Gene

KWMTBOMO08577

Annotation

PREDICTED:_uncharacterized_protein_LOC105386400_[Plutella_xylostella]

Location

Bomo_Chr15(+):261948-266169      View in EpiBrowser

Transcription factor

THAP

Location in the cell

Nuclear   Reliability : 2.944

CDS

ATGCCGAGACGCTGTATATTAAAATGTGCACCAGAACCTGGTGTAAGGTTTCACGTATTTCCCAGCCTAGAGAGTAAACCTGAACGTTTTAAGGCATGGGTTCAAGCAATTGGAGGTAAACTGGATACCCCAGAGGACTATGAATACTACAGAAACCAACGCATATGTGATCGGCATTTTGCAAAAGAAAATAAAAACCGATACAATCGTGTGGACGCTTTGGGAGTTCCATCGCTTCATTTAATCGAAACTGATCTGGGAGAAAGAGAAAAAAATTCTTTAGGAGAAAGCTTTGCCTCCTCAGTACAAGAGACATTGAATTTGGATGTTATTGAACCTACAACTTCCAATGTCCTAGTTGAAGATATGATGACACGGAACAATAGTTTATCCTTGCGAAAATATAATATGTACCAAAGTCAAATCAAACAATTAAGGAAAAGAGTGAACACTTTTCAAAAAAGAGAAGATAACTTCAGGACAAGATTAGCAAATGCTGAAAAGATTACTGATGAATCTGCATTTAAAAGGATTGCCAAAAATATGACTCTGCCTGCAAAGATTTTTACGAATATGCAGTTTCGCACTACGTCAAAAAAACCGTCGGGCAGGAGATTTCTATTAGAAGAAAAAGTGCTATCATTAACACTCTACAAAAGAAGTCCCAAATGTTATTCAATGTTGTCCAGGTATTTTTCTTTACCAGCGCCTAAAACTTTGAAAAGACTTCTCAGTGAAATTAAATTGGGCCCTGGTATCAATACGATTGTTATGGAAAAATTAAAGAAAACTGTTAGTGAGCTCACCATGGAAGACCGCTTGTGCACTTTAATTTTTGATGAGATGTCTATAACCCCTCAGCTGCATTATGATGCAGCAAAAGACCAATTAAAAGGGTTCACAAGCCATGGACACAAATTAGCAGATCATGCCTTAGTTTTTATGGCAGACTATTTAAGACAGAATAAAGAATGGAGACAAGATTTCTTTGAAATTAATAAGAAAATAATTATACCTCTTTACGATGTTCCACATCTCATCAAGGGATTACGCAATAATCTCCTCACCAAAGATATGTATTATAAAGACGATGAAGATAAAGGCAAAATCAAAAAAGTGAAGTGGGAATATTTCCAATTGCTGTATGAGGCTGACAAATCATATGGAGAGTTAAGATGCCTTCAGAAATTAACAGAGGAGCATGTTAATCCTGATAAAATTAAGAAGATGCGAGTGAAGGCAGCAACGCAACTGTTCAGTCACAGTGTGGCTGTAGCCACTGAGCATTTAACAGCCAGAGGGAATTTGCCACAGGAGTGCAGGGATATAATTCCAATTGTATTAATAATTGACAAATTATTTGACAGTTTAAATGGTAACACTTTTCATGTACCCAACGGAAAACTACATAAAGGGCCTGTTAAAAGGATGCTGGGCAAAGGACATACGTGTGTGGCTGGGTTCTTACCAAATGTTTGA

Protein

MPRRCILKCAPEPGVRFHVFPSLESKPERFKAWVQAIGGKLDTPEDYEYYRNQRICDRHFAKENKNRYNRVDALGVPSLHLIETDLGEREKNSLGESFASSVQETLNLDVIEPTTSNVLVEDMMTRNNSLSLRKYNMYQSQIKQLRKRVNTFQKREDNFRTRLANAEKITDESAFKRIAKNMTLPAKIFTNMQFRTTSKKPSGRRFLLEEKVLSLTLYKRSPKCYSMLSRYFSLPAPKTLKRLLSEIKLGPGINTIVMEKLKKTVSELTMEDRLCTLIFDEMSITPQLHYDAAKDQLKGFTSHGHKLADHALVFMADYLRQNKEWRQDFFEINKKIIIPLYDVPHLIKGLRNNLLTKDMYYKDDEDKGKIKKVKWEYFQLLYEADKSYGELRCLQKLTEEHVNPDKIKKMRVKAATQLFSHSVAVATEHLTARGNLPQECRDIIPIVLIIDKLFDSLNGNTFHVPNGKLHKGPVKRMLGKGHTCVAGFLPNV

Uniprot

A0A3S2NSI9   A0A3S2KX83   A0A437BCW2   A0A3S2LM91   A0A3S2LWA3   A0A437ASS2   + More
J9LY75   X1XB84   J9M4P5   J9M897   J9KX16   X1X0R9   A0A1Y1LY36   J9L7T1   A0A2A4JY71   J9KBW7   A0A2A4JZ58   A0A1Y1JZB1   A0A437AU19   J9KGM8   X1XNR4   J9LCP7   A0A1Y1NI49   J9L862   J9KCZ1   A0A437BL44   A0A1Y1KLF8   J9KI00   A0A3S2TA47   A0A2J7QSC0   J9L6Z3   A0A3S2LEZ0   X1XTB8  

Pubmed

28004739   

EMBL

RSAL01000257    RVE43416.1    RSAL01002057    RVE40596.1    RSAL01000087    RVE48224.1    + More
RSAL01003176    RVE40327.1    RSAL01000161    RVE45426.1    RSAL01000699    RVE41218.1    ABLF02012658    ABLF02011758    ABLF02011759    ABLF02008684    ABLF02008686    ABLF02008687    ABLF02019592    ABLF02023911    ABLF02028653    ABLF02048521    ABLF02061836    ABLF02064667    GEZM01045715    JAV77678.1    ABLF02017696    NWSH01000363    PCG76967.1    ABLF02006763    PCG76968.1    GEZM01101736    JAV52346.1    RSAL01000475    RVE41592.1    ABLF02012220    ABLF02012222    ABLF02053218    ABLF02061299    ABLF02009194    GEZM01001796    JAV97521.1    ABLF02003317    ABLF02010389    RSAL01000037    RVE51172.1    GEZM01085096    JAV60236.1    ABLF02055473    ABLF02056006    RSAL01005638    RVE39985.1    NEVH01011876    PNF31489.1    ABLF02009647    ABLF02009778    ABLF02009779    ABLF02025341    ABLF02042390    RSAL01000165    RVE45277.1    ABLF02063349   

Proteomes

UP000283053    UP000007819    UP000218220    UP000235965   

Pfam

PF12017   Tnp_P_element        + More
PF03564   DUF1759
PF04727   ELMO_CED12
PF05585   DUF1758
PF05485   THAP
PF03732   Retrotrans_gag
PF14291   DUF4371
PF05699   Dimer_Tnp_hAT

Interpro

IPR006816   ELMO_dom        + More
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR021109   Peptidase_aspartic_dom_sf       
IPR008737   Peptidase_asp_put       
IPR006612   THAP_Znf       
IPR005312   DUF1759       
IPR021896   Transposase_37       
IPR038441   THAP_Znf_sf       
IPR005162   Retrotrans_gag_dom       
IPR025398   DUF4371       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR008906   HATC_C_dom       

SUPFAM

SSF57756   SSF57756        + More
SSF56219   SSF56219       

Gene 3D

2.40.70.10     3.30.40.180     3.60.10.10    

ProteinModelPortal

A0A3S2NSI9   A0A3S2KX83   A0A437BCW2   A0A3S2LM91   A0A3S2LWA3   A0A437ASS2   + More
J9LY75   X1XB84   J9M4P5   J9M897   J9KX16   X1X0R9   A0A1Y1LY36   J9L7T1   A0A2A4JY71   J9KBW7   A0A2A4JZ58   A0A1Y1JZB1   A0A437AU19   J9KGM8   X1XNR4   J9LCP7   A0A1Y1NI49   J9L862   J9KCZ1   A0A437BL44   A0A1Y1KLF8   J9KI00   A0A3S2TA47   A0A2J7QSC0   J9L6Z3   A0A3S2LEZ0   X1XTB8  

KEGG

NA   

GO

GO:0003677   GO:0006313   GO:0004803   GO:0003676   GO:0046983   GO:0016021   GO:0022891   GO:0004812   GO:0006418   GO:0016876   GO:0043039  

Length:

492

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00122

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00649

outside

1  -  492

 

 

Pi

322.825661

Theta

184.835727

Tajima's D

2.231617

CLR

0.292354

CSRT

0.916454177291135

Interpretation

Uncertain