Gene

KWMTBOMO08533

Pre Gene Modal

BGIBMGA009325

Annotation

PREDICTED:_rho_GTPase-activating_protein_6_[Bombyx_mori]

Location

Bomo_Chr14(-):12214220-12273858      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.647

CDS

ATGGAGCGCCGCCGCCGGCCCGACTCCGACCCCATGACGAAGGTCGTGCGTCGACGCGAGAAGCCGCGCGAACGCTGGCTCCTCACGCGCAAGACATGGAAGTACATGTCCGACGCCGGCCGCCGGCTCGTCCCGGACGGCGCACAGAACCGCCCCGAAGACGTCGGTCGCATCGAAGCCTACTTCCAGGAAGTGTGCGCGAAGGAGCCCCGCTTTGTACTTCGCCGTAAGAGTTCGTACCCGGCGGCACTGCCCAAGCCTCGTCGCAAGGCGCGGCCCCGCGGCGGCTCGGTCCGGGCGCGCTCGCCCTCCGACGACGCGCCGCCGCGACCCACGGATCTCTTCGTCGGCCACATCTCCGGCGGTCGCTTCGATATAGCCAAACTTCGCAAGAACTTTTTCGCCGCTCCGCCCCCCTCGGCCTCCTCTGCCGGGTTCAACTCGAGGGGTCCGCATGACGTGCACTTCGATCTTCGATCTCCGCCCGTCATAGAGGAAGAAACGAGCCTTGTCGATCTGTTGAGAAAATACCTGAAGCTTGAGGAAGAATCCTCTGCGCAAACAAAGATTTCTGAGACGGAAGAGCTTATACGTGCGTTACGTGAATATTTGAAGCGGAACGCGGAGCGTGCCCCTTCGGACGCGGATGGCGACCCCGCCCAGCGCCATCTGCTCGACAGTCTGAGCAGGCATTACATTCGTTCTCCGAATCGAGACGTGGTAGTTCAGGATCTATTAGCCGATAGAAATTTGTTAAAAAGACTATATCATGATCTTCGTAAAACTAAGCCATATCGCGGCGCTAGGAGTGGAGGTAGCGGTGGTGGCGGAAGTGGTGGAGGCTATTCGCCTGGAGTTTACGGTTCGTGCACCAGCTCTAGGTGTGCTCTGCGTCCTCGATCATTGGGTGGAACTCTTATTAAAAACGGCGAAGGTGGGCGCTCCCCGCCGATGTCACCGCCGCCCCTCATTGAAGTGTTTCAAGAGTCGTTTGAGGATAAATTTGTAAATCGAGCGGTCCAGACTCTTCCGATTCCAGAAGACGTGTTATCTGAGCTCGAAAGAGTGTATCGAGAGAAGTTGGAAGCGGCGACCGCGCCGACCAGTCCAACGAGCCCTCCGCCGGAGCGCAAGCCGGGACGTCGCCGCTCCAGCATCGATCACGACGACGTCTCCCAGTCGGTCAGCGACACCATTAAACGATACTTAAGGATGGCACGAAAGAAAAGCGTTGACTCTGAGAAAGTGGATCGCTTCAAGCGAATCAATTACGATAAGAACTTGCGGAATATCAAGCCCCGCATGCCCGGGGAGAGACTTGCAGTTCGCATCGGTGGCGTCGACTCCGACGTCGCCACCTTCCCCGGCCTCACCGTCACTGTCGCACTCGTTTCTGTCGACGCTGTTGGGCCGAAGTGCTCCAGCGGTCGCTCCGCCCGCAGGTGGCATGCAGAAGTCGCGGTCCTCGAGCAGCGTGGTGCAGAGCGTCAGCAAGCGGCTATGGCGGACGCGCAGTCGAAGCTCCAGCCGCGCCTCCTGCACCTGGTCTCCTCAGGGCAGCTGTTGCTGGGTAGATGGAAGCGGGAGGTGCGTGCGGCTCACGGATACTTCGCTTCTGTCCCTCACCGAAGTGGAAAGGAGGGCGCTGCAGCAGGCCGCGCTCGCGAGACTCCAGCAGATCAACTTAGGGACCACCATCAAGATTCCGGAAGACAACACCGTAGTGACGACGACAAAGCCGAAGAGACGGACGTACATGCTGAAGAAGAAAGCGCTCACGACCGGCTTCTTCGACCAGAGTCGGACCAAGGACGCCGACAAGGATAA

Protein

MERRRRPDSDPMTKVVRRREKPRERWLLTRKTWKYMSDAGRRLVPDGAQNRPEDVGRIEAYFQEVCAKEPRFVLRRKSSYPAALPKPRRKARPRGGSVRARSPSDDAPPRPTDLFVGHISGGRFDIAKLRKNFFAAPPPSASSAGFNSRGPHDVHFDLRSPPVIEEETSLVDLLRKYLKLEEESSAQTKISETEELIRALREYLKRNAERAPSDADGDPAQRHLLDSLSRHYIRSPNRDVVVQDLLADRNLLKRLYHDLRKTKPYRGARSGGSGGGGSGGGYSPGVYGSCTSSRCALRPRSLGGTLIKNGEGGRSPPMSPPPLIEVFQESFEDKFVNRAVQTLPIPEDVLSELERVYREKLEAATAPTSPTSPPPERKPGRRRSSIDHDDVSQSVSDTIKRYLRMARKKSVDSEKVDRFKRINYDKNLRNIKPRMPGERLAVRIGGVDSDVATFPGLTVTVALVSVDAVGPKCSSGRSARRWHAEVAVLEQRGAERQQAAMADAQSKLQPRLLHLVSSGQLLLGRWKREVRAAHGYFASVPHRSGKEGAAAGRARETPADQLRDHHQDSGRQHRSDDDKAEETDVHAEEESAHDRLLRPESDQGRRQG

Uniprot

H9JIH5   A0A0N1I8E5   A0A194Q761   A0A2H1WIV6   A0A139WJQ5   A0A1Y1MUD9   + More
A0A3L8DVC0   A0A026WPE4   U4U1V5   U4UU20   U4UPI7   A0A195F3U4   A0A154P6T8   A0A151X658   E2ADU4   A0A195E518   A0A2A3EU39   A0A151IH62   A0A158NPI8   A0A088AH70   A0A195B9C2   A0A2J7R8V3   A0A0J7K5Z6   F4WH74   E2B801   E9ISS5   A0A2S2R5Z0   A0A1B6GBH3   J9JV59   E0VCH2   A0A0L7QP85   A0A0M9A1G7   A0A2R7VZB9   K7ISB2  

Pubmed

19121390    26354079    18362917    19820115    28004739    30249741    + More
24508170    23537049    20798317    21347285    21719571    21282665    20566863    20075255   

EMBL

BABH01027202    BABH01027203    KQ460786    KPJ12201.1    KQ459337    KPJ01382.1    + More
ODYU01008968    SOQ53010.1    KQ971338    KYB28152.1    GEZM01024000    JAV88075.1    QOIP01000003    RLU24384.1    KK107139    EZA57890.1    KB631806    ERL86298.1    KI209379    ERL96028.1    KI209178    ERL95989.1    KQ981836    KYN35056.1    KQ434827    KZC07561.1    KQ982482    KYQ55847.1    GL438820    EFN68456.1    KQ979608    KYN20280.1    KZ288189    PBC34659.1    KQ977643    KYN00871.1    ADTU01022413    ADTU01022414    ADTU01022415    ADTU01022416    KQ976542    KYM81138.1    NEVH01006721    PNF37268.1    LBMM01012929    KMQ85918.1    GL888153    EGI66440.1    GL446268    EFN88186.1    GL765434    EFZ16406.1    GGMS01015937    MBY85140.1    GECZ01009980    JAS59789.1    ABLF02032269    ABLF02032274    ABLF02032276    ABLF02047042    DS235053    EEB11078.1    KQ414822    KOC60440.1    KQ435794    KOX73859.1    KK854154    PTY12271.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000007266    UP000279307    UP000053097    + More
UP000030742    UP000078541    UP000076502    UP000075809    UP000000311    UP000078492    UP000242457    UP000078542    UP000005205    UP000005203    UP000078540    UP000235965    UP000036403    UP000007755    UP000008237    UP000007819    UP000009046    UP000053825    UP000053105    UP000002358   

PRIDE

H9JIH5   

Pfam

PF00620   RhoGAP

Interpro

IPR037863   RHOGAP6/36        + More
IPR008936   Rho_GTPase_activation_prot       
IPR000198   RhoGAP_dom       
IPR041852   ARHGAP6_RhoGAP       

SUPFAM

SSF48350   SSF48350       

Gene 3D

1.10.555.10    

CDD

cd04376  RhoGAP_ARHGAP6

ProteinModelPortal

H9JIH5   A0A0N1I8E5   A0A194Q761   A0A2H1WIV6   A0A139WJQ5   A0A1Y1MUD9   + More
A0A3L8DVC0   A0A026WPE4   U4U1V5   U4UU20   U4UPI7   A0A195F3U4   A0A154P6T8   A0A151X658   E2ADU4   A0A195E518   A0A2A3EU39   A0A151IH62   A0A158NPI8   A0A088AH70   A0A195B9C2   A0A2J7R8V3   A0A0J7K5Z6   F4WH74   E2B801   E9ISS5   A0A2S2R5Z0   A0A1B6GBH3   J9JV59   E0VCH2   A0A0L7QP85   A0A0M9A1G7   A0A2R7VZB9   K7ISB2  

KEGG

101743771    K20631 Rho GTPase-activating protein 6 | (RefSeq) rho GTPase-activating protein 6

GO

GO:0007165  

PANTHER

PTHR12635  

Length:

608

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02651

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00391

outside

1  -  608

 

 

Pi

221.773084

Theta

177.490004

Tajima's D

1.051738

CLR

0.300024

CSRT

0.673316334183291

Interpretation

Uncertain