Gene

KWMTBOMO08565

Pre Gene Modal

BGIBMGA009308

Annotation

PREDICTED:_protein_cereblon-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr14(-):13274372-13284684      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.24 Nuclear   Reliability : 1.084

CDS

ATGGATCTAGATGAGAACTCACTTGATAGCGAATCGCTGCAAAGAGTCTCTGCTAGTGAAGAAGTGGATGACGAGCAGACAACCTCAGAAGATGAGCAAGACTTTGACATCTCTTTAGCTGCCTCGCATTCCTACATGGGCGGAGGGCTCAGCTCGGTGCGAGGGCGCGTGGTGCTGGAGGCGGGCTGGGAGGGCCGCGTGCCGGTGGTGGCGCACCACGGCGCCGTGTTCCCGGGAGAGACCGTGCCCATGCTCGTGTCCAACGCGCACGACGCCGCCATCGTACAGAAAATCAAGGACGACAAACTCTTCGGCTTGCTGTGCCCCGACGGCGACAACGGCGCGGCGGTGTCGGGGTACGGCGCGCTGTGCGAGGTGTACGAGGCGGCGCTGGGCGGGGCCGCCGAGCCCGCCGCGCTCAGCTTCAAGGCGCGCGCCACGCACCGCTTCCGCTTCTGCCACATGCCCAAGTCTTCCGTGCCCATACACCTCTACGCCAGACTGCGGCTGGCGGACGTGCGCGTGCTGCCCGACGTGTGCGGCCCCCCGCCGCTGCGCGCCCCCGGCCTGGACTCGCTCAGGTCGCGGCGGGGGCTGCGCTACGTGGACGCGGCGCTCACGGCGTGGCCCGCGTTCGTCTACGACATGTTCGACTACGAGCGCATGCGGAACATCATCAAGGCGTACTTCGACACGCTGATGCTGGACGCGCTGCCGGAGGGCGCCGTGTCGCTGTCGTACTGGGTGGCGTCCAACCTGACGCTGGGCGCGCGCGACCGCCTGGCGCTGTTCGCGGTGGACGACGCGCTGCTGCGGCTGCACCTCGAGGTGCGCTTCATCACTCAGTTCTCCCGCGCCCAGAAGTGCGCGCTGTGCTGCGGGTCCTGCGGCGGGGAGGTGGCGCAGCGCGAGCACGTGTTCCCCATGTCCAGCCACGGCGTGCACTCCAACTACACCAACCCGGGCGGGTACGTGCACGGCGTGGTGACGGTGACGCGCGCGCGCGCCGCGCCCGGCGGCCCGCCCTCCGCCGACTACTCGTGGTTCCCCGGCTACAGCTGGACCGTCGCGCTGTGCCGAGACTGCCGCGCGCACGTGGGCTGGAGGTTCGACGCCATAAAGAGGAGCCTCCGCCCGCAGCAGTTCTACGGGCTCTGCAGGAACTACGTGCAGCCGCGACACCACGACCAGGACCTCGCCGACTACTGA

Protein

MDLDENSLDSESLQRVSASEEVDDEQTTSEDEQDFDISLAASHSYMGGGLSSVRGRVVLEAGWEGRVPVVAHHGAVFPGETVPMLVSNAHDAAIVQKIKDDKLFGLLCPDGDNGAAVSGYGALCEVYEAALGGAAEPAALSFKARATHRFRFCHMPKSSVPIHLYARLRLADVRVLPDVCGPPPLRAPGLDSLRSRRGLRYVDAALTAWPAFVYDMFDYERMRNIIKAYFDTLMLDALPEGAVSLSYWVASNLTLGARDRLALFAVDDALLRLHLEVRFITQFSRAQKCALCCGSCGGEVAQREHVFPMSSHGVHSNYTNPGGYVHGVVTVTRARAAPGGPPSADYSWFPGYSWTVALCRDCRAHVGWRFDAIKRSLRPQQFYGLCRNYVQPRHHDQDLADY

Uniprot

H9JIF8   A0A212FFT0   A0A437B5T3   A0A2A4K207   A0A2A4K2N0   A0A194RA26   + More
A0A195CE96   F4WYQ7   A0A151JZ65   A0A158N947   A0A026W788   A0A3L8DJ29   E2AK45   A0A151X4N5   A0A182ITC4   A0A336K518   Q17B57   A0A195BVM7   A0A182HD31   A0A084VXM2   A0A2A3EFL3   A0A088A4J1   B0W9N6   A0A210QI98   A0A0N0BFL6   A0A1Q3G4B2   Q17B58   E2C926   W5JFG0   A0A182TGD6   A0A1Q3FA94   A0A182FCZ4   K1QI70   A0A182PJ24   A0A182RQE1   Q17B59   A0A1S4G7L3   Q7QI48   A0A182UW62   A0A182WRZ8   A0A182ICX1   A0A1L8DTY0   A0A182KVW8   A0A182JW43   A0A182QRU2   A0A182MDL1   C3Z2Q1   A0A182NN59   A0A232FDX4   A0A293M3Q0   A0A1L8DTN8   K7IW26   A0A1Z5LGI1   A0A182HD29   A0A182SR45   A0A2R5L7E3   A0A182WK39   T1JIH3   Q4RXV6   H3DAT4   V9KHU4   H2TVC3   G3N6P5   A0A3B5KIU4   A0A3Q4MZ43   A0A3P9P9B6   A0A3P8USH6   A0A131XY44   B7PWV7   A0A3B5MQG3   A0A3B3QYH1   W5MZ09   A0A1B6E425   A0A1W5A8W1   A0A154PMJ9   A7S6W7   A0A3P8TFF6   A0A3B3QXW8   A0A3Q1HNM0   A0A3Q1CAZ9   A0A0L8HQK9   R7TQ36   A0A3Q0TBH3   A0A3Q3QXI8   A0A0L8HQR6   A0A0S7GTZ3   A0A3B3X2F1   A0A3B5QUV4   I3KS87   A0A3Q2CF56   A0A3B4F8U9   A0A3Q2WK80   A0A3P9BQM6  

Pubmed

19121390    22118469    26354079    21719571    21347285    24508170    + More
30249741    20798317    17510324    26483478    24438588    28812685    20920257    23761445    22992520    12364791    14747013    17210077    20966253    18563158    28648823    20075255    28528879    15496914    24402279    21551351    25186727    24487278    29240929    17615350    23254933    23542700   

EMBL

BABH01027277    BABH01027278    BABH01027279    AGBW02008766    OWR52595.1    RSAL01000154    + More
RVE45669.1    NWSH01000219    PCG78277.1    PCG78276.1    KQ460436    KPJ14693.1    KQ977935    KYM98556.1    GL888459    EGI60668.1    KQ981440    KYN41667.1    ADTU01009091    ADTU01009092    ADTU01009093    ADTU01009094    ADTU01009095    KK107364    EZA51920.1    QOIP01000007    RLU20417.1    GL440191    EFN66188.1    KQ982543    KYQ55383.1    UFQS01000100    UFQT01000100    SSW99551.1    SSX19931.1    CH477325    EAT43511.1    KQ976405    KYM91851.1    JXUM01005144    KQ560187    KXJ83934.1    ATLV01018097    KE525212    KFB42716.1    KZ288266    PBC30274.1    DS231865    EDS40355.1    NEDP02003604    OWF48321.1    KQ435800    KOX73264.1    GFDL01000407    JAV34638.1    EAT43510.1    GL453768    EFN75562.1    ADMH02001370    ETN62811.1    GFDL01010617    JAV24428.1    JH817484    EKC30879.1    EAT43509.1    AAAB01008810    EAA04790.4    APCN01006058    GFDF01004339    JAV09745.1    AXCN02001952    AXCM01001616    GG666574    EEN53302.1    NNAY01000393    OXU28688.1    GFWV01010645    MAA35374.1    GFDF01004340    JAV09744.1    GFJQ02000712    JAW06258.1    JXUM01005139    KXJ83932.1    GGLE01001308    MBY05434.1    JH431701    CAAE01014979    CAG06776.1    JW865083    AFO97600.1    GEFM01003867    JAP71929.1    ABJB010035570    DS810469    EEC11079.1    AHAT01031660    GEDC01004633    JAS32665.1    KQ434948    KZC12440.1    DS471342    DS469590    EDO28630.1    EDO40533.1    KQ417510    KOF91521.1    AMQN01002386    KB309044    ELT95677.1    KOF91519.1    GBYX01449383    GBYX01449377    JAO32104.1    AERX01006711   

Proteomes

UP000005204    UP000007151    UP000283053    UP000218220    UP000053240    UP000078542    + More
UP000007755    UP000078541    UP000005205    UP000053097    UP000279307    UP000000311    UP000075809    UP000075880    UP000008820    UP000078540    UP000069940    UP000249989    UP000030765    UP000242457    UP000005203    UP000002320    UP000242188    UP000053105    UP000008237    UP000000673    UP000075902    UP000069272    UP000005408    UP000075885    UP000075900    UP000007062    UP000075903    UP000076407    UP000075840    UP000075882    UP000075881    UP000075886    UP000075883    UP000001554    UP000075884    UP000215335    UP000002358    UP000075901    UP000075920    UP000007303    UP000005226    UP000007635    UP000261580    UP000242638    UP000265120    UP000001555    UP000261380    UP000261540    UP000018468    UP000192224    UP000076502    UP000001593    UP000265080    UP000257200    UP000257160    UP000053454    UP000014760    UP000261340    UP000261600    UP000261480    UP000002852    UP000005207    UP000265020    UP000261460    UP000264840    UP000265160   

PRIDE

H9JIF8   

Pfam

PF03226   Yippee-Mis18        + More
PF02190   LON_substr_bdg
PF17906   HTH_48

Interpro

IPR015947   PUA-like_sf        + More
IPR034750   CULT       
IPR003111   Lon_substr-bd       
IPR004910   Yippee/Mis18/Cereblon       
IPR041426   Mos1_HTH       

SUPFAM

SSF88697   SSF88697       

CDD

cd15777  CRBN_C_like

ProteinModelPortal

H9JIF8   A0A212FFT0   A0A437B5T3   A0A2A4K207   A0A2A4K2N0   A0A194RA26   + More
A0A195CE96   F4WYQ7   A0A151JZ65   A0A158N947   A0A026W788   A0A3L8DJ29   E2AK45   A0A151X4N5   A0A182ITC4   A0A336K518   Q17B57   A0A195BVM7   A0A182HD31   A0A084VXM2   A0A2A3EFL3   A0A088A4J1   B0W9N6   A0A210QI98   A0A0N0BFL6   A0A1Q3G4B2   Q17B58   E2C926   W5JFG0   A0A182TGD6   A0A1Q3FA94   A0A182FCZ4   K1QI70   A0A182PJ24   A0A182RQE1   Q17B59   A0A1S4G7L3   Q7QI48   A0A182UW62   A0A182WRZ8   A0A182ICX1   A0A1L8DTY0   A0A182KVW8   A0A182JW43   A0A182QRU2   A0A182MDL1   C3Z2Q1   A0A182NN59   A0A232FDX4   A0A293M3Q0   A0A1L8DTN8   K7IW26   A0A1Z5LGI1   A0A182HD29   A0A182SR45   A0A2R5L7E3   A0A182WK39   T1JIH3   Q4RXV6   H3DAT4   V9KHU4   H2TVC3   G3N6P5   A0A3B5KIU4   A0A3Q4MZ43   A0A3P9P9B6   A0A3P8USH6   A0A131XY44   B7PWV7   A0A3B5MQG3   A0A3B3QYH1   W5MZ09   A0A1B6E425   A0A1W5A8W1   A0A154PMJ9   A7S6W7   A0A3P8TFF6   A0A3B3QXW8   A0A3Q1HNM0   A0A3Q1CAZ9   A0A0L8HQK9   R7TQ36   A0A3Q0TBH3   A0A3Q3QXI8   A0A0L8HQR6   A0A0S7GTZ3   A0A3B3X2F1   A0A3B5QUV4   I3KS87   A0A3Q2CF56   A0A3B4F8U9   A0A3Q2WK80   A0A3P9BQM6  

PDB

4CI3     E-value=6.68572e-33,     Score=352

KEGG

105841286    K11793 cereblon | (RefSeq) protein cereblon-like

GO

GO:0046872   GO:0008233   GO:0031464   GO:0016567   GO:0004176   GO:0006508   GO:0007018   GO:0008017   GO:0022891   GO:0004812   GO:0006418   GO:0003676   GO:0016876   GO:0043039  

Length:

402

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.04606

Exp number, first 60 AAs:

0.00022

Total prob of N-in:

0.00401

outside

1  -  402

 

 

Pi

197.973886

Theta

173.86379

Tajima's D

-1.014713

CLR

1232.879397

CSRT

0.137443127843608

Interpretation

Uncertain