Gene

KWMTBOMO08476

Annotation

PREDICTED:_uncharacterized_protein_LOC105841278_[Bombyx_mori]

Location

Bomo_Chr14(+):10571067-10572978      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.723 Nuclear   Reliability : 1.038

CDS

ATGTTTAGGTGCATTCTGCTGGATCCAGAGCAACGTTCGCTGCAACTTATACTATTGCGCGACTCACCACATGAAAACATCAAGTGTATTGAACTAAATACAGTTACATATGGTTTTAAATGCTCAACCTATCTAGCCACTAGGTTTCTGACTGAACTAGCACACAGGTACGAGGCTGACTTCCCAGCGGCGTCTTTCATTCTGCAAAATCAGACATACTGCGACGACATTCTCACTTCCAGTAACCCTTTGGAGTCTTTATCTGAAATGAAAGATCAATTAATACAATTACTAGCTCTGGGAGGGTTTCAGGCACATAAATGGTCTTCAAATGCTCCTCAAATCCTGCAAAACATACCTAGAGATAAACAACATTTTGATGATGTCGATATACAAAAACAAAATTACTATATAAAAACATTAGGGGTCACATATAATACTAATACTGACACATTCAAAATATCAACTCCTAACCAACAGGGGCCCATGCCTCTCACAAAACGCGAAATCGTTAGTTTTGTCGCCAGATTTTACGACCCACTGGGTCTAGCTGGACCTATCACAGTTTCTGCAAAGATACTTATTCAGAAACTATGGGCAGCTCAAATCAACTGGGACTCACAATTGCCTAATGATCTTAAAACAGCTTGGTTAGAGTTCTATAATAATTTACATAGCATGCAGCCTATACACATCACTAGGAATGTCACTATGCAGCAGGCAGCCAGCTCACACCTGATCGGCTATGCAGATGCCAGCTGTGCAGCATATGGTTACTGTCTTTATCTGCGCGAAGTCGACAAGGTAGGTAAGGTCAAGGTCACTTTACTCTGTTCGAAATCAAGACTAGCTCCATTAAGCCAGAAACTAACAACACCTAGACTTGAGCTAAATGCCGTGCTTTTACTAGCTAAACTAGTACACAGAGTATATTCATTGTTATCTCTAAAAATACATATTGATGATGTATCTCTTTTCTCTGACTCTCAAATAGTCCTGGCGTGGTTTAAGCTAGATATTACAAAACTAAATGCCTATGTAGCAAACAGAGTAAAGACGATCTTGGAATTTACTAAAAATTTCCTCTGGACATACGTGAGGACGGGAGACAACCCTGCAGACTGTCTAAGCCGCGGCGCGCAGCCCAACGAGCTCGAGCACAACACGCTGTGGTGGCAGGGACCCGGTTACTTACATAACAGTAACTACTCTCCGACAAAAGTAAATATTAAAATATCAGATAAAATACCTGAGCTGAAGTCTGGTGATGCTGCTGATCCTCTGCCCCTCTCGAGTGCTATGGTCAAAAATTGA

Protein

MFRCILLDPEQRSLQLILLRDSPHENIKCIELNTVTYGFKCSTYLATRFLTELAHRYEADFPAASFILQNQTYCDDILTSSNPLESLSEMKDQLIQLLALGGFQAHKWSSNAPQILQNIPRDKQHFDDVDIQKQNYYIKTLGVTYNTNTDTFKISTPNQQGPMPLTKREIVSFVARFYDPLGLAGPITVSAKILIQKLWAAQINWDSQLPNDLKTAWLEFYNNLHSMQPIHITRNVTMQQAASSHLIGYADASCAAYGYCLYLREVDKVGKVKVTLLCSKSRLAPLSQKLTTPRLELNAVLLLAKLVHRVYSLLSLKIHIDDVSLFSDSQIVLAWFKLDITKLNAYVANRVKTILEFTKNFLWTYVRTGDNPADCLSRGAQPNELEHNTLWWQGPGYLHNSNYSPTKVNIKISDKIPELKSGDAADPLPLSSAMVKN

Similarity

Belongs to the synaptobrevin family.

Uniprot

A0A1Y1JX04   A0A3S2P870   A0A1Y1MY22   A0A0A9XBI3   A0A182H647   A0A224XGH3   + More
A0A1B6MFR0   A0A2S2QWS1   A0A0J7KBV8   X1WVF9   A0A1Y1N4T1   A0A1Y1MF14   A0A0P6K153   A0A1Y1MIB7   A0A0P6J6G2   A0A1W7R6J0   A0A1B6KZV2   A0A1B6MUZ9   X1X9U0   A0A1W7R6J2   A0A224XG39   W8ANH7   A0A1Y1MTT1   A0A2L2YT61   A0A3S2TB02   A0A1W7R6N3   A0A2S2PNZ4   X1XET3   X1WKA2   A0A0J7N314   J9L9H5   A0A2S2NPW7   E9J9Y8   A0A1B6GGX5   A0A0J7K7S0   J9JUM9   W4VR47   A0A087UK63   A0A0J7JX13   J9LHB7   A0A2L2YSX3   X1XU46   X1X412   X1X8C2   A0A2A4IUY1   A0A0J7K907   A0A3L8DC69   J9KV52   A0A1W7R6A8   A0A0A9XDK6   A0A2A4IUL3   A0A0J7KGI8   A0A2S2NDE3   A0A2S2NZ32   X1WPD9   J9JUK4   K7JBZ1   A0A182I0G9   A0A023F096   A0A0J7K2F3   A0A1Y1LAD7   K7JBZ2   A0A0J7KBZ0   X1X4W4   A0A1W7R6I7   A0A2S2P1X6   A0A0J7MVH5   A0A1W7R6S6   A0A1Y1L369   A0A3Q0JNQ0   A0A0A9X2P1   W8BU98   A0A2S2QTX5   A0A0J7JWZ4   A0A1S3DCY4   X1WWR4   A0A0A9Z7S5   J9JUA7   A0A3Q0JHI8   A0A1B6GMH9   A0A1B6LDH0   J9L3C9   X1WNM7   A0A182YS31   X1WNT8   A0A1U8N896   A0A0J7K7L1   A0A2S2N8W8   A0A0A9W8L8   J9M7R2   J9K0E7   A0A146LBU6   A0A023EZC2   A0A2S2PC00   A0A023EZB2   A0A226D417   A0A437AV42   A0A3Q0JGS5   A0A0A9YD88   A0A0J7KB34  

Pubmed

28004739    25401762    26483478    26999592    24495485    26561354    + More
21282665    30249741    20075255    25474469    25244985    25893780    26823975   

EMBL

GEZM01103137    GEZM01103136    JAV51536.1    RSAL01000210    RVE44241.1    GEZM01018702    + More
JAV90048.1    GBHO01029149    JAG14455.1    JXUM01113346    KQ565681    KXJ70776.1    GFTR01008866    JAW07560.1    GEBQ01005223    JAT34754.1    GGMS01012379    MBY81582.1    LBMM01009941    KMQ87772.1    ABLF02026240    ABLF02055027    GEZM01012999    JAV92824.1    GEZM01033155    JAV84392.1    GDUN01000087    JAN95832.1    GEZM01033158    GEZM01033157    JAV84390.1    GDUN01000088    JAN95831.1    GEHC01000877    JAV46768.1    GEBQ01022991    GEBQ01006185    JAT16986.1    JAT33792.1    GEBQ01007199    GEBQ01000222    JAT32778.1    JAT39755.1    ABLF02025690    GEHC01000894    JAV46751.1    GFTR01008874    JAW07552.1    GAMC01020552    JAB86003.1    GEZM01021505    JAV88969.1    IAAA01049856    LAA11259.1    RSAL01001808    RVE40681.1    GEHC01000865    JAV46780.1    GGMR01018506    MBY31125.1    ABLF02041762    ABLF02011640    ABLF02018832    ABLF02018833    ABLF02047353    ABLF02057892    ABLF02066963    LBMM01011051    KMQ87060.1    ABLF02008636    ABLF02065931    GGMR01006575    MBY19194.1    GL769615    EFZ10365.1    GECZ01008071    JAS61698.1    LBMM01012392    KMQ86241.1    ABLF02004035    ABLF02004036    ABLF02004037    ABLF02004038    ABLF02008018    ABLF02008020    ABLF02012635    ABLF02061171    GANO01004788    JAB55083.1    KK120200    KFM77752.1    LBMM01024134    KMQ82612.1    ABLF02022040    ABLF02056888    IAAA01040237    LAA10530.1    ABLF02003339    ABLF02058001    ABLF02008635    ABLF02023121    ABLF02065930    NWSH01006923    PCG63188.1    LBMM01011516    KMQ86784.1    QOIP01000010    RLU18065.1    ABLF02015610    ABLF02015611    ABLF02026843    ABLF02057498    ABLF02060119    ABLF02062416    ABLF02064495    GEHC01000946    JAV46699.1    GBHO01028449    JAG15155.1    PCG63186.1    LBMM01007859    KMQ89359.1    GGMR01002187    MBY14806.1    GGMR01009854    MBY22473.1    ABLF02006985    ABLF02039606    AAZX01023184    APCN01002077    GBBI01004276    JAC14436.1    LBMM01016286    KMQ84479.1    GEZM01066274    JAV68017.1    LBMM01009964    KMQ87756.1    ABLF02043036    GEHC01000869    JAV46776.1    GGMR01010723    MBY23342.1    LBMM01016285    KMQ84480.1    GEHC01000870    JAV46775.1    GEZM01066272    JAV68024.1    GBHO01028617    JAG14987.1    GAMC01009674    JAB96881.1    GGMS01011369    MBY80572.1    LBMM01024307    KMQ82592.1    ABLF02058750    GBHO01004196    JAG39408.1    ABLF02041650    GECZ01006169    JAS63600.1    GEBQ01018232    JAT21745.1    ABLF02042806    ABLF02009451    LBMM01012188    KMQ86362.1    GGMR01000961    MBY13580.1    GBHO01039838    GBHO01006034    JAG03766.1    JAG37570.1    ABLF02005251    ABLF02055296    GDHC01014057    JAQ04572.1    GBBI01004139    JAC14573.1    GGMR01014351    MBY26970.1    GBBI01004140    JAC14572.1    LNIX01000036    OXA39969.1    RSAL01000392    RVE41994.1    GBHO01020765    GBHO01014531    JAG22839.1    JAG29073.1    LBMM01010405    KMQ87487.1   

Proteomes

UP000283053    UP000069940    UP000249989    UP000036403    UP000007819    UP000054359    + More
UP000218220    UP000279307    UP000002358    UP000075840    UP000079169    UP000076408    UP000189702    UP000198287   

Pfam

PF05585   DUF1758        + More
PF17921   Integrase_H2C2
PF18701   DUF5641
PF05380   Peptidase_A17
PF00665   rve
PF03564   DUF1759
PF00078   RVT_1
PF14291   DUF4371
PF05485   THAP
PF09337   zf-H2C2
PF02945   Endonuclease_7
PF13774   Longin

Interpro

IPR008042   Retrotrans_Pao        + More
IPR012337   RNaseH-like_sf       
IPR001584   Integrase_cat-core       
IPR041588   Integrase_H2C2       
IPR036397   RNaseH_sf       
IPR021109   Peptidase_aspartic_dom_sf       
IPR008737   Peptidase_asp_put       
IPR040676   DUF5641       
IPR005312   DUF1759       
IPR000477   RT_dom       
IPR001878   Znf_CCHC       
IPR001995   Peptidase_A2_cat       
IPR001969   Aspartic_peptidase_AS       
IPR036291   NAD(P)-bd_dom_sf       
IPR025398   DUF4371       
IPR020831   GlycerAld/Erythrose_P_DH       
IPR020828   GlycerAld_3-P_DH_NAD(P)-bd       
IPR017907   Znf_RING_CS       
IPR001606   ARID_dom       
IPR006612   THAP_Znf       
IPR036875   Znf_CCHC_sf       
IPR015416   Znf_H2C2_histone_UAS-bd       
IPR038563   Endonuclease_7_sf       
IPR004211   Endonuclease_7       
IPR011012   Longin-like_dom_sf       
IPR010908   Longin_dom       

SUPFAM

SSF53098   SSF53098        + More
SSF50630   SSF50630       
SSF51735   SSF51735       
SSF57756   SSF57756       
SSF64356   SSF64356       

Gene 3D

2.40.70.10     3.30.420.10     3.40.1800.10    

ProteinModelPortal

A0A1Y1JX04   A0A3S2P870   A0A1Y1MY22   A0A0A9XBI3   A0A182H647   A0A224XGH3   + More
A0A1B6MFR0   A0A2S2QWS1   A0A0J7KBV8   X1WVF9   A0A1Y1N4T1   A0A1Y1MF14   A0A0P6K153   A0A1Y1MIB7   A0A0P6J6G2   A0A1W7R6J0   A0A1B6KZV2   A0A1B6MUZ9   X1X9U0   A0A1W7R6J2   A0A224XG39   W8ANH7   A0A1Y1MTT1   A0A2L2YT61   A0A3S2TB02   A0A1W7R6N3   A0A2S2PNZ4   X1XET3   X1WKA2   A0A0J7N314   J9L9H5   A0A2S2NPW7   E9J9Y8   A0A1B6GGX5   A0A0J7K7S0   J9JUM9   W4VR47   A0A087UK63   A0A0J7JX13   J9LHB7   A0A2L2YSX3   X1XU46   X1X412   X1X8C2   A0A2A4IUY1   A0A0J7K907   A0A3L8DC69   J9KV52   A0A1W7R6A8   A0A0A9XDK6   A0A2A4IUL3   A0A0J7KGI8   A0A2S2NDE3   A0A2S2NZ32   X1WPD9   J9JUK4   K7JBZ1   A0A182I0G9   A0A023F096   A0A0J7K2F3   A0A1Y1LAD7   K7JBZ2   A0A0J7KBZ0   X1X4W4   A0A1W7R6I7   A0A2S2P1X6   A0A0J7MVH5   A0A1W7R6S6   A0A1Y1L369   A0A3Q0JNQ0   A0A0A9X2P1   W8BU98   A0A2S2QTX5   A0A0J7JWZ4   A0A1S3DCY4   X1WWR4   A0A0A9Z7S5   J9JUA7   A0A3Q0JHI8   A0A1B6GMH9   A0A1B6LDH0   J9L3C9   X1WNM7   A0A182YS31   X1WNT8   A0A1U8N896   A0A0J7K7L1   A0A2S2N8W8   A0A0A9W8L8   J9M7R2   J9K0E7   A0A146LBU6   A0A023EZC2   A0A2S2PC00   A0A023EZB2   A0A226D417   A0A437AV42   A0A3Q0JGS5   A0A0A9YD88   A0A0J7KB34  

KEGG

105841278    no KO assigned | (RefSeq) uncharacterized LOC105841278

GO

GO:0015074   GO:0003676   GO:0008270   GO:0016620   GO:0004190   GO:0003677   GO:0016021  

Length:

437

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0956900000000001

Exp number, first 60 AAs:

0.0008

Total prob of N-in:

0.00165

outside

1  -  437

 

 

Pi

69.941864

Theta

176.289695

Tajima's D

-1.815481

CLR

1280.798329

CSRT

0.0260986950652467

Interpretation

Uncertain