Gene

KWMTBOMO08529

Pre Gene Modal

BGIBMGA009368

Annotation

PREDICTED:_uncharacterized_protein_LOC106713881_isoform_X1_[Papilio_machaon]

Location

Bomo_Chr14(+):12170579-12175934      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.002 Nuclear   Reliability : 1.406

CDS

ATGGGTTGTTGCTATAGCATTTGCCACAAAGACAACGACCCACAGGAGAACGTTATAAACGAAAGGACACATCTACTAGAAGTAACGGAGCAGCAACAGGAGACGCTGATACCTGTGGTATCAGCGTCCACACCACCGAGGAAACCAGACGAACAGACTGCTTTGAATAGGATACTTCATGAGACTGCAAATAATGTGATCGACGTGGGCGCGCTGGGCCCGTACACACTGGAGGCCAGCGCGTACAGCGAGAGGGTGCGCGTGTACACGGCGCGGGTGGCGGCCGTGAGCGTGGCGGCCCCCCGCCCCGCGCCGCGGCTCCTCGCTGACGTCACCCACGCCGAGCGAGTGGCCCTACTCAGCTGTCCCCCAATACCGGCCGCAGATAAGGAGCTGATCAGTGGCGCAGTGAGACGAGCCGCCGCCGCCATATCGGAGCTCAGGGTCGAGCACCGGGAGGACCTGGTGGTGCCCTTCCGGGTCCCCTAA

Protein

MGCCYSICHKDNDPQENVINERTHLLEVTEQQQETLIPVVSASTPPRKPDEQTALNRILHETANNVIDVGALGPYTLEASAYSERVRVYTARVAAVSVAAPRPAPRLLADVTHAERVALLSCPPIPAADKELISGAVRRAAAAISELRVEHREDLVVPFRVP

Similarity

Belongs to the histone H1/H5 family.

Uniprot

A0A3S2NYL2   A0A0N1IF32   S4NRU2   A0A212FPH1   A0A194Q8U1   A0A2H1WIV9   + More
A0A232EUK8   E2ADU9   K7J5X7   A0A0L7QJZ3   A0A151X682   A0A195E513   F4WH77   A0A151IH42   V9IGE6   A0A158NXG2   A0A3L8DXS3   A0A088AGW9   A0A195F3T8   A0A026WPE8   A0A0C9RZ94   A0A0M9A1H3   A0A0J7NA31   A0A2J7R3A9   A0A2A3ESC0   A0A195B9D0   D2A1I8   A0A067R1V2   A0A1Y1LZ56   A0A1B6DAU7   A0A1B6HBE3   V5GRP0   A0A154P6I7   A0A1B6EV42   A0A2M3ZDF1   W5JWC4   A0A2M4AYR2   A0A0A9WRN2   A0A0P4WF90   U5EWX5   A0A182FKA7   A0A2R7WZ06   A0A182YIR9   A0A2M4C115   A0A182STF4   A0A0P4VKV8   R4G8C9   A0A0V0G5I6   A0A182RJR3   A0A182JAE4   A0A2C9GRG2   A0A224XYC6   A0A182LNC5   Q7QDW9   A0A182Q4M6   A0A210QD27   A0A182W3V4   A0A023EJ00   Q17NY6   A7RFI0   R7V1T1   E0V989   A0A1W4WS63   A0A1B0CSX4   A0A1B6KAL9   A0A0K8TRA4   A0A0A9W3R7   A0A0P5GV55   A0A0P5KDY1   A0A1L8DV71   A0A2P8XVA5   E9G1G6   A0A023F7K8   V4A3J1   A0A182PSB2   A0A182NDN8   A0A336LIF4   A0A182X842   A0A182UCU3   A0A1Q3F8H1   A0A1Q3F8N7   C3YZ87   B0XCW5   A0A1J1HIU0   A0A0N7ZJC9   A0A0L8HLK3   A0A1S3D9S7   T1JL32   B3M3J9   A0A0L8HMM1   B3N2B1   A0A1D2NG19   A0A2R5LIG3   A0A0P6F091   G3VLI0   A0A293MV49   A0A2U3Z9V8   U4UIG1  

Pubmed

26354079    23622113    22118469    28648823    20798317    20075255    + More
21719571    21347285    30249741    24508170    18362917    19820115    24845553    28004739    20920257    23761445    25401762    26823975    25244985    27129103    20966253    12364791    14747013    17210077    28812685    24945155    17510324    17615350    23254933    20566863    26369729    29403074    21292972    25474469    18563158    17994087    27289101    21709235    23537049   

EMBL

RSAL01000023    RVE52299.1    KQ460786    KPJ12198.1    GAIX01011059    JAA81501.1    + More
AGBW02002847    OWR55613.1    KQ459337    KPJ01385.1    ODYU01008968    SOQ53005.1    NNAY01002114    OXU22040.1    GL438820    EFN68461.1    KQ415028    KOC58914.1    KQ982482    KYQ55852.1    KQ979608    KYN20275.1    GL888153    EGI66443.1    KQ977643    KYN00866.1    JR046287    AEY60168.1    ADTU01030036    QOIP01000003    RLU25166.1    KQ981836    KYN35051.1    KK107139    EZA57895.1    GBYB01013426    JAG83193.1    KQ435794    KOX73869.1    LBMM01007693    KMQ89505.1    NEVH01007822    PNF35312.1    KZ288189    PBC34655.1    KQ976542    KYM81141.1    KQ971338    EFA02668.2    KK852773    KDR16818.1    GEZM01044978    JAV77998.1    GEDC01014485    JAS22813.1    GECU01035675    JAS72031.1    GALX01001622    JAB66844.1    KQ434827    KZC07556.1    GECZ01028019    JAS41750.1    GGFM01005825    MBW26576.1    ADMH02000080    ETN67883.1    GGFK01012612    MBW45933.1    GBHO01036079    GBRD01009215    GDHC01017065    JAG07525.1    JAG56606.1    JAQ01564.1    GDRN01035406    JAI67403.1    GANO01000350    JAB59521.1    KK856067    PTY24769.1    GGFJ01009859    MBW59000.1    GDKW01000858    JAI55737.1    ACPB03007718    GAHY01001192    JAA76318.1    GECL01002801    JAP03323.1    APCN01005173    GFTR01003213    JAW13213.1    AAAB01008849    EAA07212.2    AXCN02002119    NEDP02004117    OWF46628.1    GAPW01004914    GEHC01000326    JAC08684.1    JAV47319.1    CH477195    EAT48412.1    DS469508    EDO49725.1    AMQN01019361    KB295646    ELU12803.1    DS234991    EEB09945.1    AJWK01026741    GEBQ01031489    GEBQ01023719    JAT08488.1    JAT16258.1    GDAI01000942    JAI16661.1    GBHO01044094    GBRD01002033    JAF99509.1    JAG63788.1    GDIQ01258530    JAJ93194.1    GDIQ01191981    GDIP01043172    LRGB01003163    JAK59744.1    JAM60543.1    KZS03920.1    GFDF01003746    JAV10338.1    PYGN01001295    PSN35933.1    GL732529    EFX86496.1    GBBI01001523    JAC17189.1    KB202591    ESO89515.1    UFQT01000020    SSX17874.1    GFDL01011180    JAV23865.1    GFDL01011158    JAV23887.1    GG666566    EEN54158.1    DS232723    EDS45160.1    CVRI01000006    CRK87968.1    GDIP01239705    JAI83696.1    KQ417858    KOF90029.1    JH431789    CH902618    EDV39260.1    KOF90030.1    CH902928    EDV44989.1    LJIJ01000051    ODN04201.1    GGLE01004991    MBY09117.1    GDIQ01056782    JAN37955.1    AEFK01120163    GFWV01019113    MAA43841.1    KB632373    ERL93794.1   

Proteomes

UP000283053    UP000053240    UP000007151    UP000053268    UP000215335    UP000000311    + More
UP000002358    UP000053825    UP000075809    UP000078492    UP000007755    UP000078542    UP000005205    UP000279307    UP000005203    UP000078541    UP000053097    UP000053105    UP000036403    UP000235965    UP000242457    UP000078540    UP000007266    UP000027135    UP000076502    UP000000673    UP000069272    UP000076408    UP000075901    UP000015103    UP000075900    UP000075880    UP000075840    UP000075882    UP000007062    UP000075886    UP000242188    UP000075920    UP000008820    UP000001593    UP000014760    UP000009046    UP000192223    UP000092461    UP000076858    UP000245037    UP000000305    UP000030746    UP000075885    UP000075884    UP000076407    UP000075902    UP000001554    UP000002320    UP000183832    UP000053454    UP000079169    UP000007801    UP000094527    UP000007648    UP000245340    UP000030742   

Pfam

PF15454   LAMTOR        + More
PF02045   CBFB_NFYA
PF00538   Linker_histone

Interpro

IPR028209   LAMTOR1/MEH1        + More
IPR018362   CCAAT-binding_factor_CS       
IPR001289   NFYA       
IPR036388   WH-like_DNA-bd_sf       
IPR005818   Histone_H1/H5_H15       
IPR036390   WH_DNA-bd_sf       
IPR005819   Histone_H5       

SUPFAM

SSF46785   SSF46785       

Gene 3D

1.10.10.10    

CDD

cd00073  H15

ProteinModelPortal

A0A3S2NYL2   A0A0N1IF32   S4NRU2   A0A212FPH1   A0A194Q8U1   A0A2H1WIV9   + More
A0A232EUK8   E2ADU9   K7J5X7   A0A0L7QJZ3   A0A151X682   A0A195E513   F4WH77   A0A151IH42   V9IGE6   A0A158NXG2   A0A3L8DXS3   A0A088AGW9   A0A195F3T8   A0A026WPE8   A0A0C9RZ94   A0A0M9A1H3   A0A0J7NA31   A0A2J7R3A9   A0A2A3ESC0   A0A195B9D0   D2A1I8   A0A067R1V2   A0A1Y1LZ56   A0A1B6DAU7   A0A1B6HBE3   V5GRP0   A0A154P6I7   A0A1B6EV42   A0A2M3ZDF1   W5JWC4   A0A2M4AYR2   A0A0A9WRN2   A0A0P4WF90   U5EWX5   A0A182FKA7   A0A2R7WZ06   A0A182YIR9   A0A2M4C115   A0A182STF4   A0A0P4VKV8   R4G8C9   A0A0V0G5I6   A0A182RJR3   A0A182JAE4   A0A2C9GRG2   A0A224XYC6   A0A182LNC5   Q7QDW9   A0A182Q4M6   A0A210QD27   A0A182W3V4   A0A023EJ00   Q17NY6   A7RFI0   R7V1T1   E0V989   A0A1W4WS63   A0A1B0CSX4   A0A1B6KAL9   A0A0K8TRA4   A0A0A9W3R7   A0A0P5GV55   A0A0P5KDY1   A0A1L8DV71   A0A2P8XVA5   E9G1G6   A0A023F7K8   V4A3J1   A0A182PSB2   A0A182NDN8   A0A336LIF4   A0A182X842   A0A182UCU3   A0A1Q3F8H1   A0A1Q3F8N7   C3YZ87   B0XCW5   A0A1J1HIU0   A0A0N7ZJC9   A0A0L8HLK3   A0A1S3D9S7   T1JL32   B3M3J9   A0A0L8HMM1   B3N2B1   A0A1D2NG19   A0A2R5LIG3   A0A0P6F091   G3VLI0   A0A293MV49   A0A2U3Z9V8   U4UIG1  

PDB

6B9X     E-value=2.32892e-08,     Score=135

KEGG

101738293    no KO assigned | (RefSeq) uncharacterized LOC101738293

GO

GO:0001919   GO:0043410   GO:0042632   GO:0016197   GO:0032008   GO:0071230   GO:0007040   GO:0071986   GO:0003700   GO:0003677   GO:0016602   GO:0034613   GO:0005764   GO:0006334   GO:0005634   GO:0000786   GO:0001558   GO:0032418   GO:0010874   GO:0060090   GO:0060620   GO:0010872   GO:0005085   GO:0007032   GO:0031902   GO:0032439   GO:0045121   GO:0016876   GO:0043039  

PANTHER

PTHR12632  

Subcellular location

Chromosome  
Nucleus  

Length:

162

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00348

Exp number, first 60 AAs:

4e-05

Total prob of N-in:

0.29975

outside

1  -  162

 

 

Pi

235.990971

Theta

168.27078

Tajima's D

0.686746

CLR

0.811194

CSRT

0.571971401429929

Interpretation

Uncertain