Silkworm Genome Informatics Database

Gene

KWMTBOMO08488

Pre Gene Modal

BGIBMGA009352

Annotation

odorant-binding_protein_2_precursor_[Bombyx_mori]

Location

Bomo_Chr14(+):10741414-10742178 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.726

CDS

ATGAAGAGCAAAACAAAACGTGCGCGGGAAAATCGTCAGACCGCCAATATGGCCGTGTCGGAAATTTCTAGAATTTTAACGTTTTTAACTATCGTGTCATTCATATACATCGTTTACTCATTTAAGCCGCTCACTAAAGATGAACATATCGAGAGATATAATAAAATGAACGAAGACATTGAACCGTTTAGAAAAAATTTGACAGAATGCGCTCGTCAAGTCAAAGCTTCCATGGCGGACGTCGAGAAGTTTCTTAAACGAATACCACAGTCGAATATGGAGGGGAAATGTTTCGTGGCTTGCATTCTCAAACGGAATTCGCTTATAAAAAACAATAAATTGAGCCAGGAGAATCTTCTTGAAGTAAACAGGGCTGTGTACGGTGACGACAGCGAAGTTATGTCCCGCCTCAAGACAGCCATTTTAGAATGTTCAAAAATCGTTGAAGATATATTTGAAATTTGCGAATACGCTTCAGTTTTCAACGATTGCATGCATATGAAAATGGAACATATACTCGATAAAATAACTATGGAAAGAAGGATGGAGGCTTTAGGGCAGATGTCTTCAAATCCCGATGAATGGAGCGAGGAAGAAGATGAAATGTTAAAACTTGTTAAAGATGAACTATAA

Protein

MKSKTKRARENRQTANMAVSEISRILTFLTIVSFIYIVYSFKPLTKDEHIERYNKMNEDIEPFRKNLTECARQVKASMADVEKFLKRIPQSNMEGKCFVACILKRNSLIKNNKLSQENLLEVNRAVYGDDSEVMSRLKTAILECSKIVEDIFEICEYASVFNDCMHMKMEHILDKITMERRMEALGQMSSNPDEWSEEEDEMLKLVKDEL

Uniprot

B8ZWK2 A0A0U3A917 A0A2H1VB19 A0A2H1WR04 A0A2A4JW06 A0A0N1IIQ9 + More
A0A2W1B912 M9YSD7 A0A2Z5U742 A0A0L7LJL1 A0A212ERS7 A0A2K8GKN5 A0A2H1V099 A0A194QD85 A0A1B0VDN5 A0A1J1IFF3 D4AHN1 A0A1J1IKT8 A0A0P0UVK3

Pubmed

19121390 19371749 26657286 26354079 28756777 26227816 + More
22118469 28736530

EMBL

BABH01027061 FM876235 CAS90126.1 KP975120 ALT31639.1 ODYU01001596 + More
SOQ38039.1 ODYU01010420 SOQ55510.1 NWSH01000509 PCG75966.1 KQ460144 KPJ17462.1 KZ150210 PZC72199.1 KC492500 AGK24579.1 AP017487 BBB06749.1 JTDY01000869 KOB75615.1 AGBW02012943 OWR44192.1 KX585303 ARO70196.1 ODYU01000084 SOQ34239.1 KQ459337 KPJ01416.1 KT070562 AMR99730.1 CVRI01000047 CRK97185.1 AB521988 BAI82441.1 CVRI01000052 CRK99702.1 LC042107 BAS69441.1

Proteomes

UP000005204 UP000218220 UP000053240 UP000037510 UP000007151 UP000053268 + More
UP000183832

PRIDE

B8ZWK2

Pfam

PF01395 PBP_GOBP + More
PF00135 COesterase

Interpro

IPR006170   PBP/GOBP        + More
IPR036728   PBP_GOBP_sf
IPR002018   CarbesteraseB
IPR029058   AB_hydrolase
IPR012677   Nucleotide-bd_a/b_plait_sf
IPR035979   RBD_domain_sf
IPR039884   R3HC1/R3HCL

SUPFAM

SSF47565   SSF47565        + More
SSF53474   SSF53474
SSF54928   SSF54928

Gene 3D

1.10.238.20 3.40.50.1820 3.30.70.330

ProteinModelPortal

B8ZWK2 A0A0U3A917 A0A2H1VB19 A0A2H1WR04 A0A2A4JW06 A0A0N1IIQ9 + More
A0A2W1B912 M9YSD7 A0A2Z5U742 A0A0L7LJL1 A0A212ERS7 A0A2K8GKN5 A0A2H1V099 A0A194QD85 A0A1B0VDN5 A0A1J1IFF3 D4AHN1 A0A1J1IKT8 A0A0P0UVK3

PDB

1P28 E-value=0.0394847, Score=83

KEGG

100286760 no KO assigned | (RefSeq) Obp2; odorant-binding protein 2

GO

GO:0005549 GO:0016021 GO:0003676 GO:0008270 GO:0015074 GO:0006370 GO:0019012 GO:0051603 GO:0030145 GO:0006412 GO:0016876 GO:0043039

PANTHER

PTHR21678

Length:

210

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

20.05232

Exp number, first 60 AAs:

20.05101

Total prob of N-in:

0.99465

POSSIBLE N-term signal

sequence

inside

1 - 20

TMhelix

21 - 40

outside

41 - 210

Pi

246.431748

Theta

212.158693

Tajima's D

0.508603

CLR

0

CSRT

0.514074296285186

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics