Gene

KWMTBOMO08495

Pre Gene Modal

BGIBMGA009344

Annotation

putative_cuticle_protein_CPH41_[Bombyx_mori]

Location

Bomo_Chr14(-):10823826-10832583      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.072

CDS

ATGAGTCTAGTAAGTTGTGCAGTTTCAGAAGAAGCCAACAAAATTAATAGTGATAATGTAAAGAAATATCAACATGAACTTTTACCGAAACTGAAGGATTTGACTGAGCGAGTACAACTTTTATCGTGGGCTCTCCAACAGAATGTGATAGATACATACATTAATTACACTGTAACGAAGAGTCTAGAACAATTGAATTTTAAAAGTCGTAAATTGAAAATTGATAATGACTATAATACACTAGAAGAAGAATTAAGAACTTTCACTGAAGATTTTAATGATAACGATGGAATTATGAAGAACGCGGAAGCATTGCACAAATCCTACCATATTTTAAAGGATTTATGTGTTTTAGGGGAAGCTAAAAGTGTTATAAATCGAGCAAATCACGAATTTAACAGATATAACTATTCTGAAGCAATGTTGTCTTTAAAAAACTTAAAAGGTCAGTTAGATAATGTTAAAGCGGATGGGAATGTTGCTAAAGTAGTTCTTAACTTATATGATCATGTTGAGAATCAACTAGCACTTTTTACCGCGCATTTAAGCATTGAATGGGAAGACGTATTCACTTGGAGCGAGAAAAAAGGTTTAAATTTCTTGATTTACTCATTATCAGTGCAACAAAGTGATCAGGTGCTGTTACAGAGGATCTTAAATACATTGTATGTTACTGACAGAATGAAGGCTGAGCTCTGGTCTTTCTCTGATTTCTTCATAAATAAACTAGTACATAATGTTATAAGACATAATTGTGATATATTTACTGAAGATCACATTGGTGCTATAGTCTTCAACATAAAGATTGATTTAAGTGACAACACTAAGCCAAATTATCAAACCATATTTAACAACTTAACTGCCATATTTGAATTTCTGCAATCAACATTAGGTTCTCAGTTTCAAAGCGATGAGACATTCACTCAGATATTTGCAAAGTCAATAAAAAGTGATTTCTTTGATAAAATTATAGAAGACTGTGTAAGAAGTAATTTGCAGTCTTATGATGGCAGCTATCAAAGTTACAAAAACATTGTCATAGAACTTGATTCGTTCAATAAATTTTTAATTGAAATTAAATTTGTCGATCCCGATGATTCACCTCTGAACAGCTACATAGAGAACACAGAATGTTTACTTTACAACAAGAAATGTGAAAAGTTATTGATCAACGTTAGAAGTTTAATTTCCCAGAGTTTATCATATGATTCAATTGAAGTAGGCTCCACATTAAATGACAATAAGACAGATCAATCTAATAATGAAATACCATGGGATCTAAATGCACCAGTATACTTACCAAAATGTATGATTTCACGAAATGTTAAAACAATAATGACACTGATAAAGGATCATTTGGAAGAAAGCTCAAAACTTCCAGAAAAGTACAGTATGAAGTTTGTGTCTTATATTAAAGATATTGCAGTAATGTATCAATGTGTTGTACCAAGAAAATTCAAAATTAACTTGGAAAGCTGCCCATCTGATATTGCACTATTCTTTAATAACTGCTACTATCTGGCACATGGGCTTGTTGGCCCACCATGGTGTACGACTCTCCCACAGGACTTAGCTGATCGTCTTGTACTGGTACTCTTTGAATGCATCCAAGATCTTAGAGTTTTGGGATTGGAGAAGCTATCACTGTACTTACAACAACAGAAAACTGTTATTCAAGAGGGCATTCAGCCTAAAGAATCAACATCTTGGACCCATGAAGAGTTTGAGCACTTTGACTGTGGTATCAATCGAGCTATGACCCTAATGAAAGAACTAAAGACCTCATGGCTCCACATACTGCCGTCTCGGATGTACGTTATGTCTATGTGTACCCTTATTGAGGTTTTATGTGAAACTGTATTAAACCGTATTTTCTGCGACATCAAGCATGTCAGTGAAGATTTGGTATACTTGATTGCCACTAGAATTGAGGATACTTTAGAGGAAGTTGTCACATTGTTTGAGGAACCAATTGAATTAGAAGAACAAATATCTATTTGGATAAAGTTTTCAAGAATGCCCCTGTTACTGAAGGCCCAACTTCTAGAAATTTCCGAACTATGGAACAAGGATCGTGAATTATTCAGCGATTACACTTGCGAGGAATTCAGACATGTCGTGAAAATGCGCTTCGCCGATGATAAATATAGATTGAAAATATTGAAAGAAATACAATAA

Protein

MSLVSCAVSEEANKINSDNVKKYQHELLPKLKDLTERVQLLSWALQQNVIDTYINYTVTKSLEQLNFKSRKLKIDNDYNTLEEELRTFTEDFNDNDGIMKNAEALHKSYHILKDLCVLGEAKSVINRANHEFNRYNYSEAMLSLKNLKGQLDNVKADGNVAKVVLNLYDHVENQLALFTAHLSIEWEDVFTWSEKKGLNFLIYSLSVQQSDQVLLQRILNTLYVTDRMKAELWSFSDFFINKLVHNVIRHNCDIFTEDHIGAIVFNIKIDLSDNTKPNYQTIFNNLTAIFEFLQSTLGSQFQSDETFTQIFAKSIKSDFFDKIIEDCVRSNLQSYDGSYQSYKNIVIELDSFNKFLIEIKFVDPDDSPLNSYIENTECLLYNKKCEKLLINVRSLISQSLSYDSIEVGSTLNDNKTDQSNNEIPWDLNAPVYLPKCMISRNVKTIMTLIKDHLEESSKLPEKYSMKFVSYIKDIAVMYQCVVPRKFKINLESCPSDIALFFNNCYYLAHGLVGPPWCTTLPQDLADRLVLVLFECIQDLRVLGLEKLSLYLQQQKTVIQEGIQPKESTSWTHEEFEHFDCGINRAMTLMKELKTSWLHILPSRMYVMSMCTLIEVLCETVLNRIFCDIKHVSEDLVYLIATRIEDTLEEVVTLFEEPIELEEQISIWIKFSRMPLLLKAQLLEISELWNKDRELFSDYTCEEFRHVVKMRFADDKYRLKILKEIQ

Uniprot

D0VEQ2   A0A2H1VB58   A0A2W1BEG7   A0A2A4JID7   A0A212FC93   A0A194Q8W0   + More
A0A2Z5U748   A0A0L7L0Q8   A0A437B763   A0A1E1WK00   A0A194PVK0   A0A2W1BEN9   A0A212EP10   A0A0N1PFC5   A0A067R1H8   A0A437BGP5   A0A2H1VMR4   H9J8F6   K7IZY4   A0A2J7R4X7   A0A0C9R7R5   A0A232F9F2   A0A2J7R4Y7   A0A3L8DW78   D6WSG2   A0A1B6K948   A0A1B6DLN4   E2AR01   A0A088ADK1   A0A0L7LNX8   E2C1W0   A0A1B6HJZ5   A0A423TXK0   A0A210QXB8   A0A195CIN0   B7Q3G5   A0A158NYR6   F4WFS7   W4XLH6   A0A131XXS9   E0VWF2   A0A151JRX3   A0A0L7RGC3   A0A026WMT4   A0A2C9LLH4   A0A2C9LLF9   A0A023EY20   A0A293MPL1   E9IYQ5   A0A0V0GA94   A0A1E1XDT8   A0A2R5L8Y8   A0A2P6K5G4   A0A131YQJ5   A0A0P4W4M1   A0A224YTD2   A0A091WUP7   A0A091J057   G3ILM5   A0A091FFU8   A0A2K5PQ56   A0A401RYD7   L7MH70   A0A2K5PQ47  

Pubmed

19121390    28756777    22118469    26354079    26227816    24845553    + More
20075255    28648823    30249741    18362917    19820115    20798317    28812685    21347285    21719571    20566863    24508170    15562597    25474469    21282665    28503490    26830274    28797301    21804562    30297745    25576852   

EMBL

BABH01027068    BABH01027069    BABH01027070    GU070726    ACY06936.1    ODYU01001595    + More
SOQ38036.1    KZ150210    PZC72205.1    NWSH01001280    PCG71865.1    AGBW02009209    OWR51350.1    KQ459337    KPJ01410.1    AP017486    BBB06745.1    JTDY01003872    KOB68896.1    RSAL01000133    RVE46322.1    GDQN01003721    JAT87333.1    KQ459597    KPI95155.1    KZ150156    PZC72781.1    AGBW02013553    OWR43219.1    KQ460970    KPJ10200.1    KK852777    KDR16765.1    RSAL01000061    RVE49616.1    ODYU01003405    SOQ42119.1    BABH01027343    NEVH01007399    PNF35887.1    GBYB01002786    JAG72553.1    NNAY01000597    OXU27491.1    PNF35889.1    QOIP01000003    RLU24714.1    KQ971352    EFA07500.2    GEBQ01032000    JAT07977.1    GEDC01010709    JAS26589.1    GL441846    EFN64147.1    JTDY01000494    KOB76926.1    GL452008    EFN78072.1    GECU01032755    JAS74951.1    QCYY01001007    ROT81167.1    NEDP02001349    OWF53385.1    KQ977696    KYN00573.1    ABJB010294882    DS849465    EEC13387.1    ADTU01004235    GL888122    EGI66970.1    AAGJ04072816    GEFM01003977    JAP71819.1    DS235819    EEB17703.1    KQ978566    KYN30123.1    KQ414596    KOC70027.1    KK107151    EZA57238.1    GBBI01004781    JAC13931.1    GFWV01022880    MAA47607.1    GL767043    EFZ14278.1    GECL01001267    JAP04857.1    GFAC01001897    JAT97291.1    GGLE01001799    MBY05925.1    MWRG01025644    PRD21566.1    GEDV01007350    JAP81207.1    GDRN01084741    GDRN01084740    GDRN01084739    JAI61450.1    GFPF01006695    MAA17841.1    KL411261    KFR05171.1    KK501366    KFP14354.1    JH004146    EGW10864.1    KL447068    KFO69500.1    BEZZ01000023    GCC23173.1    GACK01001684    JAA63350.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000037510    UP000283053    + More
UP000053240    UP000027135    UP000002358    UP000235965    UP000215335    UP000279307    UP000007266    UP000000311    UP000005203    UP000008237    UP000283509    UP000242188    UP000078542    UP000001555    UP000005205    UP000007755    UP000007110    UP000009046    UP000078492    UP000053825    UP000053097    UP000076420    UP000053283    UP000053119    UP000001075    UP000053760    UP000233040    UP000287033   

PRIDE

D0VEQ2    H9J8F6    G3ILM5   

Pfam

PF06248   Zw10        + More
PF00415   RCC1

Interpro

IPR009361   RZZ-complex_Zw10        + More
IPR000408   Reg_chr_condens       
IPR009091   RCC1/BLIP-II       

SUPFAM

SSF50985   SSF50985       

Gene 3D

2.130.10.30    

ProteinModelPortal

D0VEQ2   A0A2H1VB58   A0A2W1BEG7   A0A2A4JID7   A0A212FC93   A0A194Q8W0   + More
A0A2Z5U748   A0A0L7L0Q8   A0A437B763   A0A1E1WK00   A0A194PVK0   A0A2W1BEN9   A0A212EP10   A0A0N1PFC5   A0A067R1H8   A0A437BGP5   A0A2H1VMR4   H9J8F6   K7IZY4   A0A2J7R4X7   A0A0C9R7R5   A0A232F9F2   A0A2J7R4Y7   A0A3L8DW78   D6WSG2   A0A1B6K948   A0A1B6DLN4   E2AR01   A0A088ADK1   A0A0L7LNX8   E2C1W0   A0A1B6HJZ5   A0A423TXK0   A0A210QXB8   A0A195CIN0   B7Q3G5   A0A158NYR6   F4WFS7   W4XLH6   A0A131XXS9   E0VWF2   A0A151JRX3   A0A0L7RGC3   A0A026WMT4   A0A2C9LLH4   A0A2C9LLF9   A0A023EY20   A0A293MPL1   E9IYQ5   A0A0V0GA94   A0A1E1XDT8   A0A2R5L8Y8   A0A2P6K5G4   A0A131YQJ5   A0A0P4W4M1   A0A224YTD2   A0A091WUP7   A0A091J057   G3ILM5   A0A091FFU8   A0A2K5PQ56   A0A401RYD7   L7MH70   A0A2K5PQ47  

KEGG

101736515    K11578 protein transport protein DSL1/ZW10 | (RefSeq) CPH41; centromere/kinetochore protein zw10-lik

GO

GO:0000278   GO:0005634   GO:0000775   GO:1990423   GO:0006888   GO:0005737   GO:0007094   GO:0065003   GO:0007080   GO:0007093   GO:0070939   GO:0005828   GO:0000132   GO:0000922   GO:0034501   GO:0007030   GO:0007096   GO:0005829   GO:0007067   GO:0006508   GO:0019012   GO:0051603   GO:0030145   GO:0006412   GO:0016876   GO:0043039  

Length:

725

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.13909

Exp number, first 60 AAs:

0.00039

Total prob of N-in:

0.00013

outside

1  -  725

 

 

Pi

280.160718

Theta

194.193872

Tajima's D

1.188485

CLR

0.635527

CSRT

0.715264236788161

Interpretation

Uncertain