SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08521
Pre Gene Modal
BGIBMGA009367
Annotation
PREDICTED:_yemanuclein-alpha_[Plutella_xylostella]
Location in the cell
Nuclear   Reliability : 4.528
 

Sequence

CDS
ATGTCGGACCCTAAACGTGTTACTCTTATAACAGTGGGTGCTCCAAAAAGTGTGAAGAATAACGTGAGAAAAACAGTGAGATTAACCATAAATTTGGATGAAAGCAACGAAAGTAAATATCCGGAGCTGAATTACAGGGAACTAGTCATTGTAGAAGAGAGGAGGAAAAGACAAGAGAATGGAAAGACTGCCGGACTCGACCCGTTTTCGGACAACGATGACGACGTCGAAAGGGAGGCACGTAAATTTGAACAGAAATACGGAGGTAAAAGCACCTACGGCCGAAAGGGAAGGTCAAAAATGGACGAATTCGCCGACATCGGTGCTGGATACGATGAGACTGACTCGTTTATTGACAACACACATGGATACGATGAGATGATCCCGCCCGACCGCGACACTCTACACGGAGGGTTTTACATCAACTGCGGCGATTTGGAGTTCAAGAACCTGCCCAAGAACCAGCTGGCGACCTCGGACGGCGAGGCGGGCGGCAATCGAAGGAATAAAAGGCGGATATCGTCGAGTAGTAGCGAAGAGGACTCTTCAGAGAGCTCGTCGGAGTCGGAAAGCGCTGAAGAGAAAGACCCGAAGGTCATCGCTAATGGCGCCGTGGATTCACATAAGACTGAACATCGGAAAAAGAAAAACAAAAAGATCGATAAGAACAAAGCCAAGAAGGTTCGCAGGACTGACTCATCTGCGGCGACGTCAGGGAAACAGACCTCCGACGATAATGCCGGCGGCGACGCGGACAGCGGCGACTCGCGGAGCTCGCGCTCGGACTCGCTGGCCTCCAAGCCGCCGCCCAGCTCCGAGACCGCCGCCACCTCCGACAGCTCCAGGGACGTGGAAAGCAAGTGTGCGGTGGAGCTCCCCGCGAGCGTGACGGCCGTGCTGGACGCGATAGAGGCGGCCGTGGCGCAGCTGCCCCGCGCGCCCCCCGCACCCCCCGCGCTGCTGCTGCGCGCCGCGGAGACGCACGTCGCCAGGTACGCGCCGCACTACACTATAGTCACTACGGAGCCGATAGCCGTCGGAGCCCTGTGA
Protein
MSDPKRVTLITVGAPKSVKNNVRKTVRLTINLDESNESKYPELNYRELVIVEERRKRQENGKTAGLDPFSDNDDDVEREARKFEQKYGGKSTYGRKGRSKMDEFADIGAGYDETDSFIDNTHGYDEMIPPDRDTLHGGFYINCGDLEFKNLPKNQLATSDGEAGGNRRNKRRISSSSSEEDSSESSSESESAEEKDPKVIANGAVDSHKTEHRKKKNKKIDKNKAKKVRRTDSSAATSGKQTSDDNAGGDADSGDSRSSRSDSLASKPPPSSETAATSDSSRDVESKCAVELPASVTAVLDAIEAAVAQLPRAPPAPPALLLRAAETHVARYAPHYTIVTTEPIAVGAL

Summary

Pfam
PF08729   HUN        + More
PF14075   UBN_AB
Interpro
IPR026943   Ubinuclein-2        + More
IPR014840   HRD       
IPR026947   UBN_middle_dom       
PDB
4ZBJ     E-value=0.0301819,     Score=87

Ontologies

GO

Topology

Length:
349
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0008
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01612
outside
1  -  349
 
 

Population Genetic Test Statistics

Pi
285.784593
Theta
20.618909
Tajima's D
3.975166
CLR
0.357706
CSRT
0.998850057497125
Interpretation
Uncertain
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