SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08523
Pre Gene Modal
BGIBMGA009367
Annotation
PREDICTED:_titin-like_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.984
 

Sequence

CDS
ATGTTTTGCTTAAGCAAAGAACTGAAAGTGTCAGAGCTGAAGCGACAGCGGCTCGGCTCGTCCCACGGCGCCGCGCCCCCCGCCCCGCCCCCCGCCCCGCCCGAGCCCATACACTTCCCGAGCTCGCTCACCGTCACCACGTCCACCAAGCCGCCGCTCGACAGAGCAGAATCCGTCCACACAGACGACTCCAAGTACAAACCCAACGTACTGAACAATTACACAGCGCGAAAGGATCTCGAGAAACCAGAAAGAAAAGAAGAGAAACTCAAAGACGATCTATACGTACCTCCCAACAGCATCGGCAGCATAACAATAACGCCCGTCGTCAATCAGAAAACAGAACCTAAACTCAAACAGGACAAAGGCGTGATTCGCGTGAGGTCGCCCGCCGCTCTCAACGATCTAGTTCAAAAAGAAGAAAAACCCAAAAAAATCGAAAAGAATCACACGAAAGACAAAATGGACGTACTGCACGTCGACACTTCGATCACGGTCAAGGAGGTTCCGAAACCCAACGAGGTGTCGCAGAAGCAGATCGAGAGCATGCGCATAGCCGAGAACAACATCCCCAGGCCGGCGCTGGTGCCCGTGCACCACTCGCCGACCTTCGCGAAGCCGGACAAGCGGCCCCCGGAGGTCAAGAAGAAGAAGGACGTGGTCATAGTGTCGGACCTGGACCCGCTGGCGGACAGCGCGCCGGAACCCCTGTCCGTCGACGACAGCAGCAGCGACGTCGAGCTCATCGAGGACAAAACCGAAAAAAGTGATAAGTGTGAAGTGCCTTCCAAGGACAAGAACTCGCAAAAGAAAATGCCGAACAAGAAAGTTGATACCGACAGACAGAAGAGCGACGAGGCCAACAAGGACATCGAGACTATTATAAGGACCATTAAACAGATGGAGCATTCTCAAGAACAATCGAAAATGAACAGTAGTAACTCGTACGGCGGGATACCAAACGCGAAGCAGGACAAGTCTGCCGGGCAACACTACTCGAGGGACTCGTTCTTCGCTGACGGCCGCTCCGCCAAAGACAAGTTCGCAGAACAAACTTTTTTAAAGAAAACGGATGGATGTAGTGACGCTCCCGATTCCCGCATCACGAATGAAGAGAAAACAAAATCATAA
Protein
MFCLSKELKVSELKRQRLGSSHGAAPPAPPPAPPEPIHFPSSLTVTTSTKPPLDRAESVHTDDSKYKPNVLNNYTARKDLEKPERKEEKLKDDLYVPPNSIGSITITPVVNQKTEPKLKQDKGVIRVRSPAALNDLVQKEEKPKKIEKNHTKDKMDVLHVDTSITVKEVPKPNEVSQKQIESMRIAENNIPRPALVPVHHSPTFAKPDKRPPEVKKKKDVVIVSDLDPLADSAPEPLSVDDSSSDVELIEDKTEKSDKCEVPSKDKNSQKKMPNKKVDTDRQKSDEANKDIETIIRTIKQMEHSQEQSKMNSSNSYGGIPNAKQDKSAGQHYSRDSFFADGRSAKDKFAEQTFLKKTDGCSDAPDSRITNEEKTKS

Summary

Pfam
PF08729   HUN        + More
PF14075   UBN_AB
Interpro
IPR026943   Ubinuclein-2        + More
IPR014840   HRD       
IPR026947   UBN_middle_dom       

Ontologies

GO

Topology

Length:
376
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00035
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00611
outside
1  -  376
 
 

Population Genetic Test Statistics

Pi
284.190022
Theta
221.822024
Tajima's D
1.782223
CLR
0.41445
CSRT
0.846257687115644
Interpretation
Uncertain
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