Gene

KWMTBOMO08528  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA009329

Annotation

PREDICTED:_endoplasmic_reticulum-Golgi_intermediate_compartment_protein_2_[Papilio_machaon]

Location

Bomo_Chr14(-):12168800-12170088      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.52 PlasmaMembrane   Reliability : 1.053

CDS

ATGTTAAGGTATCGAGGGAAAAAGAACATTTTGGAAAAAGTAAAGGAATACGATGCTTTCCCTAAAGTTCCTGATGAATACGTCGCGAGTACCCCGGTAGGAGGAACGTTTTCAGTTATCACATTTTTCATTATCCTTTGGTTAATTTACAGTGAAGTTACGTACTATTTAGACAGTAATTTAGTATTCAAATTTATGCCAGACATAGACATGGACGAAAAGTTACGAATAAACATCGATATAACCGTAGCAATGCCTTGCTCGAACATCGGTTCTGATATCTTGGACTCTACCTCGCAAAGTGTTTTCGGATTCGGTGAATTACAAGAGGAAGACACTTGGTTCGAGCTCACAGAAGAACAACAAGACGCGTTTGACGCTATAAAGTATATAAACTCTTATTTAAGAGAAGAGTATCATTCCGTTTGGCAGCTACTTTGGAAAAAGGGTCATGGCTCCGTTCGCTCTACTATACCAGAGCGTAAAACGAAAATGAACAAACGGCCGGATGCCTGTAGACTTCATGGAGTTCTGACGTTAAATAAAGTGGCTGGCAACTTCCACATAACTGCAGGAAAGAGTCTACATCTGCCCCGTGGGCACATACACTTAAATATGCTCTTTGATGATACTCCACAGAACTTCAGTCACAGGATACACCGTCTCAGTTTTGGCAGTCCAACCAATGGGATTATTTACCCTCTAGAAGGTGACGAGAAGATCACGAATGATGAAAATATGCTATATCAGTATTTTGTTGATGTTGTACCAACTGACGTTGACAATACATTTGAGACAGTAAAAGCATATCAATATTCAGTTAAAGAGTTAGAAAGACCTATAAGTCACGTGAAGGGATCTCATGGAGTTCCTGGTATTTTCTTCAAATACGATATGGCTGCATTGAAAGTTAAAGTGTATCAAGAGAGAGAAAACATGCTGCAGTTCACGTTAAGACTATTTTCAGTAATAGGAGGCATTTATGTTATAATAGGATTTATTAATGCAATAGTGTTAACGTTACAATCATACTTTGTGACAAAACCAATTAAAGATAAAAAACAGTTAGAGGTTAAAACACCTCAAAATAACTACACAACCAATGCTTTGTTTGTGGCAACAGAGTTAAGTGTTCCAGTTGAACTTGTAAAACAATAA

Protein

MLRYRGKKNILEKVKEYDAFPKVPDEYVASTPVGGTFSVITFFIILWLIYSEVTYYLDSNLVFKFMPDIDMDEKLRINIDITVAMPCSNIGSDILDSTSQSVFGFGELQEEDTWFELTEEQQDAFDAIKYINSYLREEYHSVWQLLWKKGHGSVRSTIPERKTKMNKRPDACRLHGVLTLNKVAGNFHITAGKSLHLPRGHIHLNMLFDDTPQNFSHRIHRLSFGSPTNGIIYPLEGDEKITNDENMLYQYFVDVVPTDVDNTFETVKAYQYSVKELERPISHVKGSHGVPGIFFKYDMAALKVKVYQERENMLQFTLRLFSVIGGIYVIIGFINAIVLTLQSYFVTKPIKDKKQLEVKTPQNNYTTNALFVATELSVPVELVKQ

Uniprot

H9JIH9   A0A2A4JDB7   A0A1E1WB79   A0A2H1X1W7   A0A3S2LF20   A0A0N1IGK2   + More
A0A194QD58   A0A212FPE4   A0A0L7LS97   S4PHL9   A0A1Y1LZU7   A0A067QH48   A0A195CL78   E2A0I6   A0A0T6BAF0   A0A195D9Y7   F4WZ14   A0A195F3X3   A0A1B6HFA2   A0A195BQR0   A0A158NDL4   A0A1B6GL18   A0A154PI72   A0A1B6KXN3   A0A2M4BRP7   A0A088A2M3   A0A2A3E563   A0A182FEN4   A0A0L7RB96   A0A2M4BRB1   A0A2M3Z8X1   A0A2M4AB48   A0A0J7KIQ1   A0A151XES0   A0A2M4CSD4   A0A2M4BRF8   A0A2M4CSG9   A0A1L8DVG1   E2BHN7   E9IU73   A0A3L8E031   A0A0M9A1W8   A0A182RUW7   D6WF35   A0A182QSX9   A0A182VAK6   Q7Q9U1   A0A182HPE5   A0A182X0X8   A0A182WMA3   A0A182YRM6   A0A182UFQ6   U5EHR7   A0A1B6E230   A0A182NLV7   A0A182IWX0   A0A2P8Y317   A0A182NZR9   E0VCV5   A0A232EM79   K7J8C3   A0A336L6N7   A0A336N1E6   A0A1W4WFI3   A0A026WHN6   A0A084WKY2   T1HI76   W5JQC2   A0A0P4VQ11   A0A023F2D1   A0A0A9YSQ9   A0A146KX15   A0A0K8T9I2   J3JU94   A0A0V0G4Q2   A0A069DTM4   U4U9K2   A0A182LB54   A0A423SW94   V5GK54   A0A1D2NBW4   A0A224XEW5   A0A1W7RAJ2   A0A0K8TST3   A0A226ESL0   C1BT41   A0A0K2V8W0   E9FSB5   A0A0P5TGC1   A0A2S2QYH3   A0A0N8AN99   A0A0P5NDZ5   A0A0P6IGK1   A0A0P6AD16   A0A0P5KHN5   A0A210QDD3   A0A087TXM9   T1JCT3   A0A2R2MLP5   W8C1V5  

Pubmed

19121390    26354079    22118469    26227816    23622113    28004739    + More
24845553    20798317    21719571    21347285    21282665    30249741    18362917    19820115    12364791    14747013    17210077    25244985    29403074    20566863    28648823    20075255    24508170    24438588    20920257    23761445    27129103    25474469    25401762    26823975    22516182    23537049    26334808    20966253    27289101    26369729    21292972    28812685    24495485   

EMBL

BABH01027194    NWSH01001966    PCG69544.1    GDQN01006933    JAT84121.1    ODYU01012826    + More
SOQ59323.1    RSAL01000023    RVE52300.1    KQ460786    KPJ12197.1    KQ459337    KPJ01386.1    AGBW02002847    OWR55614.1    JTDY01000247    KOB78071.1    GAIX01005750    JAA86810.1    GEZM01044408    JAV78248.1    KK853443    KDR07600.1    KQ977600    KYN01470.1    GL435626    EFN72889.1    LJIG01002628    KRT84312.1    KQ981082    KYN09698.1    GL888465    EGI60517.1    KQ981820    KYN35158.1    GECU01034348    JAS73358.1    KQ976424    KYM88299.1    ADTU01012715    GECZ01006679    JAS63090.1    KQ434899    KZC11018.1    GEBQ01023787    JAT16190.1    GGFJ01006460    MBW55601.1    KZ288367    PBC26830.1    KQ414617    KOC68113.1    GGFJ01006459    MBW55600.1    GGFM01004238    MBW24989.1    GGFK01004686    MBW38007.1    LBMM01007007    KMQ90124.1    KQ982254    KYQ58768.1    GGFL01004088    MBW68266.1    GGFJ01006461    MBW55602.1    GGFL01004089    MBW68267.1    GFDF01003681    JAV10403.1    GL448322    EFN84785.1    GL765847    EFZ15869.1    QOIP01000002    RLU25823.1    KQ435793    KOX74253.1    KQ971327    EEZ99853.1    AXCN02000946    AAAB01008900    EAA09437.3    APCN01002983    GANO01002909    JAB56962.1    GEDC01029356    GEDC01005305    JAS07942.1    JAS31993.1    PYGN01000989    PSN38657.1    DS235065    EEB11211.1    NNAY01003411    OXU19456.1    AAZX01010098    UFQS01002238    UFQT01002238    SSX13566.1    SSX32993.1    UFQT01003921    SSX35369.1    KK107200    EZA55498.1    ATLV01024157    KE525350    KFB50876.1    ACPB03006711    ADMH02000413    ETN66612.1    GDKW01002704    JAI53891.1    GBBI01003441    JAC15271.1    GBHO01008958    GBHO01008957    GBHO01008956    JAG34646.1    JAG34647.1    JAG34648.1    GDHC01021429    GDHC01018464    JAP97199.1    JAQ00165.1    GBRD01004002    GBRD01004001    JAG61820.1    APGK01030369    BT126807    KB740770    AEE61769.1    ENN79004.1    GECL01003097    JAP03027.1    GBGD01001773    JAC87116.1    KB632132    ERL89008.1    QCYY01002671    ROT68398.1    GALX01004027    JAB64439.1    LJIJ01000105    ODN02575.1    GFTR01005411    JAW11015.1    GFAH01000219    JAV48170.1    GDAI01000410    JAI17193.1    LNIX01000002    OXA60208.1    BT077770    ACO12194.1    HACA01029617    CDW46978.1    GL732523    EFX90347.1    GDIP01126604    JAL77110.1    GGMS01013572    MBY82775.1    GDIQ01259067    JAJ92657.1    GDIQ01146748    JAL04978.1    GDIQ01006331    JAN88406.1    GDIP01032352    JAM71363.1    GDIQ01209570    JAK42155.1    NEDP02004093    OWF46754.1    KK117218    KFM69868.1    JH432078    GAMC01006839    JAB99716.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053240    UP000053268    UP000007151    + More
UP000037510    UP000027135    UP000078542    UP000000311    UP000078492    UP000007755    UP000078541    UP000078540    UP000005205    UP000076502    UP000005203    UP000242457    UP000069272    UP000053825    UP000036403    UP000075809    UP000008237    UP000279307    UP000053105    UP000075900    UP000007266    UP000075886    UP000075903    UP000007062    UP000075840    UP000076407    UP000075920    UP000076408    UP000075902    UP000075884    UP000075880    UP000245037    UP000075885    UP000009046    UP000215335    UP000002358    UP000192223    UP000053097    UP000030765    UP000015103    UP000000673    UP000019118    UP000030742    UP000075882    UP000283509    UP000094527    UP000198287    UP000000305    UP000242188    UP000054359    UP000085678   

PRIDE

H9JIH9   

Pfam

PF13850   ERGIC_N        + More
PF07970   COPIIcoated_ERV
PF16282   SANT_DAMP1_like
PF05499   DMAP1
PF00069   Pkinase

Interpro

IPR039542   Erv_N        + More
IPR012936   Erv_C       
IPR008468   DMAP1       
IPR032563   DAMP1_SANT-like       
IPR027109   Swc4/Dmap1       
IPR000719   Prot_kinase_dom       
IPR011009   Kinase-like_dom_sf       
IPR018480   PNAcMuramoyl-5peptid_Trfase_CS       

SUPFAM

SSF56112   SSF56112       

ProteinModelPortal

H9JIH9   A0A2A4JDB7   A0A1E1WB79   A0A2H1X1W7   A0A3S2LF20   A0A0N1IGK2   + More
A0A194QD58   A0A212FPE4   A0A0L7LS97   S4PHL9   A0A1Y1LZU7   A0A067QH48   A0A195CL78   E2A0I6   A0A0T6BAF0   A0A195D9Y7   F4WZ14   A0A195F3X3   A0A1B6HFA2   A0A195BQR0   A0A158NDL4   A0A1B6GL18   A0A154PI72   A0A1B6KXN3   A0A2M4BRP7   A0A088A2M3   A0A2A3E563   A0A182FEN4   A0A0L7RB96   A0A2M4BRB1   A0A2M3Z8X1   A0A2M4AB48   A0A0J7KIQ1   A0A151XES0   A0A2M4CSD4   A0A2M4BRF8   A0A2M4CSG9   A0A1L8DVG1   E2BHN7   E9IU73   A0A3L8E031   A0A0M9A1W8   A0A182RUW7   D6WF35   A0A182QSX9   A0A182VAK6   Q7Q9U1   A0A182HPE5   A0A182X0X8   A0A182WMA3   A0A182YRM6   A0A182UFQ6   U5EHR7   A0A1B6E230   A0A182NLV7   A0A182IWX0   A0A2P8Y317   A0A182NZR9   E0VCV5   A0A232EM79   K7J8C3   A0A336L6N7   A0A336N1E6   A0A1W4WFI3   A0A026WHN6   A0A084WKY2   T1HI76   W5JQC2   A0A0P4VQ11   A0A023F2D1   A0A0A9YSQ9   A0A146KX15   A0A0K8T9I2   J3JU94   A0A0V0G4Q2   A0A069DTM4   U4U9K2   A0A182LB54   A0A423SW94   V5GK54   A0A1D2NBW4   A0A224XEW5   A0A1W7RAJ2   A0A0K8TST3   A0A226ESL0   C1BT41   A0A0K2V8W0   E9FSB5   A0A0P5TGC1   A0A2S2QYH3   A0A0N8AN99   A0A0P5NDZ5   A0A0P6IGK1   A0A0P6AD16   A0A0P5KHN5   A0A210QDD3   A0A087TXM9   T1JCT3   A0A2R2MLP5   W8C1V5  

PDB

3ZLC     E-value=7.14587e-07,     Score=127

KEGG

101743492    K20366 endoplasmic reticulum-Golgi intermediate compartment protein 2 | (RefSeq) endoplasmic reticul

GO

GO:0016021   GO:0043968   GO:0006281   GO:0035267   GO:0006338   GO:0043967   GO:0008168   GO:0045892   GO:0030134   GO:0030176   GO:0030173   GO:0006890   GO:0006888   GO:0005783   GO:0005524   GO:0004672  

PANTHER

PTHR12855  

Length:

385

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

45.27371

Exp number, first 60 AAs:

22.31459

Total prob of N-in:

0.66581

POSSIBLE N-term signal

sequence

inside

1  -  26

TMhelix

27  -  49

outside

50  -  322

TMhelix

323  -  345

inside

346  -  385

 

 

Pi

81.278261

Theta

192.228075

Tajima's D

-1.739822

CLR

791.783086

CSRT

0.031898405079746

Interpretation

Uncertain