Silkworm Genome Informatics Database

Gene

KWMTBOMO08471

Pre Gene Modal

BGIBMGA009426

Annotation

PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_[Bombyx_mori]

Location

Bomo_Chr14(-):10483438-10489456 View in EpiBrowser

Transcription factor

THAP

Location in the cell

Nuclear Reliability : 4.427

CDS

ATGGAAAAAATAAATAAAAGACCACTCTCAAAGAAAGAACTCGAAATATGCATAGAAAATTTAGCGGATCTTTCAGATTTGTCCGAATGCGATGAAGAAGACGATCCTTGTTACGAAAATAGTATCCATTCTCCTTCTGTACACCTAGACCAACCAGATGCTTGCCTAGTAGAACAACGTCTTGAAGAAATGTTTGGCTTCGAAGAAACTTGTGATGACTATATCGTACTAAATGAACCAATAACAGAGCCTGATAAATTATTATCAATTCTAAGTGAAGATTTATCGCCCACGATTCCCATCAATCACTTACCGGACATTTCAGTAAACGACTTTTTGGAGGATGATGAACCAGAATCTAACACTGTACGCAGAGATCGCTCACAACTACGACAATGGGAGGTAGAAGATATAAGTCATGAAATTCCAAATTTTGGAAAGCGTTTCAAGCCCGTGGTTACTGACACACATAAAACTTCGCCTATAACTATATTTGACCGTTTTTTTCCTGACATATTGATATTAATATTAGCCGAACAAACCAATAAATACGCCAGCCAGAGAAACAGCGCTCAATGGAAACCAGTTACTGAGAAAGATATAAGAGCCTATTTGGGAGTTTTAATTCTGATGGGATTGAACCCTCTTCCAGATATGGAACTCTATTGGTCGACCGATACATTTTACTATAACAAAGAAATGGCGCAAGTTTTTCCACTCACTAGATTTAAAAAAATCACTGAAAATCTACATTTAAATGATAACCAAACCCAACCATCAAGAGATTCTCCTGATTATGATAAATTACACAAGGTCAGACCTCTAATAATAGAATTAAACAAAATATATCAGAAGGAAGCTTGTAATTCCCAAATCCAATCAGTTGACGAATGTATGGTCAAATTTAAAGGACGCAGCTCCTTAAAACAATATATGCCCAAAAAAACCATTAAAAGGGGTTTTAAAGTCTGGGCGAGATGCGACGCAAAAACCGGCTATTTATATCAATTTGAAATTTATACTGGTAAAGGCGACAGCATTGAAAACGAAGGTCTCGGATACAATGTCGTTATGAAATTATGCAATAATGTCCCTAGAAACACTTTGGTTGCCTTTGATAATTTTTTCACGAGCTGTAATCTAATGGAAGATCTCTACGACAAAGGTATATACGCAGTGGGAACTGTACGATCGAATAGAAAAGATCTTCCCGACATGATTAAAAAAAAGCAGCCAAAATCATTAAGACTAGCAAAACACGAATTTGCTGCTGTTACAGCGGAGCCCATAGTAGCCATTAAGTGGCTCAATACTAAAAAAGTGGCAGTCCTCACTACGGCTCATCAACCACGTGATATACAGTACGTAAAAAGGACGCAAAAGGATGGCTCAAGAAAAGAGATACTTTGCCCAAAAGCTATTGCAGAATATACACTTTCCATGGATGGAGTTGATCTATTCGATCACTTTAGATCTTCATACCCAATAAACAGAAAGTCAAGGAAGAAAGATAGCATCTCATTTCACACCTATCCGAAAGATCCAAAGATAAAAGAAATGTGGATAAATGCGACAGGAAGGGGTCCAAGCTGGTTCCCAACAAAAAATCACACCATATGCTCGTCCCACTTTGAGCCAAAGTGCTTTCAACCATTGAAGAAAGTTCGTTGGCTCTTCGAATGGTCGGTCCCAACATTGAAGTTGCGTATGGTATTGATGAATTATATGGAACCTTCCACATCCAAAGTGTGCTTTTATTCTGAATTGGATAAAAAGGATCCTAATTTGACGGTTGCTTTAAAACTTCCAACCGGAACCGAATCACAAAATCTCACTGGTGAAAAAAACGATAATTCGGAAAATACTGCTCCAACGTCTACAATATATGGTATCGATACAAACTTTAATGCTCGACAAAATAGCAGTAATGCTAGTTCGAGATAG

Protein

MEKINKRPLSKKELEICIENLADLSDLSECDEEDDPCYENSIHSPSVHLDQPDACLVEQRLEEMFGFEETCDDYIVLNEPITEPDKLLSILSEDLSPTIPINHLPDISVNDFLEDDEPESNTVRRDRSQLRQWEVEDISHEIPNFGKRFKPVVTDTHKTSPITIFDRFFPDILILILAEQTNKYASQRNSAQWKPVTEKDIRAYLGVLILMGLNPLPDMELYWSTDTFYYNKEMAQVFPLTRFKKITENLHLNDNQTQPSRDSPDYDKLHKVRPLIIELNKIYQKEACNSQIQSVDECMVKFKGRSSLKQYMPKKTIKRGFKVWARCDAKTGYLYQFEIYTGKGDSIENEGLGYNVVMKLCNNVPRNTLVAFDNFFTSCNLMEDLYDKGIYAVGTVRSNRKDLPDMIKKKQPKSLRLAKHEFAAVTAEPIVAIKWLNTKKVAVLTTAHQPRDIQYVKRTQKDGSRKEILCPKAIAEYTLSMDGVDLFDHFRSSYPINRKSRKKDSISFHTYPKDPKIKEMWINATGRGPSWFPTKNHTICSSHFEPKCFQPLKKVRWLFEWSVPTLKLRMVLMNYMEPSTSKVCFYSELDKKDPNLTVALKLPTGTESQNLTGEKNDNSENTAPTSTIYGIDTNFNARQNSSNASSR

Uniprot

A0A2H1W609

EMBL

ODYU01006569 SOQ48520.1

Pfam

PF13843 DDE_Tnp_1_7

Interpro

IPR029526 PGBD

ProteinModelPortal

A0A2H1W609

PDB

2D8R E-value=9.16303e-06, Score=120

KEGG

105841857 no KO assigned | (RefSeq) piggyBac transposable element-derived protein 4-like

GO

GO:0003676 GO:0008270 GO:0005515 GO:0006182 GO:0051603 GO:0030145 GO:0006412 GO:0016876 GO:0043039

Length:

647

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0761599999999999

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00413

outside

1 - 647

Pi

285.210667

Theta

232.275865

Tajima's D

0.712642

CLR

0

CSRT

0.574221288935553

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics