SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08552  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA009316
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_neurobeachin-like_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.983
 

Sequence

CDS
ATGTTGATATTGTTTCAGGCTGTAGTACTACCGCCGTTGGCGCGGTGGCCGTACGAGAACGGCTTCACGTTCACCACCTGGTTCAGACTGGACCCCATCAACTCCGTCAACATCGAAAGGGAAAAGCCTTATTTGTACTGCTTCAAGACAAGTAAAGGCGTCGGCTACACAGCGCACTTCGTCGGTAACTGCCTCGTGCTTACATCCATGAAGATCCGAGGCAAGGGATTCCAGCACTGCGTGAAATACGAATTTCAACCGAGGAGATGGTATGCCATAGCAGTCGTCTATATATACAATAGATGGACGAAAAGCGAAATCAAGTGTCTAGTGAACGGTCAGCTGGCATCGAGCACTGAGATGGCCTGGTTCGTCTCCACCAATGATCCATTCGACAAGTGCTACATCGGTGCTACAGCTGAATTGGACGAGGAGAGGGTGTTCTGCGGACAGATGGCAGCCATATACCTGTTCGGAGAAGCTCTAACTACTCACCAGATATGCGCCATGCATAGATTAGGGCCCGGATACAAGAGTCAGTTCCGTTTCGACAACGAATGCAACATCAGTTTACCGGAGAACCACAAAAGGGTGTTATACGACGGTAAGCTGTCGTCTGCGATAGTGTTCATGTATAATCCGGTCGCGACGGATGGCCAGCTGTGTCTCCAATCAGCACCCAAGGGCAACGTTTCTTACTTCGTGCACACGCCCCACGCCCTAATGTTACAGGAAGTGAAAGCAGTCGTGACGCATTCGATACACAGCGCTCTGAACTCGATAGGGGGAGTGCAAGTCTTATTTCCGCTGTTTTCTCAACTCGACCTACAGCACGACGCGCCGCCGAACGATCCCAAACGAGATCCCTTGCTATGTTCGAAGCTGCTTGGGTTCGTTTGTTCCTTGGTGGAATCCTGCAGCACGGTTCAGCAACACATGCTGCAGTGTCGCGGGTTCCTCGTGATCTCTCACATGCTGCAGAGGTGCTCCAGAGACCACCTGACGCCTGATACGCTCGCCTCCTTCCTGCATTTAACGAAACATCTTGTAACTTGCTGCTCTCCTAATTCTGATCTGCTATTAAAACAGCTCCTGGACCACATATTGTTCAACCCCGCGCTGTGGATCCACACTCCTGCTGCAGTACAGGCCAGGCTTTACTGCTACTTGGCGACGGATTTCCTCGCTGACGCCCACATATACGGAAGCGTCAGAAGAGTGAGCACGGTCTTGCAGACTGTTCACACGCTGAAGTTCTACTACTGGGTCGTGAACCCGAGGGCCAAAAGTGGAATCGCACCCAAAGGACTCGATGGTCCTCGACCAGCTCACAAAGATATATTAACAATCCGAGCGTACATTTTGTTGTTTTTGAAACAACTGATCATGATCGGGAATGGCGTCAAGGAGGACGAACTGCAATCTATACTCAACTATCTAACTACCATGCACGAGGATGAAAACTTGCATGATGTTCTGCAGATGTTGATCTCATTAATGTCCGAGCACCCCAGCTCCATGGTACCTGCTTTTGACGCGAAAGGCGGAATAAGGACAATATTCAAGCTGTTGGCGTCAGAAAGTCAATTAATAAGGTTACAGGCGCTAAAACTTCTCGGTTTCTTTCTGAGCAGAAGCACGCACAAACGCAAATACGACGTAATGTCGCCACACAACCTGTACACGTTGCTGGCAACCAGACTGGGGGCGAGCGGCGAGGGACTGGCCCTGCCCGTCTACAACGCCCTGTACGAACTCCTCACGGAGCACGTCGGGCAGCAGATACTGTACACCAGCCACCCGGAGCCGCAGCCACACTTCAGACTCGAAAATCCTATGATCCTGAAGGTGGTGGCCACGCTGATAAGGCAGTCGAAGCAAACGGAACAGCTGCTGGAAGTGAAGAAGCTGTTCTTGTCGGACATGACCCTGCTGTGCAGCAACAACCGCGAGAACCGACGCACCGTGCTGCAGATGTCCGTATGGCAGGAATGGCTCATAGCGATGGCTTATATCCACCCAAAGAACGCCGAGGAACAGAAAATCTCTGACATGGTCTACTCGCTGTTCCGGATGCTTCTTCATCACGCCATCAAACATGAATACGGAGGCTGGAGAGTATGGGTGGACACATTAGCCATTGTGCATTCAAAGGTTTCGTACGAAGAATTCAAGTTGCAATTCGCACAAATGTATGAACATTACGAGCAAAGACGAGCTGACAACATCACAGACCCAGCCGAGAGACAACAACGACCCATCTCCACTATATCCGGCTGGGACAGGCACGCCGACACCCAGCACACCCCACGCGTCATCCCGGACACAGACGACAGCATGGACAGCTCTCCCGCGTCCATCAGGAAGCAGAATGTGCTCAATCACGGCGCGCAGACCGAAATCGGAAAAGGGCTCTCGTTGCGAGAAGTCGAATCGTGCAATTGTACCACAGTTAAAGCAGAAAGTGATAAAAGTGAGGAAGAATCCGATCGGACTACACAAGTCGTTTATAGTGAAGTGTGTAAAGTGCATAGTCCCGTTAAAACTGTTGAAGCCGCAGTGCCCTCCGCCGATGGCTGTGATGCTGTGATCCGCGACTCTGAAGTCGAACACGCAATCGATGAAGCCGAGTCTGAGAATGAACAGACAATCTTCAACCCTGCTATACAGTCCAGTAACGAATTAGTAGAATCTATTATAAGTGAAGATACTATTTTGGGCACTGAATCTGGATTAGGGACGTTAGAGAAACCCGAAAAACTCAACCGACAAGGAAGTTTAGATTATATTCCAGTCAGAGATGTAGGCGACACCGTATCTAAAGATGACAACACAGATAAGAGTGAGGGAATACCGTCAAGTTTATCTGTGAGTGAAACAGCTAGTCCCGAGAGAGTAGCGGACTTAAATATCGTTACTGAGAGAGAATCTGAGCTTTCAGATCCATCCGAACTATACTTAACCCCTAGCGAAGCCACCAGCCCAAAGGAAGTTGAGGAAAAAGTTGAAGTTTTAGATGAACCAACAGACGGTATCGACGATCCGAGGCACGTCGCTGTAAACATTGTCAATGACGTACTCAGTGTGGCGCTGGAGACCGTTAGGCTGAAAGCTGACGACGACACCGACTCTGGTGCGATATCCGGCGGATTGCAATCCGAAGGTAACACGCCAAACGGTCGCGATGACTTCGATCAAGAAATCGAAGAAATCGTTAGCGAGAAACAAGCTGCTGAGTCTATAGCTAATGAAATCGTTATGGATATTGTAGAATCTGCATTGGCTAAGGGCGCTGAGAATACTGAACCATCCGAAGAGAATAGCCCGCAAAGGGTGTTACCCTCGGATCATCCTCACGAAGGGAACGTTTTGCCACTAGACGGTGAATTCTTGGTTAGTCCCAGAGAAGAGGATGCTGAAAAACTTGAGGTTGAAGAAGATTCTGAAAAGATTCCTGAAGAAAATATGAACATTGAAATTGAAAATGCCGATACTGAAGAACCAGAGCAACAGAAAACGACGGAAATTCCACCAATCTCGACTATCAGTGAAAACATATCTTTAGCGAACAAGAAAGAACAAGAAACCGATGAAGATAGAGGTAGAGAGGGTGAGAGAGAAAAAAGACGGGTCAGTTTACCCGAAGACAGCGAGAGTAAGCAGGATAGTGCTAGAGGTGAGGGTGTGGCCTCGCACGGTACCAACACGTCATCATCACCCAAAAGGCCTCGAAGTGCGTCCACTAGTACACAAGTGGACTCTAATCATTTTGAATCGAAACGTCCATCGAAATGCTCCAGACCTATGTTCTCCCCGGGACCCACTCGCCCCCCGTTCCGCATCCCCGAGTTCCGCTGGTCCTACATCCACCAGAGGCTGCTGTCGGATGTGTTATTCTCATTGGAAACTGATATTCAGGTTTGGCGAAGTCATTCCACTAAATCTGTCATAGACTTCGTCAATAGCAGCGAGAACGCCATCTTTGTCGTGAATACCGTACACCTGATCAGTCAGTTGGCCGACAATCTGATCATCGCTTGTGGAGGGCTCCTGCCGCTCCTAGCGTCGGCCACGTCACCCAATAACGAGCTCGATGTCATCGAACCGACCCAGGGTATGCCGGTGGAGGTGGCTGTGACCTTTCTACAGCGACTGGTCAGCATGGCGGACGTTTTGATATTTGCAAGCGCCCTTAACTTTGCCGAGCTGGAGGCTGAGAAGAATATGTCCAGTGGCGGTATCCTGAGGCAGTGTCTCCGACTTGTGTGCACGTGTGCGGTGCGCAATTGCCTCGAGTGCAAGGAGCGCCAGCGGTACGCCGCCGCCAGGGCTGCACGTGCCGGAGACTCGCCCTCGCCGAAGAGCGTCGTGGCGAGTCTTGCGGACGCCTCCAGCCCCGTCAAAGATCCGGAAAGGCTTCTGCAGGACATGGACGTCAATCGACTTCGAGCTGTTATCTACAGGGATGTTGAGGAGACGAAACAAGCGCAGTTCTTGTCGCTTGCCATCGTTTATTTCATCTCGGTACTGATGGTTTCGAAGTACCGCGACATCTTGGAGCCGCCCGCCCACGCGCCTCCGGAATGTTCCAGAAGACCGCACCACTCCCACGAGCATCACGGGTCTAGGCCTCTGTTCCCCCAGTGGTCGCACCACGTGTACCCGCAGTTCCTGCCGGGTGGGCATCCCGCTCACCGACATCCACACTCGCACTGCAAGCTCGACTGCAGCCAACACGTTAACAATAACACGCACGCACACTCACGCATCGCTAGTTACCACCGCACACACGCAGAACACAACGGGGATGATGTGGAATACGCCATGATTGTTGTTGACGAGAACAATTCTACAATAAACGAATTAGATTCACCATCGATGAAGGAGTCGGAAGCCAAGGAAGATGCTGTGGCAAAAATAGAAACAACGGCCATAGAATTGAAGCCGCCGTCTCCGGAACAGCCCGAGCTGAGTAAGCCGGCTGAGACGCCCACCCCAGAAAAGGAAGAACCGCTTTTCAAGTCGAGCCTCCGAGTGAAACCGCAGCCCAAAATAAAGAGCGTGGATTCGATCGAAGACGCCGGCTCGTTTCATCTCAACTCTAATGAGACTACTAACAATGATCCTGAGACCTCCAGCGAGATCGCTCTAGATGATAACAAACACGCGGCCAGTAATGACGAATCTTGGACCGATGTCAACTTGAATGAAGAGGGTGAAAGGGGTCCGGCCACCATTACTGGGAGAACGAGAGACCACGAAGGGAACATTCATGAAGATATCGACAAACAAATTCATATGAGGAATACAGATTCACATCACCACATTCAACAACGACAGAACAGAAACCTTCAGGCTGCACAACGGCATTTACATCCGGACAATGAGACCCTGGCTGGTCTAAATGCAATGAACGCTTCGATGTCCGCCGACGGAGTGTCCCGGGAAGCCTCTCTGACCCACAAGCTTGAGACAGCCCTGGGCCCTGTCTGTCCGCTTTTGAGAGAGATAATGCTAGATTTTGCTCCTTTCCTTTCTAAAACCCTGGTAGGAAGCCACGGACAGGAGCTCCTGATGGAGGGTAAAGGTCTCCAAACATTTAAATCCAGCACTTCGGTAGTGGAACTCGTGATGTTGCTCTGCTCGCAAGAGTGGCAGAACTCCCTCCAGAAGCACGCCGGCCTCGCCTTCATCGAGCTCATCAACGAGGGACGGTTACTGTCCCACGCCATGAGGGACCACATTGTCCGCGTTGCGAACGAAGCTGAGTTCATCCTCAACAGAATGAGAGCTGACGATGTTTTGAAACACGCCGATTTTGAGTGCCTTTGCGCCACGAGTAGCGCGGAGCGAGCTGACGAGGAGCGGACCTGTGAGCGGCTGATCGCGGCGGCGAGGAGGAGAGACACCGCGGCCGCCGCCCGCCTGCTGGACAAGCTCCGCCACGCTGCAGCACACCAGGCCGGGACCGGCACGCAGTTCTGGAAGCTAGACTCGTGGGAGGACGATGCCCGGCGCCGGAGGAGACTGGTGCCCGACCCACGCGGACACCGACACGACGACGCCGTGCTCGTGCGCCAACACGCGCAGCCGCCGCCCCACGACGCCATCCTCCAGGTCAGCACGCTCTGCAACGCCGCGCTACATCTACCGCCAGGGGATAATGGGCTCCTGGTTGAAGAGTGCCACCCAACATTCTAA
Protein
MLILFQAVVLPPLARWPYENGFTFTTWFRLDPINSVNIEREKPYLYCFKTSKGVGYTAHFVGNCLVLTSMKIRGKGFQHCVKYEFQPRRWYAIAVVYIYNRWTKSEIKCLVNGQLASSTEMAWFVSTNDPFDKCYIGATAELDEERVFCGQMAAIYLFGEALTTHQICAMHRLGPGYKSQFRFDNECNISLPENHKRVLYDGKLSSAIVFMYNPVATDGQLCLQSAPKGNVSYFVHTPHALMLQEVKAVVTHSIHSALNSIGGVQVLFPLFSQLDLQHDAPPNDPKRDPLLCSKLLGFVCSLVESCSTVQQHMLQCRGFLVISHMLQRCSRDHLTPDTLASFLHLTKHLVTCCSPNSDLLLKQLLDHILFNPALWIHTPAAVQARLYCYLATDFLADAHIYGSVRRVSTVLQTVHTLKFYYWVVNPRAKSGIAPKGLDGPRPAHKDILTIRAYILLFLKQLIMIGNGVKEDELQSILNYLTTMHEDENLHDVLQMLISLMSEHPSSMVPAFDAKGGIRTIFKLLASESQLIRLQALKLLGFFLSRSTHKRKYDVMSPHNLYTLLATRLGASGEGLALPVYNALYELLTEHVGQQILYTSHPEPQPHFRLENPMILKVVATLIRQSKQTEQLLEVKKLFLSDMTLLCSNNRENRRTVLQMSVWQEWLIAMAYIHPKNAEEQKISDMVYSLFRMLLHHAIKHEYGGWRVWVDTLAIVHSKVSYEEFKLQFAQMYEHYEQRRADNITDPAERQQRPISTISGWDRHADTQHTPRVIPDTDDSMDSSPASIRKQNVLNHGAQTEIGKGLSLREVESCNCTTVKAESDKSEEESDRTTQVVYSEVCKVHSPVKTVEAAVPSADGCDAVIRDSEVEHAIDEAESENEQTIFNPAIQSSNELVESIISEDTILGTESGLGTLEKPEKLNRQGSLDYIPVRDVGDTVSKDDNTDKSEGIPSSLSVSETASPERVADLNIVTERESELSDPSELYLTPSEATSPKEVEEKVEVLDEPTDGIDDPRHVAVNIVNDVLSVALETVRLKADDDTDSGAISGGLQSEGNTPNGRDDFDQEIEEIVSEKQAAESIANEIVMDIVESALAKGAENTEPSEENSPQRVLPSDHPHEGNVLPLDGEFLVSPREEDAEKLEVEEDSEKIPEENMNIEIENADTEEPEQQKTTEIPPISTISENISLANKKEQETDEDRGREGEREKRRVSLPEDSESKQDSARGEGVASHGTNTSSSPKRPRSASTSTQVDSNHFESKRPSKCSRPMFSPGPTRPPFRIPEFRWSYIHQRLLSDVLFSLETDIQVWRSHSTKSVIDFVNSSENAIFVVNTVHLISQLADNLIIACGGLLPLLASATSPNNELDVIEPTQGMPVEVAVTFLQRLVSMADVLIFASALNFAELEAEKNMSSGGILRQCLRLVCTCAVRNCLECKERQRYAAARAARAGDSPSPKSVVASLADASSPVKDPERLLQDMDVNRLRAVIYRDVEETKQAQFLSLAIVYFISVLMVSKYRDILEPPAHAPPECSRRPHHSHEHHGSRPLFPQWSHHVYPQFLPGGHPAHRHPHSHCKLDCSQHVNNNTHAHSRIASYHRTHAEHNGDDVEYAMIVVDENNSTINELDSPSMKESEAKEDAVAKIETTAIELKPPSPEQPELSKPAETPTPEKEEPLFKSSLRVKPQPKIKSVDSIEDAGSFHLNSNETTNNDPETSSEIALDDNKHAASNDESWTDVNLNEEGERGPATITGRTRDHEGNIHEDIDKQIHMRNTDSHHHIQQRQNRNLQAAQRHLHPDNETLAGLNAMNASMSADGVSREASLTHKLETALGPVCPLLREIMLDFAPFLSKTLVGSHGQELLMEGKGLQTFKSSTSVVELVMLLCSQEWQNSLQKHAGLAFIELINEGRLLSHAMRDHIVRVANEAEFILNRMRADDVLKHADFECLCATSSAERADEERTCERLIAAARRRDTAAAARLLDKLRHAAAHQAGTGTQFWKLDSWEDDARRRRRLVPDPRGHRHDDAVLVRQHAQPPPHDAILQVSTLCNAALHLPPGDNGLLVEECHPTF

Summary

Pfam
PF15787   DUF4704        + More
PF06469   DUF1088
Interpro
IPR023362   PH-BEACH_dom        + More
IPR016024   ARM-type_fold       
IPR010508   DUF1088       
IPR031570   DUF4704       
IPR013320   ConA-like_dom_sf       
SUPFAM
SSF48371   SSF48371        + More
SSF49899   SSF49899       

Ontologies

Topology

Length:
2066
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0568399999999999
Exp number, first 60 AAs:
0.00904
Total prob of N-in:
0.00090
outside
1  -  2066
 
 

Population Genetic Test Statistics

Pi
220.807861
Theta
178.720159
Tajima's D
0.828431
CLR
0.359576
CSRT
0.610669466526674
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
27530593 RPSSSAGRPSSPLSPTRQ 100.00 5e-05
26822097 HADFECICATSSAER 100.00 0.005
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