCGTTCGGTGTCATACATCGAGACGTCAAACCCAGTAACTTTTTGTACGATCGAGAAAATAGGAGATATCAATTAGTAGACTTCGGCCTGGCTCAGCGACTGGTCCCCGGCACCGACGAGGAGCCCCCGGCGCCCCCCCGGTCCTCGGCCCCCCGCAAGCGTCCCCGGGAGGCCGAGGGCGCCACACCGGAAGCGAAGCGACTCGCACTTGACCTCTCACTGAAGACTAACGCTAGCAAAATATCTATTGTTGAAACTAATCCCATGCCGCTGTCTCCTAGAAGCAATGTCAAGAGAGCGGCGCCGTGCGCGTGCGCGGGTCGCGGCGCGGTGTGCGGCGCGTGCAGCGTGCGCCCCCCCGCCCGCGCCCCGCGCGCCGGCACGCAGGGCTTCCGCCCCCCCGAGGTGCTGCTGCGGTACGGCGCGCAGACCACCGCCGTGGACACGTGGGCGTGCGGCGTCGTGCTGTGCTCCGTGCTCACCGCGCGCTACCCGCTGCTGCGCGCCGCCGACGACCTCGCCGCCCTCGCCGAGCTCGCCGCGCTGCTCGGCACCCGCCCCCTGCAGCGCGCCGCCGCCGCCCTCGGTCGCCGTTTGATCACATCGTCCCCCCGACGCGGGCTGTGTCTCCGCAAGCTGTGCGCCCGCCTCCGCGGCTGTCCCCCCCCGGCCCCCGCGGCGCCGACCCCCGGCCCCCGGGCCCGCGCCCCCCGCCCCCTCCTCCCGGCGGCGTCGTGCTTGCACTGTCGGTGCCTCACGCACGAGTGTATTTGTCGAGACGAGGATAAAGACGCCGCCGCGGTGTCCCCGGGCCGCAGCGTGGCGGGGTTCCCGGACAGCGCGTTCTCGCTGTGCTGGCGGCTGCTGCAGCCGCTGCCGGCGCACAGGCTCTCCGCGGAGCAGGCCCTCCAACACGAGTTCTTCAACTCCTGA
Protein
MSRSRGFEIREGLRSHKKLKENKNENETSDSSEREQICELLYKLPKLDKIFEVHRKIGEGTFSSVYLGSLRQHSSLLDKDKRWFAIKHLVPTAHPARIEHELRCLQDIGGKHHVIGVELCLRNLDTIVFVMPYLPHKKFSEYVGDMDAAELREYMRALLEALRHVHSFGVIHRDVKPSNFLYDRENRRYQLVDFGLAQRLVPGTDEEPPAPPRSSAPRKRPREAEGATPEAKRLALDLSLKTNASKISIVETNPMPLSPRSNVKRAAPCACAGRGAVCGACSVRPPARAPRAGTQGFRPPEVLLRYGAQTTAVDTWACGVVLCSVLTARYPLLRAADDLAALAELAALLGTRPLQRAAAALGRRLITSSPRRGLCLRKLCARLRGCPPPAPAAPTPGPRARAPRPLLPAASCLHCRCLTHECICRDEDKDAAAVSPGRSVAGFPDSAFSLCWRLLQPLPAHRLSAEQALQHEFFNS

Summary

Similarity
Belongs to the protein kinase superfamily.
Pfam
PF00069   Pkinase
Interpro
IPR000719   Prot_kinase_dom        + More
IPR017441   Protein_kinase_ATP_BS       
IPR008271   Ser/Thr_kinase_AS       
IPR011009   Kinase-like_dom_sf       
SUPFAM
SSF56112   SSF56112       
PDB
4F9C     E-value=4.69169e-45,     Score=457

Ontologies

Topology

Length:
476
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.1021
Exp number, first 60 AAs:
4e-05
Total prob of N-in:
0.00534
outside
1  -  476
 
 

Population Genetic Test Statistics

Pi
191.060689
Theta
156.89078
Tajima's D
0.712733
CLR
0.417148
CSRT
0.577421128943553
Interpretation
Uncertain
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