Gene

KWMTBOMO08570

Annotation

unnamed_protein_product_[Tribolium_castaneum]

Location

Bomo_Chr15(-):4567-6095      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.489 Mitochondrial   Reliability : 1.806

CDS

ATGGGCATGGCACAAATTCAAAGCATAGCTGATGGCCTCTTCCCGGAACACATAGATTTCGAACGGAAAACGAAACCGTCACAGGAGTTCCCAGAGGTGACCGAGGAGGAGATCATCCAACTAAAAGCTCGCATAAAGCTCAGGAAAGCCCCAGGGCCCGACCGGATTCCGCCGGAGATAGTGACTCTAGCAGTAGCAGTAATTCCAGACAGGATAAGGCTTGTGTTGCAGAAGGTGCTGGAGTCTGGCGTCTTCCCCAACAGCTGGAAAACAGCCAGACTAGTCCTGCTAAGAAAACCAGGCAAACCCGCTGAAGATCCTGCGGGGCACAGGCCGCTATGTCTACTGGACTGCTACGGAAAGCTGCTGGAGTCGCTGATCCTAGGCAGAATAGAAAAAACAACTACCAACAAGCTACTTGAGATAGCGGAAGACGCGAGACGAGGAACCCACCGCACCAGAAGAATCTGCGCAGTAGTGGCCCTCGACGTCCGTAATGCTTTCAATTCTGCATCGTGGGAGCTCATCCTGGAGGAAATGGCTGCAATAGGTATGCCTCAATACATCTATAATATCATAAACAGCTACCTCCAGGACAGATGCATCATACTGACAGACGCTGAGGGAGGGGTTGTAGTGAAAAAGGTTACCGGTGGTGTTCCGCAGGGGTCGATACTGGGCCCCACGCTGTGGAACATACTGTATGATGGGGTACTGCGCCTCGAACTGGGGGATGGGGCACAATTAATAGGCTTCGCGGACGATTTAGCTCTGGTGGTGTCAGCAAAGAAGGAAGCAGAACTAATGGCAATAACGAATGTAGCCCTACAAAAGATCAGCGCTTGGATGAAGCAAAAGCGGCTACACTTGGCCCCAGAAAAGACCGAGGCAATTGTGCTAAGTGGGCGAAGAAAGCTTAGCGAGATTTGCTTTACCCTCCAGGGCGTCAGGGTGGTTCCAACCGACAAACTGAAATACCTCGGGTTTTGGTTTGACAAAAGTCTGAAGTTCGGCAAACACATTGAAGAAACAACTGGTAAAGCCGAAAGACTGACGACCGCCCTTGGCCAAATCATGCCCAGGAAAGGAGGGCCGAGGTCGAGCAAGCGCAGACTATTGGCGTCCGCAATACAATCTGTGATGTTATATGGAGCACCGGTGTGGGCAAAGGTAATGAATGTAGCGAAGTACAGGAACATGTATAGCAAAGTGCCAACGACAGCTGGCAATACGCATCTGTGGAGCTTACCGTACCATATCGCTAGACGCCGTCTTGGTGATAGCGGGCCTGATACCGATAGAACGGCTAGCAAAGGAACCGGCAACGCTACTACCACGAGGGGACAAGAACGAGAGAAGAGGAAAGAGCACATACAATAA

Protein

MGMAQIQSIADGLFPEHIDFERKTKPSQEFPEVTEEEIIQLKARIKLRKAPGPDRIPPEIVTLAVAVIPDRIRLVLQKVLESGVFPNSWKTARLVLLRKPGKPAEDPAGHRPLCLLDCYGKLLESLILGRIEKTTTNKLLEIAEDARRGTHRTRRICAVVALDVRNAFNSASWELILEEMAAIGMPQYIYNIINSYLQDRCIILTDAEGGVVVKKVTGGVPQGSILGPTLWNILYDGVLRLELGDGAQLIGFADDLALVVSAKKEAELMAITNVALQKISAWMKQKRLHLAPEKTEAIVLSGRRKLSEICFTLQGVRVVPTDKLKYLGFWFDKSLKFGKHIEETTGKAERLTTALGQIMPRKGGPRSSKRRLLASAIQSVMLYGAPVWAKVMNVAKYRNMYSKVPTTAGNTHLWSLPYHIARRRLGDSGPDTDRTASKGTGNATTTRGQEREKRKEHIQ

Uniprot

A0A1B6KDF3   F7IYV5   D7GXX9   A0A1W7R6C5   A0A139W8G2   F7IYU8   + More
V5I881   A0A139WAH4   A0A139WN93   A0A139WNC9   A0A142LX45   A0A139W940   T1DCM0   T1DG59   A0A139W9B3   T1DG89   A0A139W939   A0A139W9J0   A0A1S4EMG7   D6WC19   A0A0K8TR60   J9KUM6   W8AMZ9   A0A2M4CL98   J9KJG8   V5GWW9   A0A2S2N8I2   A0A2H8TR36   A0A1W7R6I9   J9L6Z9   A0A2M4CS98   A0A023EW96   J9KT61   A0A2M4AGH2   F7IYV3   N6TYN9   A0A0E3W2C5   A0A2M4AHG6   A0A2M4ADW9   F7IYV2   J9L0J0   W8ADE4   W8ANK7   A0A034WR48   V5I8F3   J9KV04   U4TRW5   A0A2M4BDI3   A0A2M4BC01   A0A2M4CKQ7   A0A2M4BBV9   J9LVU7   A0A139W9A6   A0A2S2NW56   A0A142LX37   X1WQ45   A0A0K8S5I5   A0A2M4BC28   J9LBG0   A0A2S2P488   V9GZD9   K7JP45   A0A2S2PRL8   X1X6F1   Q868S4   Q868S0   A0A2M4BCE1   N6UIP2   A0A2M4CJY9   A0A1S3DCR6   Q868T0   A0A224XIZ2   J9KNN8   A0A2M4CSA9   J9LQQ1   A0A2M4CSI6   A0A139W9I2   A0A2M3Z1V8   A0A2H8TIE5   J9LBB9   X1WZ64   A0A139W8J5   A0A2M3Z1C1   F7IYV7   A0A2M4BB78   A0A2M4BB89   J9KM84   Q9N9Z1   J9LM37   A0A2M4AK35   A0A142LX43   A0A2M4BC18   J9KNG8   J9JZR8   D7EIB0   A0A2M4CJ59   A0A2M4BC24   A0A2M4CKD9   V5G2Q2   A0A2M4CJ33  

Pubmed

18362917    19820115    25527032    24330624    26369729    24495485    + More
24945155    23537049    25348373    1328871    20075255    12644555   

EMBL

GEBQ01030504    JAT09473.1    AB593325    BAK38646.1    KQ972160    EFA13619.2    + More
GEHC01000964    JAV46681.1    KQ973343    KXZ75566.1    AB593321    BAK38639.1    GALX01005145    JAB63321.1    KQ971388    KYB24913.1    KQ971310    KYB29499.1    KYB29500.1    KU543683    AMS38371.1    KQ972691    KXZ75806.1    GALA01001777    JAA93075.1    GALA01000302    JAA94550.1    KQ972544    KXZ75869.1    GALA01001776    JAA93076.1    KXZ75807.1    KQ972226    KYB24577.1    KQ971309    EEZ99146.1    GDAI01000741    JAI16862.1    ABLF02041557    GAMC01019173    JAB87382.1    GGFL01001916    MBW66094.1    ABLF02041886    GALX01002229    JAB66237.1    GGMR01000779    MBY13398.1    GFXV01003903    MBW15708.1    GEHC01000915    JAV46730.1    ABLF02021100    GGFL01004044    MBW68222.1    GAPW01000192    JAC13406.1    ABLF02009073    ABLF02030702    ABLF02042963    GGFK01006563    MBW39884.1    AB593324    BAK38644.1    APGK01005465    KB736249    ENN83233.1    HACL01000281    CFW94575.1    GGFK01006866    MBW40187.1    GGFK01005660    MBW38981.1    AB593323    BAK38643.1    ABLF02027248    GAMC01020519    GAMC01020515    JAB86040.1    GAMC01020517    JAB86038.1    GAKP01002292    JAC56660.1    GALX01004785    JAB63681.1    ABLF02004674    ABLF02004675    ABLF02004676    ABLF02011637    KB630188    ERL83462.1    GGFJ01001727    MBW50868.1    GGFJ01001370    MBW50511.1    GGFL01001583    MBW65761.1    GGFJ01001369    MBW50510.1    ABLF02034925    KXZ75870.1    GGMR01008673    MBY21292.1    KU543679    AMS38363.1    ABLF02004920    ABLF02004921    ABLF02015191    ABLF02016615    ABLF02024214    GBRD01017378    JAG48449.1    GGFJ01001439    MBW50580.1    ABLF02021645    GGMR01011682    MBY24301.1    M93691    AAA29365.1    AAZX01001144    GGMR01019493    MBY32112.1    ABLF02016340    AB090815    BAC57906.1    AB090817    BAC57910.1    GGFJ01001541    MBW50682.1    APGK01033685    KB740885    ENN78512.1    GGFL01001456    MBW65634.1    AB090812    BAC57900.1    GFTR01008427    JAW07999.1    ABLF02023257    GGFL01004046    MBW68224.1    ABLF02030663    ABLF02041312    GGFL01004047    MBW68225.1    KQ972255    KYB24568.1    GGFM01001733    MBW22484.1    GFXV01002090    MBW13895.1    ABLF02020562    ABLF02011183    ABLF02041884    KQ973256    KXZ75595.1    GGFM01001554    MBW22305.1    AB593327    BAK38648.1    GGFJ01001164    MBW50305.1    GGFJ01001165    MBW50306.1    ABLF02018942    ABLF02041885    AJ278684    CAB99192.1    ABLF02014650    GGFK01007771    MBW41092.1    KU543682    AMS38369.1    GGFJ01001453    MBW50594.1    ABLF02005203    ABLF02041316    ABLF02009709    ABLF02009711    AB593322    BAK38641.1    GGFL01001189    MBW65367.1    GGFJ01001454    MBW50595.1    GGFL01001190    MBW65368.1    GALX01004171    JAB64295.1    GGFL01001192    MBW65370.1   

Proteomes

UP000007266    UP000079169    UP000007819    UP000019118    UP000030742    UP000002358    + More

PRIDE

Q9N9Z1   

Pfam

PF00078   RVT_1        + More
PF14529   Exo_endo_phos_2
PF00098   zf-CCHC
PF13966   zf-RVT
PF00075   RNase_H
PF12017   Tnp_P_element
PF13359   DDE_Tnp_4

Interpro

IPR000477   RT_dom        + More
IPR005135   Endo/exonuclease/phosphatase       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR000663   Natr_peptide       
IPR026960   RVT-Znf       
IPR012337   RNaseH-like_sf       
IPR002156   RNaseH_domain       
IPR036397   RNaseH_sf       
IPR021896   Transposase_37       
IPR027806   HARBI1_dom       

SUPFAM

SSF56219   SSF56219        + More
SSF57756   SSF57756       
SSF53098   SSF53098       

Gene 3D

3.60.10.10     3.30.420.10    

ProteinModelPortal

A0A1B6KDF3   F7IYV5   D7GXX9   A0A1W7R6C5   A0A139W8G2   F7IYU8   + More
V5I881   A0A139WAH4   A0A139WN93   A0A139WNC9   A0A142LX45   A0A139W940   T1DCM0   T1DG59   A0A139W9B3   T1DG89   A0A139W939   A0A139W9J0   A0A1S4EMG7   D6WC19   A0A0K8TR60   J9KUM6   W8AMZ9   A0A2M4CL98   J9KJG8   V5GWW9   A0A2S2N8I2   A0A2H8TR36   A0A1W7R6I9   J9L6Z9   A0A2M4CS98   A0A023EW96   J9KT61   A0A2M4AGH2   F7IYV3   N6TYN9   A0A0E3W2C5   A0A2M4AHG6   A0A2M4ADW9   F7IYV2   J9L0J0   W8ADE4   W8ANK7   A0A034WR48   V5I8F3   J9KV04   U4TRW5   A0A2M4BDI3   A0A2M4BC01   A0A2M4CKQ7   A0A2M4BBV9   J9LVU7   A0A139W9A6   A0A2S2NW56   A0A142LX37   X1WQ45   A0A0K8S5I5   A0A2M4BC28   J9LBG0   A0A2S2P488   V9GZD9   K7JP45   A0A2S2PRL8   X1X6F1   Q868S4   Q868S0   A0A2M4BCE1   N6UIP2   A0A2M4CJY9   A0A1S3DCR6   Q868T0   A0A224XIZ2   J9KNN8   A0A2M4CSA9   J9LQQ1   A0A2M4CSI6   A0A139W9I2   A0A2M3Z1V8   A0A2H8TIE5   J9LBB9   X1WZ64   A0A139W8J5   A0A2M3Z1C1   F7IYV7   A0A2M4BB78   A0A2M4BB89   J9KM84   Q9N9Z1   J9LM37   A0A2M4AK35   A0A142LX43   A0A2M4BC18   J9KNG8   J9JZR8   D7EIB0   A0A2M4CJ59   A0A2M4BC24   A0A2M4CKD9   V5G2Q2   A0A2M4CJ33  

KEGG

105842356    no KO assigned | (RefSeq) uncharacterized LOC105842356

GO

GO:0003964   GO:0003676   GO:0008270   GO:0005179   GO:0005576   GO:0004519   GO:0016021   GO:0004523   GO:0004803   GO:0006313  

Length:

459

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.56771

Exp number, first 60 AAs:

0.00021

Total prob of N-in:

0.00745

outside

1  -  459

 

 

Pi

0

Theta

0

Tajima's D

0

CLR

130.658719

CSRT

0

Interpretation

Uncertain