SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08494
Pre Gene Modal
BGIBMGA009344
Annotation
putative_cuticle_protein_CPH41_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.971
 

Sequence

CDS
ATGATGTACCTGCAAAGTTTTGGTTTGGTCCCCGTATCGAAGAACTCCGAGACAGCCATGACCAGAAAAAAGATGGTTTTCTTTAAAAGGAAACGACAATTGAACCCGTATTATTCTGGTTACAGCCCGAGGCCGGGGAAGCCGCTGAAAGGGGTGATATACGGGGACCAAGAGACCGACGAGAGCCACAGCCATCCCAGAGTTGTCACTAAAATAAAACATCATCATCATCACCATCACCACAGATACATTAAAACCGTCGAGAAACCAGTGAAAGTTCCATATAAGGTGGAAATACCGAAACCCTATCCTGTGACGGTTGAGAAGAAGGTCCCATATCCAGTGGAGAAAATAAAATTCGTCGACAAGCCAGTACCATATCCCGTTACCGTAGAAAAAAGGATTCCCTACCCTATCGGTATAAAAGTTCCTCATCCGGTCCCGGTGAAGGTTGTCGAAAAGGAATACGTCCCAAAGCCTTACCCGATTGTTCATCACGTTCCTGTTGTGAAACATGTGCAAGTGAAGGTTCCGCATCCGGTGCCTGTGCCCGTGGAAAAAAAGGTTCCCTACCCTGTTGAAGTCAAAGTACCGGTAGACAGACCCGTACCGGTTCGTGTGACGGTCGAGAAAAAAGTACCGTACCCAGTTCCAGTCAAAGTTTTAGTCCCGCAACCGTATCCGGTGGAAACTAAAGTGCCTTATCCGGTAGAAGTCAAAGTTAAGGAGCCTGTCGAAGTTATAAGGCACGTCCCTGTAAAAGTTCCAGTGCCGCAGCCGTATCCCGTAAAAGTGCCTGTAAGAGTAACCGTGGAAAAGAAGGTACCGTACCCAGTGGAGGTTGAAAAGAAGATACCGGTGCCAGTTGAAGTTTACATACCGCAAAAAGTAGAGGTCGAGAAGAAAATACCCGTTTACGTACCTAAACCTTACCCGGTGGAGAAGAAGGTACCAGTGCCGGTCAAAGTGCCTTATCCTGTAAAAGTTCCGGTTCAAGTGCCCATCGAAGTGCCGATTTACATTCACCATCCTTATCAAATCGAAAGTGCTGATTATATAAGTAATGTGCAGCAATACGATCCGCAGAACGTCGGTCAATATTTTTCTAACATTGCCAGTCAATTTTTTTCTAATACTAACAAGGGGGAACAGCGGATCTTTGGCACAATTTCAGCAGAAGTATCAACAAATTCGCCTCAACACACGGTCACTGCTCACGGTAATTCAGGATTTGCAGGTTTTCACTCTCGATCCGGCACTGATACACTAACTACGACGGCAGCCACGACCATATAA
Protein
MMYLQSFGLVPVSKNSETAMTRKKMVFFKRKRQLNPYYSGYSPRPGKPLKGVIYGDQETDESHSHPRVVTKIKHHHHHHHHRYIKTVEKPVKVPYKVEIPKPYPVTVEKKVPYPVEKIKFVDKPVPYPVTVEKRIPYPIGIKVPHPVPVKVVEKEYVPKPYPIVHHVPVVKHVQVKVPHPVPVPVEKKVPYPVEVKVPVDRPVPVRVTVEKKVPYPVPVKVLVPQPYPVETKVPYPVEVKVKEPVEVIRHVPVKVPVPQPYPVKVPVRVTVEKKVPYPVEVEKKIPVPVEVYIPQKVEVEKKIPVYVPKPYPVEKKVPVPVKVPYPVKVPVQVPIEVPIYIHHPYQIESADYISNVQQYDPQNVGQYFSNIASQFFSNTNKGEQRIFGTISAEVSTNSPQHTVTAHGNSGFAGFHSRSGTDTLTTTAATTI

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
431
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00115
outside
1  -  431
 
 

Population Genetic Test Statistics

Pi
192.786447
Theta
189.229259
Tajima's D
0.059157
CLR
42.649431
CSRT
0.381530923453827
Interpretation
Uncertain
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