Gene

KWMTBOMO08545

Pre Gene Modal

BGIBMGA009376

Annotation

PREDICTED:_LOW_QUALITY_PROTEIN:_facilitated_trehalose_transporter_Tret1-2_homolog_[Bombyx_mori]

Location

Bomo_Chr14(+):12618603-12626924      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.981

CDS

ATGAGTATTGGACTCCCTACATCAGTTGCGGGGGCGTTAATGCTGAGAATCGTTGTGGGGGTGTTGGCGGCCCTTGCCGCGCAATCTATCAACATATCGGTGGGTTTCTGTCAGGGCTTCTCGGCGGTTCTGCTGCCCCAGTACTCGCTTGAGTATCCGTCCATATCGTACGAACAGAGCTCATGGATTGCAAGTCTGGGTGTGATCTCCAACCCCATTGGAGCGCTGCTGGGCGGCATGATGGTGGACGCAGTGGGGCGGCGGCTGCTGTTGCAGTCGATCGTGCTGCCGAACCTCATAGGCTGGCTGGTCATAGCCTTCTCAGAGACCTACGTCTTCCTCTGCATAGGACGATTCATCACCGGATTCACTATCGGAATGTCAACGGTATCGTACATCTACGTGGCTGAGATCACGACTCCAGAAAAGAGAGGGGTTCTCAGCGCTTTAGGGCCCGGCCTGGTCTCCACCGGGATATTCATCGTCTACTCCTTAGGAGCCTTCATTCACTGGCGAAAAGTGGCCGCTATTTGTGCGGGAGTGTCTCTACTGACTCCCTTCTTGATGTACTTCGTTCCAGAGTCACCTCTGTGGCTCGCCTCTAAAGGACAAATGAAAGAAGCTTACAACGCTATGTTCTGGCTCCGTCAGAACAACAGCACGGCGCAACAAGAACTCATGGAGTTCACCAAAGACCGCAAGGAACAGCAGATGAACTTCAAACAGAAATTAGCACTCTTCAAACGGAAAAACGTCCTCAAGCCCTTCGTATTATTAATAGTTTTCTTCATCTTCCAAGAAATGTCAGGGATTTACATCATATTGTATTACGCTGTGGATTTCTTCAAGTCTGTAGGTACTAGCGTCAACGAGTTCACGGCTTCCATCATAGTGGGAGGTGTGAGAGTCTTCATGGGAGCAGTCGGCGCTTGTCTTATTAACAGCTTCAGAAGGAAGACCCTGGCAGCAGTATCAGGACTGCTGCTGGGCATCGCCATGCTGGGGGCCGCGGTGTGCGACAGTCTCAATGGACCTCCGCTAGTGAAGCTCGGCTGTGTGCTATTACACGTTTCCTTCAGCATGGTCGGCTTCCTCCAACTGCCCTGGATCATGTCCGGAGAACTGTACCCTCAGGATATCAGAGGAGTCATGTCCGGGGCGACTTCGTGCTGCGCTTACGTCCTCATTTTCTTCAACATAAAAACGTATCCTAAATTGGAGAACTTACTCACGAGCAACGGGACTTTGTATTTGTTCGGGTTCTGTGCAATGATAGGAGCGGCATACTGCTTCCTGTTTCTGCCGGAGACTAAAGGGAAGACTCTCACGGAAATCATGAGGCAGTTCGACGATGATAACAAAAATGAGAAAGATCTTGAAGCCGGCTACAAGAGCGATAAGGGATGCAGTATCGAGGGCAGGCCAGTGCAGAGGAGACACAGCGCTGGAGCCGCTGTTTCTTTAGAAAAGAGCGAAGACTTTAAGCTTTGGAAGCCAGAAGAGTCGAATAAAACGGACACTCATTGTGATTGA

Protein

MSIGLPTSVAGALMLRIVVGVLAALAAQSINISVGFCQGFSAVLLPQYSLEYPSISYEQSSWIASLGVISNPIGALLGGMMVDAVGRRLLLQSIVLPNLIGWLVIAFSETYVFLCIGRFITGFTIGMSTVSYIYVAEITTPEKRGVLSALGPGLVSTGIFIVYSLGAFIHWRKVAAICAGVSLLTPFLMYFVPESPLWLASKGQMKEAYNAMFWLRQNNSTAQQELMEFTKDRKEQQMNFKQKLALFKRKNVLKPFVLLIVFFIFQEMSGIYIILYYAVDFFKSVGTSVNEFTASIIVGGVRVFMGAVGACLINSFRRKTLAAVSGLLLGIAMLGAAVCDSLNGPPLVKLGCVLLHVSFSMVGFLQLPWIMSGELYPQDIRGVMSGATSCCAYVLIFFNIKTYPKLENLLTSNGTLYLFGFCAMIGAAYCFLFLPETKGKTLTEIMRQFDDDNKNEKDLEAGYKSDKGCSIEGRPVQRRHSAGAAVSLEKSEDFKLWKPEESNKTDTHCD

Similarity

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.

Uniprot

A0A2H1W435   A0A212FNG2   A0A2A4JB59   H9JIM6   A0A0N0PBS7   A0A194Q762   + More
A0A0L7LMY4   A0A067R1A9   A0A2J7PH27   A0A2A3E7T1   A0A158P3D9   A0A195DNA9   E2BQ52   A0A1B6KFT6   A0A1B6M773   J9JJ40   E9IPE9   A0A2S2NAW7   A0A087ZSF6   A0A2H8TJ96   A0A146LNZ1   A0A0C9RG22   A0A0A9X982   A0A0A8J8M8   T1I6V7   A0A0J7L5D2   A0A3L8DR99   A0A310SL43   A0A1B6DNR0   A0A2P8YWI6   A0A0L7RCT5   D2A4W4   A0A154P3W1   A0A1B6BY83   E2AUM5   A0A2R7VTA9   A0A3Q0J6J4   E0VSU5   T1IBF1   A0A0A8J7H4   A0A1Q3FZS3   A0A1B6LM35   A0A1B6LRS5   A0A1B6FBR5   A0A1Q3FZR1   A0A084WU29   A0A2S2QED2   A0A069DUH3   A0A1B6J8E0   Q7Q1K3   A0A182IKM6   A0A1S4H1Y8   A0A023F0Y2   A0A182F0X3   A0A2M4BK99   A0A0V0G9E5   T1I7D1   A0A182V1G2   A0A182KU30   A0A182HRX4   A0A182XN87   A0A2M4CS35   A0A2C9GLD0   A0A182M3T9   Q16TA1   A0A182Y0N5   A0A182NBR2   A0A182JYR6   A0A182WGI8   A0A182T850   A0A182PZC7   A0A182TTM5   Q7QJU9   A0A182I3T0   A0A182WIV2   A0A182PQ17   A0A182FCR5   A0A182X6H8   A0A182KRX2   A0A182UPZ6   A0A026VZD3   A0A182R3T4   A0A154P1X7   A0A182GVD4   A0A3L8DT23   A0A0T6AWG8   A0A2J7RF80   A0A3Q0INK6   A0A2R7VRY9   E9ICR4   A0A1S4EC87   A0A1Y0AWP3   A0A182J2R0   A0A1Y0AWP4  

Pubmed

22118469    19121390    26354079    26227816    24845553    21347285    + More
20798317    21282665    26823975    25401762    30249741    29403074    18362917    19820115    20566863    24438588    26334808    12364791    25474469    20966253    17510324    25244985    14747013    17210077    24508170    26483478    28341416   

EMBL

ODYU01006172    SOQ47793.1    AGBW02006209    OWR55230.1    NWSH01002199    PCG68928.1    + More
BABH01027231    KQ460817    KPJ12122.1    KQ459337    KPJ01368.1    JTDY01000523    KOB76807.1    KK852817    KDR15737.1    NEVH01025154    PNF15629.1    KZ288340    PBC27750.1    ADTU01007656    KQ980713    KYN14358.1    GL449698    EFN82171.1    GEBQ01029692    JAT10285.1    GEBQ01008190    JAT31787.1    ABLF02018355    GL764503    EFZ17558.1    GGMR01001742    MBY14361.1    GFXV01002380    MBW14185.1    GDHC01010282    GDHC01003621    JAQ08347.1    JAQ15008.1    GBYB01007274    GBYB01007275    JAG77041.1    JAG77042.1    GBHO01028221    JAG15383.1    AB901064    BAQ02364.1    ACPB03010141    LBMM01000704    KMQ97694.1    QOIP01000005    RLU22921.1    KQ764883    OAD54259.1    GEDC01017793    GEDC01009990    JAS19505.1    JAS27308.1    PYGN01000318    PSN48610.1    KQ414615    KOC68663.1    KQ971344    EFA05276.2    KQ434796    KZC05820.1    GEDC01031065    GEDC01025950    JAS06233.1    JAS11348.1    GL442829    EFN62872.1    KK854065    PTY10579.1    DS235758    EEB16451.1    ACPB03005679    AB901070    BAQ02370.1    GFDL01001987    JAV33058.1    GEBQ01015348    JAT24629.1    GEBQ01013595    JAT26382.1    GECZ01022112    JAS47657.1    GFDL01001990    JAV33055.1    ATLV01026995    KE525421    KFB53723.1    GGMS01006902    MBY76105.1    GBGD01001284    JAC87605.1    GECU01012268    JAS95438.1    AAAB01008980    EAA14209.4    GBBI01004041    JAC14671.1    GGFJ01004336    MBW53477.1    GECL01001732    JAP04392.1    ACPB03015438    ACPB03015439    APCN01001774    GGFL01003976    MBW68154.1    AXCM01001091    CH477657    EAT37688.1    AXCN02000684    AAAB01008807    EAA04222.4    APCN01000220    KK107538    EZA49138.1    KZC05843.1    JXUM01090735    KQ563861    KXJ73152.1    RLU22918.1    LJIG01022656    KRT79410.1    NEVH01004413    PNF39494.1    KK854045    PTY10206.1    GL762354    EFZ21649.1    KY921826    ART29415.1    KY921829    ART29418.1   

Proteomes

UP000007151    UP000218220    UP000005204    UP000053240    UP000053268    UP000037510    + More
UP000027135    UP000235965    UP000242457    UP000005205    UP000078492    UP000008237    UP000007819    UP000005203    UP000015103    UP000036403    UP000279307    UP000245037    UP000053825    UP000007266    UP000076502    UP000000311    UP000079169    UP000009046    UP000030765    UP000007062    UP000075880    UP000069272    UP000075903    UP000075882    UP000075840    UP000076407    UP000075883    UP000008820    UP000076408    UP000075884    UP000075881    UP000075920    UP000075901    UP000075886    UP000075902    UP000075885    UP000053097    UP000075900    UP000069940    UP000249989   

PRIDE

H9JIM6   

Pfam

PF00083   Sugar_tr

Interpro

IPR003663   Sugar/inositol_transpt        + More
IPR005828   MFS_sugar_transport-like       
IPR036259   MFS_trans_sf       
IPR005829   Sugar_transporter_CS       
IPR020846   MFS_dom       

SUPFAM

SSF103473   SSF103473       

CDD

cd06174  MFS

ProteinModelPortal

A0A2H1W435   A0A212FNG2   A0A2A4JB59   H9JIM6   A0A0N0PBS7   A0A194Q762   + More
A0A0L7LMY4   A0A067R1A9   A0A2J7PH27   A0A2A3E7T1   A0A158P3D9   A0A195DNA9   E2BQ52   A0A1B6KFT6   A0A1B6M773   J9JJ40   E9IPE9   A0A2S2NAW7   A0A087ZSF6   A0A2H8TJ96   A0A146LNZ1   A0A0C9RG22   A0A0A9X982   A0A0A8J8M8   T1I6V7   A0A0J7L5D2   A0A3L8DR99   A0A310SL43   A0A1B6DNR0   A0A2P8YWI6   A0A0L7RCT5   D2A4W4   A0A154P3W1   A0A1B6BY83   E2AUM5   A0A2R7VTA9   A0A3Q0J6J4   E0VSU5   T1IBF1   A0A0A8J7H4   A0A1Q3FZS3   A0A1B6LM35   A0A1B6LRS5   A0A1B6FBR5   A0A1Q3FZR1   A0A084WU29   A0A2S2QED2   A0A069DUH3   A0A1B6J8E0   Q7Q1K3   A0A182IKM6   A0A1S4H1Y8   A0A023F0Y2   A0A182F0X3   A0A2M4BK99   A0A0V0G9E5   T1I7D1   A0A182V1G2   A0A182KU30   A0A182HRX4   A0A182XN87   A0A2M4CS35   A0A2C9GLD0   A0A182M3T9   Q16TA1   A0A182Y0N5   A0A182NBR2   A0A182JYR6   A0A182WGI8   A0A182T850   A0A182PZC7   A0A182TTM5   Q7QJU9   A0A182I3T0   A0A182WIV2   A0A182PQ17   A0A182FCR5   A0A182X6H8   A0A182KRX2   A0A182UPZ6   A0A026VZD3   A0A182R3T4   A0A154P1X7   A0A182GVD4   A0A3L8DT23   A0A0T6AWG8   A0A2J7RF80   A0A3Q0INK6   A0A2R7VRY9   E9ICR4   A0A1S4EC87   A0A1Y0AWP3   A0A182J2R0   A0A1Y0AWP4  

PDB

4LDS     E-value=1.44872e-27,     Score=307

KEGG

101744355    K08145 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member

GO

GO:0016021   GO:0022857   GO:0008643   GO:0005351   GO:0005887   GO:0005215   GO:0016020   GO:0022891   GO:0004812   GO:0006418   GO:0003676   GO:0016876   GO:0043039   GO:0055085  

SignalP

Position:   1 - 26,         Likelihood:  0.523206

 

 

Length:

510

Number of predicted TMHs:

12

Exp number of AAs in TMHs:

253.68615

Exp number, first 60 AAs:

25.32108

Total prob of N-in:

0.80945

POSSIBLE N-term signal

sequence

inside

1  -  12

TMhelix

13  -  35

outside

36  -  59

TMhelix

60  -  82

inside

83  -  88

TMhelix

89  -  106

outside

107  -  115

TMhelix

116  -  138

inside

139  -  144

TMhelix

145  -  167

outside

168  -  176

TMhelix

177  -  199

inside

200  -  256

TMhelix

257  -  279

outside

280  -  293

TMhelix

294  -  316

inside

317  -  320

TMhelix

321  -  338

outside

339  -  352

TMhelix

353  -  375

inside

376  -  381

TMhelix

382  -  400

outside

401  -  414

TMhelix

415  -  434

inside

435  -  510

 

 

Pi

229.012406

Theta

195.219863

Tajima's D

0.512081

CLR

0.352705

CSRT

0.523473826308685

Interpretation

Uncertain