Gene

KWMTBOMO08496

Pre Gene Modal

BGIBMGA009356

Annotation

PREDICTED:_uncharacterized_protein_LOC101736307_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr14(+):10833944-10836970      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.506

CDS

ATGCAAGAAGAACTACGCAAACCAGAATACCCATGGGATCATGACGATGCTCTGTCTAGAGAAAGCTCTAAACACAAACAACTCTTAGACGCTATAGATACTTTGAAGGAGCAACTTCCGTTATTGAAGGAGAAAATTAAAAATGCAAAAATGTGCGGTCCTGATTGTAAACTGAAACATGACGATTTAAATATAAATTTAGATCTTTTAACCCCGGCAGAACTGTTGCGTACAGTGAAAAGATTTGAAAGGCTCAAAACTGATTTGATAAGTACACTGCGCAGTAAAGAATGGCGTTTGGATTCGGAGTCAAAGCTGTTCGTGAGAGTGAACGATCAACGGACATATTTACAAAACGAGTTGATGATATGCCAGAACAATATCATGAGACTGCAAAAGAATGGAGGGTATTGGCAGAATTTTACTCGGAAGAATGACGAAAGAGTGTTCGACCCAAAGCGGGGACCAATAAAGAAGATGATTGGTAACGAACTATTGCCGCCTATAACGACTTAG

Protein

MQEELRKPEYPWDHDDALSRESSKHKQLLDAIDTLKEQLPLLKEKIKNAKMCGPDCKLKHDDLNINLDLLTPAELLRTVKRFERLKTDLISTLRSKEWRLDSESKLFVRVNDQRTYLQNELMICQNNIMRLQKNGGYWQNFTRKNDERVFDPKRGPIKKMIGNELLPPITT

Uniprot

A0A194Q7P3   S4NXC0   A0A2A4JJU5   A0A2H1VB34   A0A2W1BHB0   A0A3S2NR02   + More
A0A2P6KIQ5   A0A1V9XZP3   A0A087TX08   R7UQK9   A0A3M6UBG7   A0A2G8LPT7   A0A2B4RRE2   A0A2T7PLU9   A0A131XTW9   A0A131XPF2   A0A1I8HTG9   A0A1I8FUN8   B7P948   V5GUX9   G3MQ73   A0A1E1WYS8   A0A1E1XSJ7   C3XXM9   A0A210QE62   A0A3S1A857   V4AZC2   A7SE60   K7F3H6   A0A1S3IXN2  

Pubmed

26354079    23622113    28756777    28327890    23254933    30382153    + More
29023486    28049606    26392545    25765539    22216098    28503490    29209593    18563158    28812685    17615350    17381049   

EMBL

KQ459337    KPJ01409.1    GAIX01014240    JAA78320.1    NWSH01001280    PCG71864.1    + More
ODYU01001595    SOQ38037.1    KZ150210    PZC72206.1    RSAL01000133    RVE46323.1    MWRG01010958    PRD26208.1    MNPL01001681    OQR78913.1    KK117137    KFM69647.1    AMQN01006610    KB298735    ELU08814.1    RCHS01001883    RMX50889.1    MRZV01000016    PIK62241.1    LSMT01000391    PFX18812.1    PZQS01000003    PVD34405.1    GEFM01006118    JAP69678.1    GEFH01000553    JAP68028.1    NIVC01001853    NIVC01000886    NIVC01000448    PAA63349.1    PAA75414.1    PAA82810.1    ABJB010973418    DS661587    EEC03120.1    GANP01010253    JAB74215.1    JO844024    AEO35641.1    GFAC01006998    JAT92190.1    GFAA01001142    JAU02293.1    GG666471    EEN67489.1    NEDP02004037    OWF47035.1    RQTK01000185    RUS85030.1    KB201166    ESO99076.1    DS469635    EDO37982.1    AGCU01068306    AGCU01068307    AGCU01068308   

Proteomes

UP000053268    UP000218220    UP000283053    UP000192247    UP000054359    UP000014760    + More
UP000275408    UP000230750    UP000225706    UP000245119    UP000095280    UP000215902    UP000001555    UP000001554    UP000242188    UP000271974    UP000030746    UP000001593    UP000007267    UP000085678   

Pfam

PF15372   DUF4600        + More
PF17917   RT_RNaseH
PF00078   RVT_1
PF00010   HLH

Interpro

IPR028022   DUF4600        + More
IPR012337   RNaseH-like_sf       
IPR041373   RT_RNaseH       
IPR000477   RT_dom       
IPR036397   RNaseH_sf       
IPR001067   Nuc_translocat       
IPR011598   bHLH_dom       
IPR036638   HLH_DNA-bd_sf       

SUPFAM

SSF53098   SSF53098        + More
SSF47459   SSF47459       

Gene 3D

3.30.420.10     4.10.280.10    

CDD

cd00083  HLH

ProteinModelPortal

A0A194Q7P3   S4NXC0   A0A2A4JJU5   A0A2H1VB34   A0A2W1BHB0   A0A3S2NR02   + More
A0A2P6KIQ5   A0A1V9XZP3   A0A087TX08   R7UQK9   A0A3M6UBG7   A0A2G8LPT7   A0A2B4RRE2   A0A2T7PLU9   A0A131XTW9   A0A131XPF2   A0A1I8HTG9   A0A1I8FUN8   B7P948   V5GUX9   G3MQ73   A0A1E1WYS8   A0A1E1XSJ7   C3XXM9   A0A210QE62   A0A3S1A857   V4AZC2   A7SE60   K7F3H6   A0A1S3IXN2  

KEGG

101736307    no KO assigned | (RefSeq) uncharacterized LOC101736307

GO

GO:0004527   GO:0003676   GO:0003700   GO:0005667   GO:0005634   GO:0005737   GO:0046983  

PANTHER

PTHR28671  

Length:

171

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.13519

outside

1  -  171

 

 

Pi

269.48748

Theta

171.537899

Tajima's D

1.844674

CLR

0.107575

CSRT

0.856357182140893

Interpretation

Uncertain