SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08469
Pre Gene Modal
BGIBMGA009428
Annotation
PREDICTED:_uncharacterized_protein_LOC105841855_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.368
 

Sequence

CDS
ATGTCTTTCTCGTTCGGCACACCTTCAAGTGCTCCTGCTACCACAGGACTCGCAGGAGGTTTTAGTTTCGGTACCAACAAACCTGCAACCCCAGGATTTGGCATGACTGCAACATCTCAGCCATCAACAGGCCTTTTTGGGAGTACATCTGCTACTCCAGCGCCCGCATTTGGTACTGCAGGTTTTGGTTCGACAACACCGGCATTTGGTTCGACTACTACACCTGCTTTCGGTGCATCGACCACTCCGGCCTTTGGTACAACAAGTACTCCAGGTTTTGGTTCAACACCCGCTTTTGGAGCTAATTCTGCAGCTCCAGTATTTGGAACCACTACACCGGCCTTCGGTTCAACGGCTCCTACTTTTGGTACAGGGACTTCAGCATTTGGGACAACTACAACACCGGCTTTTGGTACAGGCACTGCTGGGTCAAATTTTAGCCTTGGATCAAATACTTTAGGTGGTTTTGGGACACAGCCAGCTACTACATCAACTACTGGGTTGGGTCTGAGTTTTGGTCTTGGTACAGCAACTACCCAAACAGGGTTTGGACTATTGGGAGCCACTGGTACAGCCACTACATCTAGTAGTTTATTTGGACCTAAGCTTGGTACAACCAGTCTAACTGGTACTCAGCCATCGACATTAGGAACATCAAGCTTCGGGCTTGGAGGAGTTGCACCGGCTACAAGTGGTATTGGTGTGACGAATACTACAGATGCTAAAACTGAGCCACCAAAGCAAACCAAGCTGCCAAATGAGATTTCAACAACAGTGGATTCATTCAAAGAATTTGTCAAGAAACAAAAGTCTCTGAGTTCTGAAGTTATGCGAGTGTCTATCAAGCCACTGCATAAGGTGGCGGGCGAGGCGGCGGTCCTGACGCGCGAGGCGGCGCGCGTGTGCGGCGAAGTGGCGCGTGCGCGCTGCGTGTCGCGCCGCCAGCGAGCCGCCGCCGCCGCCGCGCTCGCCGCCGCCGACACCGTGCTGCGGGACAACGCGGCGCCCGGTTCGGAGCTGGAAGGCATGGCGCCTCCTCAGTACGTGAAGGACCTGATTTCTGAACTTGAACAGCATCTAATAACGTTTAGGAGACAAATGGAAATCGCAGACAAACAGATGCAATCGACACCAAAATTACTGACCGAAAAGGAATTAACACTAGGCATTCGTCGTATGCACGAGTCGCTGGTAGCTCTGGCGGGCCGGCTGCAGACTGTACATTCCCAAGTCGAGGAGCAGCTCCGTCAGTACAAGAACCTGAGGACCTACATACTGAAGGAACCGGCTGCCACGTTTGACCTCCTACAGAACCATAACACAAGCCTAGACCAAATGTTACAAGAGGATGTTAGCGGTAAAAGAAAGTTTAAGTCCACGTTGACCGGTGAAGTGAACAGAGTGAGTGCCGTGCTGGCCGACCCTAGAGCTGCTTTGGGAGGCGTGCACCAGTTGGCCGGGCCGACGCCCTTCAGCTATATCGGGTCCAATCTGACGCTGATTACGAATGTTGATAACAGCGCAACCTCGTGGCCTCCCCATTCGAATCCTCCGCCGCAGACGAATTCCACGTCTGCCTTGCTGTTAACGGGTCCATCTTCGTTCCAGCTTCAGAAGCCGCCCGGCAAACGAGGAAAACAATGA
Protein
MSFSFGTPSSAPATTGLAGGFSFGTNKPATPGFGMTATSQPSTGLFGSTSATPAPAFGTAGFGSTTPAFGSTTTPAFGASTTPAFGTTSTPGFGSTPAFGANSAAPVFGTTTPAFGSTAPTFGTGTSAFGTTTTPAFGTGTAGSNFSLGSNTLGGFGTQPATTSTTGLGLSFGLGTATTQTGFGLLGATGTATTSSSLFGPKLGTTSLTGTQPSTLGTSSFGLGGVAPATSGIGVTNTTDAKTEPPKQTKLPNEISTTVDSFKEFVKKQKSLSSEVMRVSIKPLHKVAGEAAVLTREAARVCGEVARARCVSRRQRAAAAAALAAADTVLRDNAAPGSELEGMAPPQYVKDLISELEQHLITFRRQMEIADKQMQSTPKLLTEKELTLGIRRMHESLVALAGRLQTVHSQVEEQLRQYKNLRTYILKEPAATFDLLQNHNTSLDQMLQEDVSGKRKFKSTLTGEVNRVSAVLADPRAALGGVHQLAGPTPFSYIGSNLTLITNVDNSATSWPPHSNPPPQTNSTSALLLTGPSSFQLQKPPGKRGKQ

Summary

Uniprot
ProteinModelPortal
PDB
5IJO     E-value=5.20904e-07,     Score=130

Ontologies

GO

Topology

Length:
547
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.13447
Exp number, first 60 AAs:
0.048
Total prob of N-in:
0.00320
outside
1  -  547
 
 

Population Genetic Test Statistics

Pi
195.223966
Theta
167.676887
Tajima's D
1.297349
CLR
0.430971
CSRT
0.736813159342033
Interpretation
Uncertain
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