SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08549
Pre Gene Modal
BGIBMGA009377
Annotation
Protein_mab-21_[Papilio_machaon]
Full name
Protein mab-21      
Location in the cell
Nuclear   Reliability : 2.361
 

Sequence

CDS
ATGCTCGTTCCCCCAGAGATGATGGCGGCCCAATCTAAACTAGTCTATCAAATGAATAAGTTCTACAACGAGAGAGTCGCCAACAGGAAGGCGCAAATAACAAAAACGATACATGAAGTGTGTCGGATAGTGCAAGATGTACTCAAGGAGGTGGAGTTGCAGGAGCCGAGGTTCATATCCTCTCTCACCGACTACAACGGCAGGTTCGACGGCCTCGAAGTGGTCTCGCCCCACGAGTTCGAGATCGTCATCTATCTCAATCAAATGGGAGTGCTGAACTTCGTGGACGACGGCTCGCTCCCAGGATGCGCCGTCTTGAAACTGAGCGACGGGAGGAAGCGTTCCATGTCCCTCTGGGTCGAGTTCATCACCGCTTCGGGATACCTATCGGCGCGCAAGATACGGTCGCGCTTCCAAACGTTGGTAGCTCAGGCCTGTGACAAGTGCTCGTATAGAGATTGCGTGAAAATGATCGCGGAAACGACCGAAGTCAAGTTGCGAATTCGTGAAAGGTACATAGTGCAAATAACCCCGGCGTTCAAGTGCGCCGGCCTGTGGCCGCGGTCCGCCGCACACTGGCCCCTCCCGGCGATACCCTGGCCGCATCCCAATATAATCGCCGAAGTTAAAACGGAAGGTTTCGATTTATTATCAAAGGAATGCCTCGCGTTGCAAGGGAAAAACTCCGCGATGGAGGGAGACGCTTGGGTGCTGAGCTTCCTAGAGGCGGAGAACCGTTTGCTGCAAGGCGGATGTCGGCGGAAATGTCTGAGCATACTGAAAACAATAAGAGACCGCCACTTGGACTTGCCGGGTAACCCGGTGACGTGTTATCACATGAAGACGTTGTTGTTGTACGAGTGCGAGAAACACCCGCGGGAGCACGAGTGGGACGAGGCCGCCATCGGCGACCGGATCAACGGGATCTTCCTGCAGCTGATATCCTCGCTCCAGTGCCGCCGCTGCCCCCACTACTTCCTGCCGCACGTAGACCTCTTCAAGGGCAAGTCGCCGACGGCGCTGGAGAACGCGGCCAAACAAGTTTGGAGGCTGACCAGAGAGATGCTCACTAATTCCAGAGCCTTCGAGAAGCTGTGA
Protein
MLVPPEMMAAQSKLVYQMNKFYNERVANRKAQITKTIHEVCRIVQDVLKEVELQEPRFISSLTDYNGRFDGLEVVSPHEFEIVIYLNQMGVLNFVDDGSLPGCAVLKLSDGRKRSMSLWVEFITASGYLSARKIRSRFQTLVAQACDKCSYRDCVKMIAETTEVKLRIRERYIVQITPAFKCAGLWPRSAAHWPLPAIPWPHPNIIAEVKTEGFDLLSKECLALQGKNSAMEGDAWVLSFLEAENRLLQGGCRRKCLSILKTIRDRHLDLPGNPVTCYHMKTLLLYECEKHPREHEWDEAAIGDRINGIFLQLISSLQCRRCPHYFLPHVDLFKGKSPTALENAAKQVWRLTREMLTNSRAFEKL

Summary

Similarity
Belongs to the mab-21 family.
Keywords
Complete proteome   Reference proteome   Nucleus  
Feature
chain  Protein mab-21
EMBL
BABH01027235    KQ460817    KPJ12120.1    JTDY01001813    KOB72808.1    NWSH01002199    + More
PCG68926.1    ODYU01006172    SOQ47795.1    KQ459337    KPJ01366.1    AK403846    BAM19975.1    AGBW02006209    OWR55228.1    APGK01025835    KB740604    KB631806    ENN80077.1    ERL86289.1    KQ971338    EFA02253.2    APGK01025832    BT127479    AEE62441.1    ENN80075.1    AAZX01003751    AAAB01008811    CH477486    GBYB01013252    JAG83019.1    AXCM01003396    AXCN02002431    ATLV01023313    KE525342    KFB48871.1    AXCP01004560    APCN01004817    KQ435066    KZC14373.1    KQ414648    KOC66216.1    KR000001    KZ288190    ALC76681.1    PBC34535.1    KQ979592    KYN20598.1    KQ977791    KYM99926.1    GL764458    EFZ17632.1    GL888187    EGI65495.1    ADTU01009513    GL441439    EFN64835.1    DS232312    EDS39800.1    CVRI01000057    CRL02005.1    LBMM01002929    KMQ94168.1    GL448943    EFN83579.1    GBXI01012898    JAD01394.1    KQ982093    KYQ60059.1    GDHF01031664    GDHF01007605    JAI20650.1    JAI44709.1    GAMC01010099    JAB96456.1    CH940664    EDW62982.1    CH933810    EDW06700.1    OUUW01000003    SPP77758.1    CH479200    EDW29695.1    CM000162    EDX02447.1    CP012528    ALC48881.1    CH902632    EDV32587.1    JRES01001377    KNC23271.1    CH954180    EDV45971.1    CH916371    EDV91837.1    CH379064    ERL86288.1    LNIX01000006    OXA52646.1    JXJN01008142    ENN80074.1    ENN80076.1    CCAG010003652    UFQT01000107    SSX20100.1    CH963851    EDW75372.1    AF214524    AE014298    AY128466    KK107214    QOIP01000005    EZA55240.1    RLU22882.1    JH431846    KQ976476    KYM83840.1    GBBI01002186    JAC16526.1    ACPB03011223    GBHO01036279    JAG07325.1    GBRD01016712    GDHC01012116    JAG49115.1    JAQ06513.1    KK114112    KFM61721.1    RLU22982.1    GBXI01014687    GBXI01001900    JAC99604.1    JAD12392.1    MWRG01000236    PRD36670.1    ABJB010035984    DS749722    EEC07996.1    GEZM01095637    JAV55374.1    MWRG01001883    PRD33472.1    EFA02252.1    AJVK01002635    AJVK01002636    KK122168    KFM82120.1    GGMR01015846    MBY28465.1    GDIP01139942    LRGB01002190    JAL63772.1    KZS08637.1    EZA55241.1    HACA01008247    CDW25608.1    ABLF02025882    ABLF02025883    KK852567    KDR21231.1    PYGN01001321    PSN35690.1    NEVH01024529    PNF17002.1   
Pfam
PF03281   Mab-21
Interpro
IPR024810   Mab-21_dom        + More
IPR000772   Ricin_B_lectin       
PDB
5EOM     E-value=2.40103e-170,     Score=1537

Ontologies

Topology

Subcellular location
Nucleus  
Length:
365
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00977999999999999
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00293
outside
1  -  365
 
 

Population Genetic Test Statistics

Pi
130.242842
Theta
163.043153
Tajima's D
-0.933119
CLR
878.488355
CSRT
0.156442177891105
Interpretation
Uncertain
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