SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08542  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA009375
Annotation
PREDICTED:_Krueppel_homolog_2_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 4.913
 

Sequence

CDS
ATGGCCGATCAAAATCAGCAAGCAGGCGACACTGGTCCACCAAAAGGCATCCCAGCCTTGAAAGCTCACATCATTGCCAATAAAATAGACGTAGCTCTTTGGGGGGTCCGCGTAATCACCGTGCTGTGTACCATTGGATACGTGTTCCCATTGTTTAACAATCCAGTGTCGGCATTCTACAAAGCGTTACTCGCGAACGCTGCGACTTCAGCGCTGCGGCTACATCAAAGAATTCCAGCACGAGAGATCTCCCTCTCGCGGGATTTCATGGCGAGGTTCTTCCTGGAGGACAGCGCTCACTATTTATTCTATTCACTCATTTTCATGAACGTCGTGCCCAATTTGTTAATATTGGTGCCAATCTTTTTATTTGCGCTGCTACACGCCGCTTCGTATTCCTTGACTATCCTTGATACTCTTGGTCAAAATTCGTTGTGGGTGGCTCGTCTGCTCATCTCCCTGGTCGAGTTCCAGTCGCGGAACATCCTCCGGGCCGCGGCGCTCGCCGAGATCGTGCTGTTCCCGGTCGTACTCATCATGGCATTGTTCGGTCACTGCGGCTTGATGAGTCCGTTCGTATACTACTACTTCGTGACGTGGAGGTACGCGTCGCGCCGGAACCCGTACACCCGCAACACGTTCCGCGAGCTCCGCGTGGCCGCCGACGGACTCACGCAGCGCCCCTGGGTGCCCGCCGCCCTCGCCTCCGCGCTGCGCTCCGCCATCGACATCGTGTGCCGCATGGCGCCGCCCGTCGAGCAACAACAACAGTAA
Protein
MADQNQQAGDTGPPKGIPALKAHIIANKIDVALWGVRVITVLCTIGYVFPLFNNPVSAFYKALLANAATSALRLHQRIPAREISLSRDFMARFFLEDSAHYLFYSLIFMNVVPNLLILVPIFLFALLHAASYSLTILDTLGQNSLWVARLLISLVEFQSRNILRAAALAEIVLFPVVLIMALFGHCGLMSPFVYYYFVTWRYASRRNPYTRNTFRELRVAADGLTQRPWVPAALASALRSAIDIVCRMAPPVEQQQQ

Summary

EMBL
ODYU01010995    SOQ56458.1    RSAL01000024    RVE52216.1    GAIX01006247    JAA86313.1    + More
KQ459337    KPJ01371.1    AGBW02006209    OWR55234.1    GDQN01006374    GDQN01002465    JAT84680.1    JAT88589.1    AJWK01026310    KK852773    KDR16814.1    GFDF01011106    JAV02978.1    GANO01002740    JAB57131.1    GFDF01011107    JAV02977.1    JXUM01025941    JXUM01025942    JXUM01025943    JXUM01025944    JXUM01025945    GAPW01003552    KQ560739    JAC10046.1    KXJ81061.1    GDUN01000189    JAN95730.1    GECU01002938    JAT04769.1    NEVH01007822    PNF35327.1    UFQS01000300    UFQT01000300    SSX02605.1    SSX22979.1    DS232103    EDS34897.1    GEBQ01000649    JAT39328.1    GFDL01008376    JAV26669.1    GFDL01008374    JAV26671.1    ABLF02023040    PYGN01001295    PSN35929.1    GALA01000933    JAA93919.1    GALA01000934    JAA93918.1    GFXV01006240    MBW18045.1    GGMS01008634    MBY77837.1    CVRI01000054    CRL00737.1    GBGD01002622    JAC86267.1    GFTR01004189    JAW12237.1    GAMD01000221    JAB01370.1    GGFM01006766    MBW27517.1    ADMH02001180    ETN63814.1    GGFK01002038    MBW35359.1    KK107488    QOIP01000012    EZA49901.1    RLU15846.1    GFDL01008321    JAV26724.1    GECL01002771    JAP03353.1    ATLV01022925    KE525338    KFB48126.1    GAKP01009566    JAC49386.1    GBYB01010817    JAG80584.1    GEZM01087881    JAV58422.1    GBBI01001647    JAC17065.1    APGK01052114    KB741209    ENN72846.1    GGFJ01008448    MBW57589.1    GL888217    EGI64788.1    GALX01003758    JAB64708.1    DS235083    EEB11519.1    ADTU01001112    AAAB01008980    APCN01005234    GBXI01015520    JAC98771.1    JRES01000305    KNC32472.1    KQ976418    KYM89475.1    EAA43639.3    GL444248    EFN61128.1    KQ435850    KOX70873.1    GL448301    EFN84836.1    GFDG01001964    JAV16835.1    KQ976948    KYN06932.1    AXCN02001858    AK417764    BAN20979.1    QCYY01000515    ROT84664.1    AXCM01000229    GDRN01003987    JAI67982.1    GFDG01003521    JAV15278.1    GDHF01000763    JAI51551.1    GDHF01026038    GDHF01005596    JAI26276.1    JAI46718.1    GDAI01001137    JAI16466.1    GEDC01008086    JAS29212.1    KA646583    AFP61212.1    KQ414636    KOC67023.1    JXJN01026769    KQ980989    KYN10493.1    CCAG010009992    EZ424057    ADD20333.1    KQ981855    KYN34829.1    JR043067    AEY59718.1    AAZX01000813    KZ288192    PBC34317.1    KQ982831    KYQ50097.1    KQ434778    KZC04432.1    NNAY01003205    OXU19798.1    CM000361    EDX03913.1    CH480820    EDW54471.1    GGLE01003246    MBY07372.1    CM002910    KMY88462.1    AE014134    AHN54178.1   
Pfam
PF03661   UPF0121        + More
PF01920   Prefoldin_2
Interpro
IPR005344   TMEM33/Pom33        + More
IPR002777   PFD_beta-like       
IPR009053   Prefoldin       
Gene 3D

Ontologies

Topology

Length:
257
Number of predicted TMHs:
3
Exp number of AAs in TMHs:
73.7446800000001
Exp number, first 60 AAs:
21.07855
Total prob of N-in:
0.48227
POSSIBLE N-term signal
sequence
outside
1  -  30
TMhelix
31  -  53
inside
54  -  101
TMhelix
102  -  124
outside
125  -  175
TMhelix
176  -  198
inside
199  -  257
 
 

Population Genetic Test Statistics

Pi
299.833966
Theta
199.9684
Tajima's D
1.869666
CLR
164.626868
CSRT
0.860806959652017
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 VAADGLTQR 100.00 1e-07
26822097 EISISR 100.00 8e-05
28467696 ADQITQYESIK 100.00 8e-05
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号