SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08559  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA009312
Annotation
growth_arrest-specific_protein_2_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.338
 

Sequence

CDS
ATGGCGCTGTATCGGTGCGGGCCGACTGCTCTGGGCAGCCGCACCTCCTGGGGCCCGGTGTCGAGTCCTGAACACAAACCCTTCCCGCGCCCTCTCAGTGGGAACTTTGACAGAATATTCAACGCTTTCGAAAGGACCAACGCCTTCGAGTACGTCCGAAGCAACTTGGACGGCAAGGAGGAGGCTCGCCATGTAGGTCATGCGGATGTAGTGGTGAACAGGAAGATGAGCAGCAGCTACGAAAGAGCCGACTGCGCGCTGGCTGCCCAGGCTCCTTGTGATGACGAAGACTTCTACAGAGAGAAGATCCTGTACTCGCAGGCGAGGCAGCTGTTTCCGCTGCAAGAGGACCTGGCTGACTGGATTAATAAGACTATTGGCATAACATACCTGACCGGAGAGAATTTTCTGGACGTGTTGGACAACGGCGTGGAGCTGTGTCAGCTGGCGAGCGTCATACATGAGCGAGCTCGGGGCGCGCTCGACCAGGGACTCGTTGTGGGGGTGGTGCCACAGATCCGCGGCCGCTGCTGGCAGCGCGCGGCCCGTCGCAGCTTCTTCTCCAGGGACAACACGGAGAACTTCATCACGTTCTGCCGCGAGCTTGGAGTCCACGAGAACCTGCTGTTCGAGAGCGATGACCTCGTTCTCCACAACCAACCCCGCCAAGTGATCCTCTGCCTGTTGGAAGTGGCTAGACTGGCCACCAAGTTCAACATAGAGCCGCCGGGGCTGGTACAGCTAGAGAAGGAGATCGCGATGGAAGAGCGCGACTCCGGCCTCGACTCGGCCATGTCTAGCGCTGCCTGGCAGTTCAGAGACAGCTCGCCCGAACCCGACAAAACTCTGGTTGAAAATTCGGCCCCAACCCCAGATCCAAATGAAAGCCAAGAGTCAGCGGTGGACAACGCCGACGCCGAGAGCACCAAGTCTGAGGGGACGGTGGGCAGCACTGACTCCGATGTGCCGCTCAAACCCACCAATGAACTCGATAAGAGAGTGCAACTCGTGACGCGGCTGATGGAACGCGGCTGCAGCTGTAACTCCGGGAAGTGTTCCAAGCTGCTCAAAGTGAAGAAGGTCGGAGAAGGACGCTACAACATCGCAGGAAGGAATGTCTTCATTCGGTTATTGAAGGGTCGCCACATGATGGTGCGTGTCGGCGGCGGCTGGGACACGCTGGAGCACTTCCTGTCGCGGCATGAACCGTGCCAGGTGCGCCTCGTCACGCAAGGACGCCGCGCATCAGTGCTGCCTGTACCGACCACACCAGCCTCGCCTGTCACACCCGTCACGCCCGGCACGCCCCCCTCACCAGTCACCCCCGCCTCACCCGCCGCGTCTAGCAAGCACAGCAGTGGACGTAGCTCCCCTCTTCCGCCTCCACCGCGGACGTCCACTCCACGACGTCCCGCACTGTCCCTGCCACTACGCTCCACCGCCCCGTCACCCGCCCCCTCGTTATCCCACAGCACGCCCTCCACGCCAATCTCGCGCTCGGTCCGTACTCCACCCGCAGAGTTCCGCAAGTCGTTGACCTCCGCAAACCTGCTCGGAGCGCCCAAGAAGTCCCGCAGCGCCAGCCTCGCGAGTGAAGGCGGTGGTGAGCGGTCCATCCGCAATAAGAAGAAGTCCGTGAACACCGTCGCTGCCTCGCCGGCGCCGCGCAAACTCCGCAGCCAGAGCTTGGTGCCGGCGGCTAGCGGAGCACCGGGCGCGGCGGGGGGTGCGGCGGGGAGCGCGGTGGCGGGCGCGGCGCGGAAGGCTCGCAGTCTCAGCGCGGCGAGCGGCGGCGCCCTCACGCAGGCGGCTATCGAGGAGAGCATCAGACTCTCCCTGGCGGCGAGCATGGTGGACGCAGAGTGCGCCAATAAGCCATTCCTCCACATCAAAGCGAAGTACCGCAGTCCACCGCCACGGGAGGTGCCTCCCAGATAA
Protein
MALYRCGPTALGSRTSWGPVSSPEHKPFPRPLSGNFDRIFNAFERTNAFEYVRSNLDGKEEARHVGHADVVVNRKMSSSYERADCALAAQAPCDDEDFYREKILYSQARQLFPLQEDLADWINKTIGITYLTGENFLDVLDNGVELCQLASVIHERARGALDQGLVVGVVPQIRGRCWQRAARRSFFSRDNTENFITFCRELGVHENLLFESDDLVLHNQPRQVILCLLEVARLATKFNIEPPGLVQLEKEIAMEERDSGLDSAMSSAAWQFRDSSPEPDKTLVENSAPTPDPNESQESAVDNADAESTKSEGTVGSTDSDVPLKPTNELDKRVQLVTRLMERGCSCNSGKCSKLLKVKKVGEGRYNIAGRNVFIRLLKGRHMMVRVGGGWDTLEHFLSRHEPCQVRLVTQGRRASVLPVPTTPASPVTPVTPGTPPSPVTPASPAASSKHSSGRSSPLPPPPRTSTPRRPALSLPLRSTAPSPAPSLSHSTPSTPISRSVRTPPAEFRKSLTSANLLGAPKKSRSASLASEGGGERSIRNKKKSVNTVAASPAPRKLRSQSLVPAASGAPGAAGGAAGSAVAGAARKARSLSAASGGALTQAAIEESIRLSLAASMVDAECANKPFLHIKAKYRSPPPREVPPR

Summary

Pfam
PF00307   CH        + More
PF02187   GAS2
Interpro
IPR003108   GAR_dom        + More
IPR036534   GAR_dom_sf       
IPR001715   CH-domain       
IPR036872   CH_dom_sf       
SUPFAM
SSF47576   SSF47576        + More
SSF143575   SSF143575       
Gene 3D
PDB
1V5R     E-value=1.63514e-09,     Score=152

Ontologies

Topology

Length:
645
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.34803
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00043
outside
1  -  645
 
 

Population Genetic Test Statistics

Pi
209.849535
Theta
170.241937
Tajima's D
0.693159
CLR
0.625856
CSRT
0.568921553922304
Interpretation
Uncertain
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