Gene

KWMTBOMO08524

Pre Gene Modal

BGIBMGA009333

Annotation

PREDICTED:_amyloid_beta_A4_precursor_protein-binding_family_B_member_2-like_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr14(-):11926317-11999617      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.487

CDS

ATGCACGACGGCAAAACCACGCCCGACGATTACGACAACTACCTGGACAACAGACGAGTTGAAGACGAGGCTTCGTCGCCACTAAACAAGACAAATGAAAAGAACGGCTTCATAACGCCCCCACAACAGAATGGTGGTGACGACTCCCCTCCTCCGGAGAAGGAGAGGGCTGACCAGGAAGATACGGAGAAGAGTCACGCGGCACCCGTTCCCCACTCGGCTGAAGGACCCAATGATGATCTGTACGCGATACCAGTGAAGCTCAGACCGAAGAAAGAACCTCAGCTACCACCAGGATGGGAAAAACACGAGGATAACGACGGCCCATACTATTGGCACATAAAGAGCGGCACAATTCAAAGAGAGATTCCCAAAATGCCCCCCATTGAAGCTAGGGAATCCCGTATTTCCATGGTCAGAGACTGCTCGAATCTCTCCGAAGTCAGCAAATATGAGGGTGCAGTGATGACCTCGTCTGTGACCAGGAGTACAACAAGTGGAGCTCTCGACCATGTCGATCAAGAAGCTGAGAGGAAACGAAAAGAGGAGATTTCTTACAAACGCCGCAGTTACCCAGCCCGTCCAGAACCAGACAACGGGCGTGCTGTACGATTCTTCGTTCGTTCCCTCGGCTGGGTCGAGATCTCAGAGTCGGATCTGACCCCAGAACGATCCAGTAGAGCAGTCAACAAATGCATCGTGGACCTCAGCTTGGGTCGAAATGATCTTTTAGATCAAGTTGGTCGTTGGGGCGATGGTAAGGATCTGTTCATGGATCTAGATGATGGCGCCTTGAAACTGATAGATCCAGAGAGCCTGAACACACTTCACACACAGCCCATTCACACTATACGTGTTTGGGGAGTTGGAAGGGATAATGGACGAGATTTTGCATATGTGGCTCGGGATCGCGCTACTCGCAAGCACATGTGCCACGTGTTCCGATGCGAGGCTCCTGCCCGTACCATAGCCAATGCACTCCGGGACATATGCAAGCGCATCATGATTGAACGCTCCTTACAACCGCCGCCGCGTCCCACTGACTTACCCTCAACCAGGCGTCCTCGTCCATTATCAGTGGGCTGTGCGTTCCCGACTCCTATGGAAGAGCCTCGCAAGACCGTCCGAGCGTTATACCTGGGCAGCGCCGAGGTGTCCCGGGCTACCGGCATGCGCGTGCTGAATGATGCCCTAGAGCGGTTGGCCGCGGCGCGACCTCCGTCCGCGTGGCGCCCCGTGCACGTCGCCGTGGCTCCTTCCATGATCACCATCACCGAGGAGGGGGAAACGACTCCGATAGTGGAGTGCCGCGTCCGGTACCTGTCGTTCCTGGGCATAGGGCGCGACGTCCGCCGCTGCGCCTTCATCGTGCACACCGCCCAGGAGTTGTTCGTCGCGCACGCCTTCCACACCGAGCCCTCGTCGGGCGCGCTCTGCAAGACCATCGAGGCCGCCTGCAAGCTCCGGTACCAGAAGTGTCTGGACGCGCACGGCGGGGCGGCGGCGGCGGGGGCAGGCGGCGCGGCGGGGGGCGAGGGGCGCGCGTCGCTCGGCCAGGCCCTCAAGTCTCTGGTGGGCTCGCTCACGGGCCGCCGCTCCTCCTGA

Protein

MHDGKTTPDDYDNYLDNRRVEDEASSPLNKTNEKNGFITPPQQNGGDDSPPPEKERADQEDTEKSHAAPVPHSAEGPNDDLYAIPVKLRPKKEPQLPPGWEKHEDNDGPYYWHIKSGTIQREIPKMPPIEARESRISMVRDCSNLSEVSKYEGAVMTSSVTRSTTSGALDHVDQEAERKRKEEISYKRRSYPARPEPDNGRAVRFFVRSLGWVEISESDLTPERSSRAVNKCIVDLSLGRNDLLDQVGRWGDGKDLFMDLDDGALKLIDPESLNTLHTQPIHTIRVWGVGRDNGRDFAYVARDRATRKHMCHVFRCEAPARTIANALRDICKRIMIERSLQPPPRPTDLPSTRRPRPLSVGCAFPTPMEEPRKTVRALYLGSAEVSRATGMRVLNDALERLAAARPPSAWRPVHVAVAPSMITITEEGETTPIVECRVRYLSFLGIGRDVRRCAFIVHTAQELFVAHAFHTEPSSGALCKTIEAACKLRYQKCLDAHGGAAAAGAGGAAGGEGRASLGQALKSLVGSLTGRRSS

Uniprot

H9JII3   A0A2H1WH57   A0A437BPJ2   A0A2A4JPS2   A0A194QD62   A0A0N1INW0   + More
A0A0L7KSL1   A0A1Y1M8A8   A0A1Y1M3Z0   A0A1Y1M4C0   A0A1Y1M415   A0A1Y1M4W8   A0A1Y1M9E9   A0A0T6B9K5   D2A105   A0A088AUF6   A0A310SE65   V9ICT6   A0A2P8YVC3   A0A0L7R2D3   A0A2A3ERJ5   K7IXF4   E2BZJ1   A0A151WLS5   A0A195B6C0   V9IBF6   E2A445   F4WL26   A0A0C9R655   A0A195CI61   A0A151J945   A0A1B6EF56   A0A195FBH5   A0A1B6DD44   A0A1B6CDF2   A0A1B6MUW8   A0A1B6MC25   U4UPN9   A0A0J7LA34   N6TST1   A0A158NZL6   A0A1B6IYB6   A0A2J7R4K9   A0A232FAJ2   A0A026W7W9   A0A1W4WR47   A0A154PL54   T1HF23   A0A2H8U058   J9K3V1   A0A0P4VWF5   E0VDP9   A0A146KZ07   A0A023F3E5   A0A067RHT1   A0A0A9X2N4   A0A1B0CKN9   A0A0A9YB99   A0A146LW99   Q17C69   A0A182RJQ9   A0A182W3V0   A0A1J1J6A7   A0A182LNC2   A0A1S4H412   A0A1B0DCI3   A0A182HXB6   A0A182FKB0   A0A0K8T7M1   A0A182K496   A0A0P4VYW9   A0A182NDN4   A0A182GZR8   T1J3F3   A0A0P6DQE4   A0A0P5YXE4   A0A0P5C7Q9   A0A182PSB5   A0A0P5MBA9   A0A0P5XGC3   A0A3L8D6N6   A0A162SLQ5   A0A0N8AVA2   A0A0P5WM83   A0A0P5PNL9   A0A0P6HKB0   A0A2L2YK26   A0A087TEB6   A0A0N8BL99   A0A0P5XWY2   E9GTU4   A0A0P5CHB0   A0A0P5C7Y9   A0A0P6D1T1   A0A0P5DCI7   A0A0N8EEG3   A0A0P6CUN5   A0A0P6GYB5   A0A0P5YBF6   A0A0P6BM69  

Pubmed

19121390    26354079    26227816    28004739    18362917    19820115    + More
29403074    20075255    20798317    21719571    23537049    21347285    28648823    24508170    27129103    20566863    26823975    25474469    24845553    25401762    17510324    20966253    12364791    26483478    30249741    26561354    21292972   

EMBL

BABH01027180    BABH01027181    ODYU01008645    SOQ52405.1    RSAL01000023    RVE52302.1    + More
NWSH01000907    PCG73584.1    KQ459337    KPJ01391.1    KQ460786    KPJ12194.1    JTDY01006330    KOB66095.1    GEZM01041218    JAV80565.1    GEZM01041219    JAV80564.1    GEZM01041220    JAV80563.1    GEZM01041221    JAV80562.1    GEZM01041222    JAV80561.1    GEZM01041217    JAV80566.1    LJIG01002922    KRT84018.1    KQ971338    EFA02585.1    KQ766603    OAD53633.1    JR038967    AEY58467.1    PYGN01000339    PSN48198.1    KQ414666    KOC64931.1    KZ288192    PBC34358.1    AAZX01004378    AAZX01004609    AAZX01007969    AAZX01007971    AAZX01015635    GL451627    EFN78889.1    KQ982944    KYQ48842.1    KQ976587    KYM79729.1    JR038968    AEY58468.1    GL436526    EFN71811.1    GL888207    EGI64989.1    GBYB01003480    JAG73247.1    KQ977720    KYN00421.1    KQ979471    KYN21430.1    GEDC01000731    JAS36567.1    KQ981685    KYN37980.1    GEDC01013738    JAS23560.1    GEDC01025837    JAS11461.1    GEBQ01000243    JAT39734.1    GEBQ01006491    JAT33486.1    KB632390    ERL94453.1    LBMM01000153    KMR04708.1    APGK01055826    KB741270    ENN71401.1    ADTU01004729    ADTU01004730    ADTU01004731    ADTU01004732    ADTU01004733    ADTU01004734    ADTU01004735    ADTU01004736    ADTU01004737    ADTU01004738    GECU01015810    JAS91896.1    NEVH01007407    PNF35759.1    NNAY01000600    OXU27458.1    KK107353    EZA52093.1    KQ434954    KZC12582.1    ACPB03015449    GFXV01006973    MBW18778.1    ABLF02035159    GDKW01000144    JAI56451.1    DS235083    EEB11505.1    GDHC01017854    JAQ00775.1    GBBI01002946    JAC15766.1    KK852629    KDR19882.1    GBHO01041654    GBHO01029681    GBHO01029679    GBHO01029678    JAG01950.1    JAG13923.1    JAG13925.1    JAG13926.1    AJWK01016488    AJWK01016489    GBHO01017538    GBHO01014708    JAG26066.1    JAG28896.1    GDHC01008231    GDHC01006742    GDHC01006681    JAQ10398.1    JAQ11887.1    JAQ11948.1    CH477311    EAT43922.1    CVRI01000069    CRL07006.1    AAAB01008849    AJVK01005111    AJVK01005112    AJVK01005113    APCN01005173    GBRD01004651    JAG61170.1    GDRN01097116    JAI59201.1    JXUM01100173    JXUM01100174    JXUM01100175    JXUM01100176    JXUM01100177    JXUM01100178    JXUM01100179    JXUM01100180    JXUM01100181    JXUM01100182    JH431826    GDIQ01084190    GDIQ01054153    JAN10547.1    GDIP01053258    JAM50457.1    GDIP01174269    JAJ49133.1    GDIQ01166668    JAK85057.1    GDIP01074149    JAM29566.1    QOIP01000012    RLU15916.1    LRGB01000024    KZS21425.1    GDIQ01239443    GDIQ01036903    JAK12282.1    GDIP01084382    JAM19333.1    GDIQ01146741    JAL04985.1    GDIQ01018578    JAN76159.1    IAAA01032182    LAA08473.1    KK114834    KFM63455.1    GDIQ01166667    JAK85058.1    GDIP01066053    JAM37662.1    GL732564    EFX77134.1    GDIP01174267    JAJ49135.1    GDIP01174270    JAJ49132.1    GDIQ01084189    JAN10548.1    GDIP01174268    JAJ49134.1    GDIQ01034764    JAN59973.1    GDIQ01087495    JAN07242.1    GDIQ01039304    JAN55433.1    GDIP01074148    JAM29567.1    GDIP01012665    JAM91050.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053268    UP000053240    UP000037510    + More
UP000007266    UP000005203    UP000245037    UP000053825    UP000242457    UP000002358    UP000008237    UP000075809    UP000078540    UP000000311    UP000007755    UP000078542    UP000078492    UP000078541    UP000030742    UP000036403    UP000019118    UP000005205    UP000235965    UP000215335    UP000053097    UP000192223    UP000076502    UP000015103    UP000007819    UP000009046    UP000027135    UP000092461    UP000008820    UP000075900    UP000075920    UP000183832    UP000075882    UP000092462    UP000075840    UP000069272    UP000075881    UP000075884    UP000069940    UP000075885    UP000279307    UP000076858    UP000054359    UP000000305   

PRIDE

H9JII3   

Pfam

PF00640   PID        + More
PF13359   DDE_Tnp_4

Interpro

IPR006020   PTB/PI_dom        + More
IPR001202   WW_dom       
IPR011993   PH-like_dom_sf       
IPR036020   WW_dom_sf       
IPR039576   Fe65       
IPR036390   WH_DNA-bd_sf       
IPR011991   ArsR-like_HTH       
IPR027806   HARBI1_dom       

SUPFAM

SSF51045   SSF51045        + More
SSF46785   SSF46785       

Gene 3D

2.30.29.30    

CDD

cd00201  WW
cd00090  HTH_ARSR

ProteinModelPortal

H9JII3   A0A2H1WH57   A0A437BPJ2   A0A2A4JPS2   A0A194QD62   A0A0N1INW0   + More
A0A0L7KSL1   A0A1Y1M8A8   A0A1Y1M3Z0   A0A1Y1M4C0   A0A1Y1M415   A0A1Y1M4W8   A0A1Y1M9E9   A0A0T6B9K5   D2A105   A0A088AUF6   A0A310SE65   V9ICT6   A0A2P8YVC3   A0A0L7R2D3   A0A2A3ERJ5   K7IXF4   E2BZJ1   A0A151WLS5   A0A195B6C0   V9IBF6   E2A445   F4WL26   A0A0C9R655   A0A195CI61   A0A151J945   A0A1B6EF56   A0A195FBH5   A0A1B6DD44   A0A1B6CDF2   A0A1B6MUW8   A0A1B6MC25   U4UPN9   A0A0J7LA34   N6TST1   A0A158NZL6   A0A1B6IYB6   A0A2J7R4K9   A0A232FAJ2   A0A026W7W9   A0A1W4WR47   A0A154PL54   T1HF23   A0A2H8U058   J9K3V1   A0A0P4VWF5   E0VDP9   A0A146KZ07   A0A023F3E5   A0A067RHT1   A0A0A9X2N4   A0A1B0CKN9   A0A0A9YB99   A0A146LW99   Q17C69   A0A182RJQ9   A0A182W3V0   A0A1J1J6A7   A0A182LNC2   A0A1S4H412   A0A1B0DCI3   A0A182HXB6   A0A182FKB0   A0A0K8T7M1   A0A182K496   A0A0P4VYW9   A0A182NDN4   A0A182GZR8   T1J3F3   A0A0P6DQE4   A0A0P5YXE4   A0A0P5C7Q9   A0A182PSB5   A0A0P5MBA9   A0A0P5XGC3   A0A3L8D6N6   A0A162SLQ5   A0A0N8AVA2   A0A0P5WM83   A0A0P5PNL9   A0A0P6HKB0   A0A2L2YK26   A0A087TEB6   A0A0N8BL99   A0A0P5XWY2   E9GTU4   A0A0P5CHB0   A0A0P5C7Y9   A0A0P6D1T1   A0A0P5DCI7   A0A0N8EEG3   A0A0P6CUN5   A0A0P6GYB5   A0A0P5YBF6   A0A0P6BM69  

PDB

3D8F     E-value=2.9333e-41,     Score=425

KEGG

101743348    K04530 amyloid beta A4 precursor protein-binding family B member 2 | (RefSeq) amyloid beta A4 precur

GO

GO:0001540   GO:0006355   GO:0005737   GO:0005634   GO:0008134   GO:0016021   GO:0005515   GO:0007264   GO:0006413   GO:0005760   GO:0019012   GO:0051603   GO:0030145   GO:0006412   GO:0016876   GO:0043039  

PANTHER

PTHR14058  

Length:

534

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00213

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00300

outside

1  -  534

 

 

Pi

204.581191

Theta

176.947502

Tajima's D

1.025881

CLR

0.58425

CSRT

0.669066546672666

Interpretation

Uncertain