SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08532
Pre Gene Modal
BGIBMGA009328
Annotation
PREDICTED:_rho_GTPase-activating_protein_6_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.449
 

Sequence

CDS
ATGGGTGTGCGCAGGTGCTCGGAGGTGGGGGGCGAGGGGGCGGCCGAGGGGGCCGGCGAGGGGGGCGAGGGAGGGGAGTCGCGGCGCGTGTGGTCCCGGGAGCACTGTCTGCACAGCGCCGCTGCCACCGGTGGACCACTCGACGCCGTGCGGGACAGGCGCAGTGAGAAGGTCCACCGTCGACGGACGAGGGAGGCAGCCTCGGACGCCTCCTCCGGCTCCGTGTCCTCGGCCATGACCATCGTCACCAGGGTCCGCAGCAGCGAGGAGTGCTGCAGCGGCGTGACGTCATGCACCGCGCCGCTTCTGGACTCCGCGCCGGACTCCAACGACTCCGCCAGCGACTACAACGAGACGGCCTGCGCGTCGGACGACGAGTGCGTCATCACGGCGTCGCTGCACATCCCCGCGGCCTTCGGACCCCCGCGCGTCGCCCCCCCGCGCCGCCGCTCCACCTCCGGCTCCGAGTCCTCACACAAGCGAGACTCGGCCGTGGGCTCGTGTTCCTCGGACGCGTCCTCCCCCGCCGCGTCCCCGCCGCCCCCGACCGCCCCCCTGCGCGTCACGCTCACGTCGGCCGGGGAGCTGCGCCGGCCCACCGACATCGACAAGCTCGTCGCATTCGGCAGAGAGCGGAACACGTCGGACGCGCGCGCAGTGGTGCTTCGCCAGCACGACGACGGCACGCTGCGGCCCCGGACCCCCGCGCGGTCAGACCCCCGCGCCCCGGACCCCCGCGCCCGGGATCACCGCACCCCGGACCCCACGCGGACCCAGGACACCTTGACTCGGAACCAGGAAGTTTCCGCGCGGAAACACGAATCGTTGACCGTCAAAAGAGAAGAGAGGAGAGAAGGAGTGATGTTGTACAAAAGGGGAGAACTAATATCCAGTGCGCCCGCACCGCCCACTTGA
Protein
MGVRRCSEVGGEGAAEGAGEGGEGGESRRVWSREHCLHSAAATGGPLDAVRDRRSEKVHRRRTREAASDASSGSVSSAMTIVTRVRSSEECCSGVTSCTAPLLDSAPDSNDSASDYNETACASDDECVITASLHIPAAFGPPRVAPPRRRSTSGSESSHKRDSAVGSCSSDASSPAASPPPPTAPLRVTLTSAGELRRPTDIDKLVAFGRERNTSDARAVVLRQHDDGTLRPRTPARSDPRAPDPRARDHRTPDPTRTQDTLTRNQEVSARKHESLTVKREERREGVMLYKRGELISSAPAPPT

Summary

Pfam
PF00620   RhoGAP
Interpro
IPR037863   RHOGAP6/36        + More
IPR008936   Rho_GTPase_activation_prot       
IPR000198   RhoGAP_dom       
SUPFAM
SSF48350   SSF48350       
Gene 3D

Ontologies

Topology

Length:
304
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.000510000000000001
Exp number, first 60 AAs:
0
Total prob of N-in:
0.03752
outside
1  -  304
 
 

Population Genetic Test Statistics

Pi
207.769476
Theta
161.550391
Tajima's D
0.902858
CLR
0.049324
CSRT
0.635068246587671
Interpretation
Uncertain
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