Gene

KWMTBOMO08498

Annotation

PREDICTED:_hemicentin-1-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr14(-):10864753-10904313      View in EpiBrowser

Full name

Hemicentin-1      

Alternative Name

Fibulin-6

Location in the cell

Nuclear   Reliability : 2.503

CDS

ATGAAGGAGGAAAACGTGGGAACCTACACGTGTAATGCTGACAACGTTGCCGGCGTCAGTAGAATATTAGTCCGGGTGGTTCTTCTTGTGGACCCACCGGAGGTATTGATCGAACCAAAAAACAGAACTTTGGAAATCGGAGATGACCTCAACGTAACATGCACGGCGATCAGTGAGGCCTTGCTGCTGAAACATCGACTTATCTTCAAAGGGAAGGACTTTGAAAACTCGACGGATATTCATTTGGAGCCAAACATGGAAGGCTATTACGCTGCCAATATAATCATACGAAACGTGACAGAGAAGTATGCTGGAAACTACACCTGTCTAGCCAGTAATAGAGGTGGCGAAGCAAATCAAACAACGTACATAAAAATCAATGCAAAACCAAAATCCCGAATATTAGGTCCGCACACGCTGTCCCCACAACTGAACACTGATGTGCAGCTCGTGTGTCATGTCGACAACGCGGAGTCCGTGCAGTGGCTGGCTCCCAACGGGACTGCGGTGAGGGAGCGGTCCGTAGACCACAGCTCTGATGATGTTCTCGACGTGAGGAGTGTTAGTGAAGACGGTCAGTGGACGTGTGTGGCCCGTCGAGGATACCTTAATGTGTCAGATTCGGTGTCAATAAGCGTTCAAATTAAACCGAGGGTGACTATAATTGGATCCAAGAGCATCACCATATTAAATGGGACGGCCTATGACGTCACTTGTGAAGTACTAGCCAAGCCTGCCCCTAGAGTTGTATGGCACAGGGAGACAGAGAAGTTTCTGAACTGCAGCACGACACTGATTGCGTCTAATCTATATCGGAGCGTGCTGCGTCTGGACAGCAGCAAAGAGCCAGTGAACGGCACGTACTTCTGCTTCGGAGAGAACTCCGACGGTATATCCCAGGACAGCGTCGCCGTGCGCCTCCGGACACGGATGCGTCTGCGCCACGGATTCAGTAATACGCAATTACAATTGTATTCGCAAATGGATCTCCGATGTGACGTGGCTTCGCTTCCGGCGCCCGTAACGAGATGGTTCCACAACCGAACCGAGCTGCAGAACGACACCAACACGATCATCTCGAGCGACAACTCTTCTCTACATATCAACAGAATGGATTTCTCCAACTTCGGACGGTACACTTGTGTAGCCGACAATGGATATGAAACAATGTCAGTTGATGGCACTATGAGCGCAATTATAGTAGATCCACCGCGAGTGTCGATAGAGCCTGAAAACAAAACCATTGACGCTGGAGAGGATCTAAACGTGACATGCACGGTGGTCAGCGAAGCGTCGTTTCTTAAACACCGACTTGTCTTCAAAGGGGACAACTTCGAAAACTCCTCCGAAATACCCCCAGAACCGGGCACGGGAGGACGTCACTCTTTCAGTGTTATCATACACAACGTCACGGAGAAGTACACTGGGAACTATACGTGCTCAGCAATTAATGCAGGAGGTGAAACGAACAAAACAACCTACATCAAGATAAACCCAAAACTGAAATCCCAAATATTAGGTCCGCACGCGCTGTCCCCACAACTGAACACTGATGTGCAGCTCGTGTGTCATGTCGACAACGCGGAGTCCGTGCAGTGGCTGGCTCCCAACGGGACTGCGGTAAGGGAGCGGTCCGTGGACCACAGCTCTGATGACGTTTTCGACGTGAGGAGCGTTAGTGAAGATGGGCTGTGGACTTGTGTGGCCCGTCGAGGAAACCTTAATGTGTCAGATTCGGTGTCAATAAGCGTTCAAATTAAACCAAGGGTGACTATAATTGGATCCAAGAACATCACCATATTAAATGGGACGACCTATGACGTCACTTGTGAAGTACTAGCCAAGCCTCCTCCTAGAGTTCTATGGCACAGGGAGACAGAGAAGTTTCTGAACTGCAGCACGTCACTGATTGCGTCTAATCTATATCGGAGCGTGCTGCGTCTGGACAGCAGCAAGGAGTCAGTGAACGGCACGTACTTCTGCTTCGGAGAGAACTCCGACGGTATATCCCAGGACAGTGTCGCCGTGCGCGTCCGGACACGGATGCGTCTGCGCCACGGATTCAATAATACGCAATTACAATTGTATTCGCAAATGGATCTCCGATGTGACGTGGATTCCCTTCCGGCGCCCGTAACGAGATGGTTCCACAACCGAACCGAGCTGCAGAACGACACCAACACGATCATCTCGAGCGACAACTCGTCTCTACATATCAACAGAATGGATTTCTCCAACTTCGGACGGTACACTTGTGTAGCCAACAATGGATATGAAACAATGTCAGTTGATGGTACTATGAGCGCAATTATAGTAGATCCACCGCGAGTGTCGATAGAGCCTGAAAACAAAACCATTGACGCTGGAGAGGATCTGAACGTGACATGCACGGTGGTCAGCGAAGCGTCGTTTCTTAAACACCGACTGGTCTTCAAAGGGGACAACTTCGAAAACTCCTCCGAAATACCCCCAGAACCGGATACGGGAGGACGTCACTCTTTCAGTGTTATCATACGCAACGTCACGGAGAAGTACACTGGGAACTATACGTGCTCAGCAATTAATGCAGGAGGTGAAACGAACAAAACAACCTACATCAAGATAAACCCAAAACTGAAATCCCAAATATTAGGTCCGCACGCGCTGTTCCCACAACTGAACACTGATGTGCAGCTCGTGTGTCATGTCGACAACGCGGAGTCCGTGCAGTGGCTGGCTCCCAACGGGACTGCGGTAAGGGAGCGGTCCGTGGACCACAGCTCTGATGATGTTCTCGACGTGAGGAGCGTTAGTGAAGATGGGCTGTGGACTTGTGTGGCCCGTCGAGGAAACCTTAATGTGTCAGATTCGGTGTCAATAAGCGTTCAAATTAAACCAAGGGTGACTATAATTGGATTAAAGAACATTACCATATTAAATGGGACGACCTATGACGTCACATGTGAAGTACTAGCCAAGCCTCCTCCTAGAGTTCTATGGCACCGGGAGACAGATAAGTTTCTGAACTGCAGCACGTCACTGATTGCGTCTAATTTATATCGGAGCGTGCTGCGTCTGGACAGCAGCAAAGAGCCAGTGAACGGCACGTACTTCTGCTTCGGAGAGAACGCCGACGGTATATCCCAGGACAGCGTCGCCGTGCGCGTCCGGACACGGATGCGTCTGCGCCACGGATTCAATAATACGCAATTACAATTGTATTCGCAAATGGATCTCCGATGTGACGTGGATTCGCTTCCGGCGCCCGTAATGAGATGGTTCCACAACCGAACCGAGCTGCAGAACGACACCAACACGATCATCTCGAGCGACAACTCGTCTCTACATATCAACAGAATGGATTTCTCCAACTTCGGACGGTACACTTGTGTAGCCGACAATGGATATGAAACAATGTCAGTTGATGGCACTATGAGCGCAATTATAGTAGATCCTCCACGAGTGTCGATACAGCCTGAAAACAAAACCATTGACGCTGGAGAGGATCTGAACGTGACATGCACGGTGGTCAGCGAAGCGTCGTTTCTTAAACACCGACTGGTCTTCAAAGGGGACAACTTCGAAAACTCCTCCGAAATACCCCCAGAACCGGACACGGGGGGACGTCACTCTTTCAGTGTTATCATACGCAACGTCACGGAGAAGTACACTGGGAACTATACGTGCTCAGCAATTAATGCAGGAGGTGAAACGAACAAAACAACCTACATCAAGATAAACCCAAAACTGAAATCCCAAATATTAGGTCCGCACGCGCTGTCCCCACAACTGAACACTGATGTGCAGCTCGTGTGTCATGTCGACAACGCGGAGTCCGTGCAGTGGCTGGCTCCCAACGGGACTGTGGTGAGGAAGCGGTCCATGGACCACAGCTCTGATGACGTTCTGGACGTGAGGAGTGTTAGTGAAGATGGGCTGTGGACTTGTGTGGCCCGTCGAGGAAACCTTAATGTGTCAGATTCGGTGTTAATAAACGTTCAAATTAAACCGAGGGTGACTATAATTGGATCCAAGAACATTACCATAGTAAACGGCTCGACCTATGACGTCACTTGTGAAGTACTAGCCAAGCCTCCCCCTAGAGTTGTATGGCACAGGGAGACAGAGAAGTTTCTAAACTGCAGCACGTCACTGATGGTGTCTAATCTATATCGGAGCGTGCTGCGTCTGGACAGCAGCAAAGAGCCAGTGAACGGCACGTACTTCTGCTTCGGAGAGAACTCCGACGGTATATCCCAAGACAGCGTCTCCGTGCGCGTCCGGACACGGATGCGTCTGCGCCATGGATTCAATGATACGCAATTACAATTGTATTCGCAAATGGATCTCCGATGTGACGTGGATTCGCTTCCGGCGCCCGTAACGAGATGGTTCCACAACCGAACCGAGCTGCAGAACGACACCAACACGATCATCTCGAGCGACAACTCTTCTCTACATATCAACAGAATGGATTTCTCCAACTTCGGACGGTACACTTGTGTAGCCGACAATGGATATGAAACAATGTCAGTTGATGCTACAGTAACGGTCACTGGGTTAGAATTTCCCGTAATATCGAAAAGGATCAAGAGCCAGGCTGTCCGTAAAGGAAATTCAACAGATATCACATGTAGTGTCTTAAAAGGAAGTCCGGTTCCAACTATAACGTGGATGTACAAAAACGATACTACGAATGGATTCGTCAACTTGCCCACGGACGGTATCGATCGGGGAAATTTAAGTATTTCAAATGTCACGTTGGAACATTCTGGCATCTATAGATGTGTCGCTGAAAACGTTATAGGACAAGATACGCACAAAATCGAATTGGTGGTTCAGTATGCTCCTCAATTGGCTCCACTGATAGGTGAGGTAGGAGACGGGCCACGCGTAGTAGAAGTCGGTAAACGAGTTGTGTTCTCGTGTAACGTAACTGGCTTCCCTCCGCCGGTCGTAGTGTGGACGAGAAATGGACTACCCGTTGTTTATTCGAAAAATGTCCATTTAAATGAATCCCAAGCTTTGATAATAGAAAATGCGACAGACCACGAAGCCGGCTCGTACATTTGCAATGCGACCAGCGCGCTGGGATCGACTCACAGAAATTTCACGCTCAAAGTTTATGTGAGTCCAAAGATCTTACCGATAAATTCGGAACCTATACAGCAATTCTTAGAAGGCCAACTGGTAGAGTTGCCGTGTAAATCAAAGGGCCTGCCGGTGCCGCGGGTGGAGTGGACCCACAACGGAGACACGATACTTGATGATAAAAGACACATCGACGAAGATGGACTTAGGTTCGTGGCGAATATAACGGACTTCGGGAATTACACGTGTGTTGCCAGGAATGAATATGGAAGCGATTCGATATCGTATTCTTTGTTTATTTGGGTGACACCGAGAATAGAGCCTCCGCTTGAGACGATGAAACAAGTACTGTCAGGTGACAATGTGACGTTACAGTGTGACGTCATGGGCTTCCCCATCCCTAATGTAATATGGGAGTATGAAGGGAAATCTCTCACTGAAAATACAACAACGTTAAGGTAA

Protein

MKEENVGTYTCNADNVAGVSRILVRVVLLVDPPEVLIEPKNRTLEIGDDLNVTCTAISEALLLKHRLIFKGKDFENSTDIHLEPNMEGYYAANIIIRNVTEKYAGNYTCLASNRGGEANQTTYIKINAKPKSRILGPHTLSPQLNTDVQLVCHVDNAESVQWLAPNGTAVRERSVDHSSDDVLDVRSVSEDGQWTCVARRGYLNVSDSVSISVQIKPRVTIIGSKSITILNGTAYDVTCEVLAKPAPRVVWHRETEKFLNCSTTLIASNLYRSVLRLDSSKEPVNGTYFCFGENSDGISQDSVAVRLRTRMRLRHGFSNTQLQLYSQMDLRCDVASLPAPVTRWFHNRTELQNDTNTIISSDNSSLHINRMDFSNFGRYTCVADNGYETMSVDGTMSAIIVDPPRVSIEPENKTIDAGEDLNVTCTVVSEASFLKHRLVFKGDNFENSSEIPPEPGTGGRHSFSVIIHNVTEKYTGNYTCSAINAGGETNKTTYIKINPKLKSQILGPHALSPQLNTDVQLVCHVDNAESVQWLAPNGTAVRERSVDHSSDDVFDVRSVSEDGLWTCVARRGNLNVSDSVSISVQIKPRVTIIGSKNITILNGTTYDVTCEVLAKPPPRVLWHRETEKFLNCSTSLIASNLYRSVLRLDSSKESVNGTYFCFGENSDGISQDSVAVRVRTRMRLRHGFNNTQLQLYSQMDLRCDVDSLPAPVTRWFHNRTELQNDTNTIISSDNSSLHINRMDFSNFGRYTCVANNGYETMSVDGTMSAIIVDPPRVSIEPENKTIDAGEDLNVTCTVVSEASFLKHRLVFKGDNFENSSEIPPEPDTGGRHSFSVIIRNVTEKYTGNYTCSAINAGGETNKTTYIKINPKLKSQILGPHALFPQLNTDVQLVCHVDNAESVQWLAPNGTAVRERSVDHSSDDVLDVRSVSEDGLWTCVARRGNLNVSDSVSISVQIKPRVTIIGLKNITILNGTTYDVTCEVLAKPPPRVLWHRETDKFLNCSTSLIASNLYRSVLRLDSSKEPVNGTYFCFGENADGISQDSVAVRVRTRMRLRHGFNNTQLQLYSQMDLRCDVDSLPAPVMRWFHNRTELQNDTNTIISSDNSSLHINRMDFSNFGRYTCVADNGYETMSVDGTMSAIIVDPPRVSIQPENKTIDAGEDLNVTCTVVSEASFLKHRLVFKGDNFENSSEIPPEPDTGGRHSFSVIIRNVTEKYTGNYTCSAINAGGETNKTTYIKINPKLKSQILGPHALSPQLNTDVQLVCHVDNAESVQWLAPNGTVVRKRSMDHSSDDVLDVRSVSEDGLWTCVARRGNLNVSDSVLINVQIKPRVTIIGSKNITIVNGSTYDVTCEVLAKPPPRVVWHRETEKFLNCSTSLMVSNLYRSVLRLDSSKEPVNGTYFCFGENSDGISQDSVSVRVRTRMRLRHGFNDTQLQLYSQMDLRCDVDSLPAPVTRWFHNRTELQNDTNTIISSDNSSLHINRMDFSNFGRYTCVADNGYETMSVDATVTVTGLEFPVISKRIKSQAVRKGNSTDITCSVLKGSPVPTITWMYKNDTTNGFVNLPTDGIDRGNLSISNVTLEHSGIYRCVAENVIGQDTHKIELVVQYAPQLAPLIGEVGDGPRVVEVGKRVVFSCNVTGFPPPVVVWTRNGLPVVYSKNVHLNESQALIIENATDHEAGSYICNATSALGSTHRNFTLKVYVSPKILPINSEPIQQFLEGQLVELPCKSKGLPVPRVEWTHNGDTILDDKRHIDEDGLRFVANITDFGNYTCVARNEYGSDSISYSLFIWVTPRIEPPLETMKQVLSGDNVTLQCDVMGFPIPNVIWEYEGKSLTENTTTLR

Description

Promotes cleavage furrow maturation during cytokinesis in preimplantation embryos (PubMed:21215633). May play a role in the architecture of adhesive and flexible epithelial cell junctions (PubMed:17015624). May play a role during myocardial remodeling by imparting an effect on cardiac fibroblast migration (PubMed:24951538).

Keywords

Alternative splicing   Basement membrane   Calcium   Cell cycle   Cell division   Cell junction   Complete proteome   Cytoplasm   Disulfide bond   EGF-like domain   Extracellular matrix   Glycoprotein   Reference proteome   Repeat   Secreted   Signal  

Feature

chain  Hemicentin-1
splice variant  In isoform 2.

Uniprot

H9JIJ3   A0A1S3PI86   A0A1S3PI68   E7F3V2   F6RH77   G1PVR0   + More
A0A1L8GNR0   A0A3P9AE33   A0A452FS37   U3IV84   M3X1M2   F1M4Q3   A0A2K5K644   A0A2K5K656   A0A2Y9JST8   A0A340WQW6   F6TQY1   W5P565   A0A1U7UYH7   R0KZP0   A0A0D9RKF6   A0A3Q2GH42   A0A3Q7T881   G1T5K0   E1BE11   A0A2U3XHM7   M3YKJ2   A0A2Y9PQD3   F1PXF9   A0A2Y9GGI7   A0A099ZVY6   A0A384CL93   G1LSN3   D3YXG0-2   D3YXG0   A0A2U4CQ22   A0A3Q7XQ40   F6QWR8   G1LSN4   A0A1S3FKW3   A0A2Y9TH90   H0VAJ3   H0WC62   A0A341BXZ8   H0XAK9   D2I5A7   A0A3Q7PIR6   A0A2K6BJK2   A0A383YVW7   G3QH37   A0A2I3MCW5   A0A2U3WBH9   A0A2K6BJH9   A0A1V4JZF2   A0A3Q3L4X2   L5KZE1   A0A096NP62   A0A151MFI7   A0A2I4B4G3   A0A2I4B4D6   H2N4D8   A0A091JRU4   A0A2I3SUI4   A0A2J8V894   A0A2R8ZPW9   A0A151MFJ9   A0A1V4JZI6   A0A091V0J0   G3RN13   A0A2K5SD05   A0A093JMS3   F7HTR8   A0A1U7S3W1   H3ADQ7   A0A1S3NJZ2   A0A2D0T6P7   A0A1S3NJZ4   A0A146YLE1   A0A3B4E5X1   A0A093KQT9   A0A091GDU5   A0A1D5PWR7   A0A1D5PQF5   A0A3B3RV35   A0A0P7X0M9   A0A1D5PY27   A0A1D5PMN5   G1MRA1   A0A1D5NYH4   A0A3Q2Q6M6   A0A3Q3AIK5   A0A2K6RDJ1   A0A2U9C6G6  

Pubmed

19121390    23594743    20431018    21993624    27762356    25069045    + More
23749191    17975172    15057822    16641100    19892987    20809919    19393038    16341006    20010809    19468303    17015624    21183079    21215633    24951538    17495919    22398555    23258410    22293439    16136131    22722832    9215903    15592404    29240929    20838655    25362486   

EMBL

BABH01027071    BABH01027072    BABH01027073    BABH01027074    BABH01027075    BABH01027076    + More
BABH01027077    BABH01027078    BABH01027079    BABH01027080    BX548021    CR391979    CR457445    AAMC01026251    AAMC01026252    AAMC01026253    AAMC01026254    AAMC01026255    AAMC01026256    AAMC01026257    AAPE02019958    AAPE02019959    AAPE02019960    CM004472    OCT85460.1    LWLT01000016    ADON01133373    ADON01133374    ADON01133375    ADON01133376    AANG04001043    AABR07021361    AABR07021362    AABR07021363    AABR07021364    AABR07021365    AABR07021366    AABR07021367    AABR07021368    AABR07021369    AABR07021370    AMGL01022558    AMGL01022559    AMGL01022560    AMGL01022561    AMGL01022562    AMGL01022563    AMGL01022564    AMGL01022565    AMGL01022566    AMGL01022567    KB744663    EOA94654.1    AQIB01112956    AQIB01112957    AQIB01112958    AQIB01112959    AQIB01112960    AQIB01112961    AAGW02054358    AAGW02054359    AAGW02054360    AAGW02054361    AAGW02054362    AAGW02054363    AEYP01068968    AEYP01068969    AEYP01068970    AEYP01068971    AEYP01068972    AEYP01068973    AEYP01068974    AEYP01068975    AEYP01068976    AEYP01068977    AAEX03005163    AAEX03005164    KL869911    KGL86449.1    ACTA01076587    ACTA01084587    ACTA01092587    ACTA01100587    ACTA01108587    ACTA01116587    ACTA01124587    ACTA01132587    ACTA01140587    ACTA01148586    AC111145    AC113326    AC115051    AC124120    AAKN02018452    AAKN02018453    AAKN02018454    AAKN02018455    AAKN02018456    AAKN02018457    AAKN02018458    AAKN02018459    AAKN02018460    AAQR03037752    AAQR03037753    AAQR03037754    AAQR03037755    AAQR03037756    AAQR03037757    AAQR03037758    AAQR03037759    AAQR03037760    AAQR03037761    GL194636    EFB23306.1    CABD030007797    CABD030007798    CABD030007799    CABD030007800    CABD030007801    CABD030007802    CABD030007803    CABD030007804    CABD030007805    CABD030007806    AHZZ02017566    AHZZ02017567    AHZZ02017568    AHZZ02017569    LSYS01005418    OPJ77524.1    KB030474    ELK16173.1    AKHW03006215    KYO23292.1    ABGA01049740    ABGA01049741    ABGA01049742    ABGA01049743    ABGA01049744    ABGA01049745    ABGA01049746    ABGA01049747    ABGA01049748    ABGA01049749    KK501365    KFP14341.1    AACZ04056152    AACZ04056153    AACZ04056154    NDHI03003429    PNJ53742.1    AJFE02052069    AJFE02052070    AJFE02052071    AJFE02052072    AJFE02052073    AJFE02052074    AJFE02052075    KYO23291.1    OPJ77523.1    KL410290    KFQ95785.1    KL206226    KFV80044.1    AFYH01199621    AFYH01199622    AFYH01199623    AFYH01199624    AFYH01199625    AFYH01199626    AFYH01199627    AFYH01199628    AFYH01199629    AFYH01199630    GCES01032046    JAR54277.1    KK590748    KFV99920.1    KL448046    KFO79531.1    AADN05000650    JARO02003647    KPP70078.1    CP026254    AWP10692.1   

Proteomes

UP000005204    UP000087266    UP000000437    UP000008143    UP000001074    UP000186698    + More
UP000265140    UP000291000    UP000016666    UP000011712    UP000002494    UP000233080    UP000248482    UP000265300    UP000002281    UP000002356    UP000189704    UP000029965    UP000265020    UP000286640    UP000001811    UP000009136    UP000245341    UP000000715    UP000248483    UP000002254    UP000248481    UP000053858    UP000261680    UP000008912    UP000000589    UP000245320    UP000286642    UP000002280    UP000081671    UP000248484    UP000005447    UP000252040    UP000005225    UP000286641    UP000233120    UP000261681    UP000001519    UP000028761    UP000245340    UP000190648    UP000261640    UP000010552    UP000050525    UP000192220    UP000001595    UP000053119    UP000002277    UP000240080    UP000053283    UP000233040    UP000053584    UP000008225    UP000189705    UP000008672    UP000221080    UP000261440    UP000053760    UP000000539    UP000261540    UP000034805    UP000001645    UP000265000    UP000233200    UP000246464   

PRIDE

H9JIJ3    F1M4Q3    F1PXF9    D3YXG0    A0A1D5PWR7   

Pfam

PF07679   I-set        + More
PF00047   ig
PF00090   TSP_1
PF07645   EGF_CA
PF12662   cEGF
PF07474   G2F
PF13895   Ig_2

Interpro

IPR013783   Ig-like_fold        + More
IPR013151   Immunoglobulin       
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR013098   Ig_I-set       
IPR001881   EGF-like_Ca-bd_dom       
IPR036383   TSP1_rpt_sf       
IPR000884   TSP1_rpt       
IPR000152   EGF-type_Asp/Asn_hydroxyl_site       
IPR036179   Ig-like_dom_sf       
IPR000742   EGF-like_dom       
IPR003598   Ig_sub2       
IPR013032   EGF-like_CS       
IPR018097   EGF_Ca-bd_CS       
IPR013106   Ig_V-set       
IPR036465   vWFA_dom_sf       
IPR009030   Growth_fac_rcpt_cys_sf       
IPR009017   GFP       
IPR006605   G2_nidogen/fibulin_G2F       
IPR026823   cEGF       
IPR016130   Tyr_Pase_AS       
IPR032984   Hemicentin-2       
IPR006573   NHR_dom       

SUPFAM

SSF48726   SSF48726        + More
SSF82895   SSF82895       
SSF54511   SSF54511       
SSF57184   SSF57184       
SSF53300   SSF53300       

Gene 3D

2.20.100.10     2.60.40.10     3.40.50.410    

CDD

cd00255  nidG2

ProteinModelPortal

H9JIJ3   A0A1S3PI86   A0A1S3PI68   E7F3V2   F6RH77   G1PVR0   + More
A0A1L8GNR0   A0A3P9AE33   A0A452FS37   U3IV84   M3X1M2   F1M4Q3   A0A2K5K644   A0A2K5K656   A0A2Y9JST8   A0A340WQW6   F6TQY1   W5P565   A0A1U7UYH7   R0KZP0   A0A0D9RKF6   A0A3Q2GH42   A0A3Q7T881   G1T5K0   E1BE11   A0A2U3XHM7   M3YKJ2   A0A2Y9PQD3   F1PXF9   A0A2Y9GGI7   A0A099ZVY6   A0A384CL93   G1LSN3   D3YXG0-2   D3YXG0   A0A2U4CQ22   A0A3Q7XQ40   F6QWR8   G1LSN4   A0A1S3FKW3   A0A2Y9TH90   H0VAJ3   H0WC62   A0A341BXZ8   H0XAK9   D2I5A7   A0A3Q7PIR6   A0A2K6BJK2   A0A383YVW7   G3QH37   A0A2I3MCW5   A0A2U3WBH9   A0A2K6BJH9   A0A1V4JZF2   A0A3Q3L4X2   L5KZE1   A0A096NP62   A0A151MFI7   A0A2I4B4G3   A0A2I4B4D6   H2N4D8   A0A091JRU4   A0A2I3SUI4   A0A2J8V894   A0A2R8ZPW9   A0A151MFJ9   A0A1V4JZI6   A0A091V0J0   G3RN13   A0A2K5SD05   A0A093JMS3   F7HTR8   A0A1U7S3W1   H3ADQ7   A0A1S3NJZ2   A0A2D0T6P7   A0A1S3NJZ4   A0A146YLE1   A0A3B4E5X1   A0A093KQT9   A0A091GDU5   A0A1D5PWR7   A0A1D5PQF5   A0A3B3RV35   A0A0P7X0M9   A0A1D5PY27   A0A1D5PMN5   G1MRA1   A0A1D5NYH4   A0A3Q2Q6M6   A0A3Q3AIK5   A0A2K6RDJ1   A0A2U9C6G6  

PDB

3DMK     E-value=2.59109e-28,     Score=318

KEGG

105841279    no KO assigned | (RefSeq) hemicentin-1-like

GO

GO:0005509   GO:0030017   GO:0030241   GO:0030018   GO:0031430   GO:0055008   GO:0030198   GO:0006936   GO:0008307   GO:0030240   GO:0051371   GO:0043589   GO:0071688   GO:0051015   GO:0045214   GO:0005865   GO:0055003   GO:0048739   GO:0035122   GO:0090497   GO:0007157   GO:0038023   GO:0007156   GO:0071711   GO:0005913   GO:0050839   GO:0042803   GO:0033334   GO:0009617   GO:0030054   GO:0005604   GO:0005938   GO:0050808   GO:0032589   GO:0016021   GO:0032154   GO:0062023   GO:0051301   GO:0007049   GO:0005576   GO:0005201   GO:0004725   GO:0005515   GO:0005634   GO:0007067   GO:0006508   GO:0019012   GO:0051603   GO:0030145   GO:0006412   GO:0016876   GO:0043039  

PANTHER

PTHR45889:SF4  

Subcellular location

Secreted   The antibody used in PubMed:17015624 and PubMed:21215633 to determine subcellular location does not distinguish between HMCN1 and HMCN2.   With evidence from 7 publications.
Extracellular space   The antibody used in PubMed:17015624 and PubMed:21215633 to determine subcellular location does not distinguish between HMCN1 and HMCN2.   With evidence from 7 publications.
Extracellular matrix   The antibody used in PubMed:17015624 and PubMed:21215633 to determine subcellular location does not distinguish between HMCN1 and HMCN2.   With evidence from 7 publications.
Basement membrane   The antibody used in PubMed:17015624 and PubMed:21215633 to determine subcellular location does not distinguish between HMCN1 and HMCN2.   With evidence from 7 publications.
Cytoplasm   The antibody used in PubMed:17015624 and PubMed:21215633 to determine subcellular location does not distinguish between HMCN1 and HMCN2.   With evidence from 7 publications.
Cell junction   The antibody used in PubMed:17015624 and PubMed:21215633 to determine subcellular location does not distinguish between HMCN1 and HMCN2.   With evidence from 7 publications.
Cleavage furrow   The antibody used in PubMed:17015624 and PubMed:21215633 to determine subcellular location does not distinguish between HMCN1 and HMCN2.   With evidence from 7 publications.

Length:

1843

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0104899999999999

Exp number, first 60 AAs:

0.00814

Total prob of N-in:

0.00050

outside

1  -  1843

 

 

Pi

269.912236

Theta

161.450871

Tajima's D

2.783942

CLR

0.3634

CSRT

0.968701564921754

Interpretation

Uncertain