SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08493  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA009355
Annotation
hypothetical_protein_KGM_13233_[Danaus_plexippus]
Full name
UPF0587 protein GA18326       + More
UPF0587 protein CG4646      
CXXC motif containing zinc binding protein      
Alternative Name
UPF0587 protein C1orf123 homolog
Location in the cell
Cytoplasmic   Reliability : 3.055
 

Sequence

CDS
ATGGTGAAAATCGCACTTCAAATTAAAGCCACACTAGAATCTATAGAAAAATTATATACGAACCATCCACACTATCAATGGTTCTTAAAATTAAAATGCGGCAGTTGCGGTGAAGTGTCCGAGAAGTTTCATGATCTCACTGAAGCCGATAGAGTTCCGCAGAAGCACAACCGGTCTGAAACTAATTTGCTAATAAAATGTAAGCTTTGCTCGAGAGAAAACAGCATCGATGTAATTGAGGGCAGCAATGGGAAATTCACAAGTGACGACGGAAACAAATTTAAGACCATAGTGACGTTTGACTGTAGAGGGGTAGAACCTGTTGACTTTGAACCAAAATCAGGATGGATTGCCGAAGCTGAGAATAATGGGAAGAAATTTGAGGATGTGGACTTAACTGAGAAAGAGTGGGTGGACTATGATGAGAAGAACCAGGCATCGGTTGGTGTTTACGAACTAGAGTGGCAGTTCATTAAAGTCAAATGA
Protein
MVKIALQIKATLESIEKLYTNHPHYQWFLKLKCGSCGEVSEKFHDLTEADRVPQKHNRSETNLLIKCKLCSRENSIDVIEGSNGKFTSDDGNKFKTIVTFDCRGVEPVDFEPKSGWIAEAENNGKKFEDVDLTEKEWVDYDEKNQASVGVYELEWQFIKVK

Summary

Similarity
Belongs to the UPF0587 family.
Keywords
Complete proteome   Metal-binding   Reference proteome   Zinc  
Feature
chain  UPF0587 protein GA18326
EMBL
BABH01027068    GDQN01009083    JAT81971.1    AGBW02009209    OWR51348.1    JTDY01003872    + More
KOB68895.1    KQ460144    KPJ17466.1    ODYU01001595    ODYU01001596    SOQ38035.1    SOQ38042.1    NWSH01001280    PCG71867.1    RSAL01000133    RVE46320.1    KZ150210    PZC72203.1    AP017486    BBB06746.1    LADI01013769    KPJ20773.1    GAIX01013465    JAA79095.1    GGFM01005876    MBW26627.1    GGFJ01010096    MBW59237.1    GAMD01002318    JAA99272.1    GGFJ01010138    MBW59279.1    KQ971338    EFA01755.2    ADMH02001019    ETN64411.1    GGFK01012181    MBW45502.1    KQ459337    KPJ01412.1    AAAB01008978    EAA13645.4    APCN01002747    UFQT01001435    SSX30559.1    AXCN02000308    GFDL01010139    JAV24906.1    CH477202    EAT48118.1    UFQS01001190    UFQT01001190    SSX09598.1    SSX29394.1    AXCM01000624    JXUM01130316    KQ567562    KXJ69368.1    CH963849    EDW74597.1    DS232276    EDS38946.1    CH902619    EDV36447.1    GAMC01002489    JAC04067.1    GAPW01005224    JAC08374.1    GDHF01011139    JAI41175.1    CH479181    EDW32293.1    CM000071    GEZM01046871    JAV76981.1    GAKP01004053    JAC54899.1    AE013599    AHN56180.1    AY119205    CH480816    EDW47690.1    CM000362    CM002911    EDX06894.1    KMY93444.1    GDAI01001076    JAI16527.1    CH933808    EDW10611.1    GANO01000840    JAB59031.1    CH940648    EDW60549.1    CH954179    EDV56195.1    JXJN01012711    CCAG010008998    BT149843    AFK83751.1    CM000158    EDW90649.1    OUUW01000001    SPP75660.1    JRES01000335    KNC32193.1    APGK01036393    BT128138    KB740939    KB632013    AEE63099.1    ENN77746.1    ERL88043.1    AJVK01024049    GFDF01009734    JAV04350.1    GFDF01009735    JAV04349.1    CH916375    EDV98176.1    GAPW01005543    JAC08055.1    JH431834    BC106465    KB031032    ELK06169.1    KL890319    KGL77584.1    AWGT02000029    OXB82096.1    AADN05000647    JW877816    AFP10333.1    AMGL01001579    AAGW02002666    AGTO01011303    GG666662    EEN45158.1   
Pfam
PF05907   DUF866        + More
PF00520   Ion_trans
PF11502   BCL9
Interpro
IPR008584   CXXC_Zn_binding_euk        + More
IPR005821   Ion_trans_dom       
IPR027359   Volt_channel_dom_sf       
IPR028823   NALCN       
IPR036236   Znf_C2H2_sf       
IPR024670   BCL9_beta-catenin-bd_dom       
IPR013087   Znf_C2H2_type       
SUPFAM
SSF57667   SSF57667       
Gene 3D
PDB
5ZRT     E-value=1.70848e-42,     Score=429

Ontologies

Topology

Length:
161
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.23756
outside
1  -  161
 
 

Population Genetic Test Statistics

Pi
188.647106
Theta
179.107714
Tajima's D
0.098609
CLR
0.133903
CSRT
0.397830108494575
Interpretation
Uncertain
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